| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626075
Identifier: 116626075
GI number: 116626075
Start: 8844835
End: 8846226
Strand: Direct
Name: 116626075
Synonym: Acid_7033
Alternate gene names: NA
Gene position: 8844835-8846226 (Clockwise)
Preceding gene: 116626074
Following gene: 116626076
Centisome position: 88.75
GC content: 64.73
Gene sequence:
>1392_bases ATGTTAGTTCGACCTGCTCTTCTTACCCTGATCGCGGCATGCTGCGCCCTGGCGCAGGATCCCAATGTATCCATCACTTG GATTGGCCAGTCGTGTTTCAACGTAGCAATTCCGGGAGTCACAACGGTCGTGACGGATCCGCCGGTCGCGTCGGTGGGCT ATACGCTCCCGCCGTTGAATGCCGACGTCGTGACCATTACCCACAATCACACCGATCACAATAACTCCGCCGGGATAGGC GGCAAGTTCACGCTGGTGGATGGCCGGCCCGTCACAGCGCGGCAGGAGGTAACGGCCGCGGGATTGAAATTCGTCATGAT CCCGGGCTTCCACGATAATTCGAACGGCGCCGTGCGGGGACCGAACACCATGATGGTGTGGACCCAGGGCGGAATCAAAT TCGCCCATCTCGGCGATCTCGGCCAGGATCAGCTCACCGCGGCACAACTCGCCGATCTTGCGGGCGTGGACGTTCTGTTC ATCGCTGCCGGTGGATTCTTCACGGTCACGCCCGAACGGGCAGCCGGCTATGTGAACGAGTTGAAGCCGCGCGTGGCGAT TTTGATGCACTACAAGACAGCACTGGGCGGACCGGCACAACTGGCAGGGCTGCCGGCGTCGGCGGCGCCATTTTCGCCGC TGCGGTACAAGCCCGCGACCGTTGTGGTGAACCGCGCGACGCTGCCCGCCTCCACGGAAGTCTGGGCGATGCAACCGGTA TCGGACGCGGCCGTGGCGAACGCCGCCAGTTTCGAGGCGGGCGCGCCGGTTGCGCCGGGGTCGGTGGTCTCGATCTTCGG AAAGTTCACGGCCTCGCAAACCGTGGGCGCAGCGACATACCCGCTGCCCCGAAAGCTCGGCGAGACTGAAGTGCTGATCG ATGGCAAGGCCGCGCCCCTTTACTACGCCTCTCCGGGGCAGGTGAATTTTCAACTACCGGCCGCGCGGGCCGTGGGGCAG GGCCTGGCAGAGGTCCGCGTGGGCGGCCAGCCGGCGGGGCGTGCTCCGGTCACGGTACTCGCCAATGCCGCCGGAATCTT CGGCGCGGTAAATCAGGATGGCCGGGTCAATTCAGCGTCCGCCGCCGCGCGCCGGGGAGAGGTGCTCCACATCTTCGCCA CGGGACTTGGCGCGGCCTCACCTGCCGTGGAAGATGGAGCCGCCGCGCCGTCCCAGCCCCTCGCCAACGGAATCGTAATG CCAAACGTGTTCTTGGGCGGACGTCAACTCGCACCGCTGTTCAACGGACTGGCTCCCGGACTCGCCGGTGTCTGGCAGAT CGACGTGCTGATTCCAGCGGACGCATCCACGGGTCCTGAGATCCCGCTGGTGGTGGAGCATGGAACGACGAGCAATACCG TCACCATCGCGGTCGTGCCTGCCGCACAATAG
Upstream 100 bases:
>100_bases GGCGGAGCGCGGTGGATGCGAAAGGCGCAACCGTAAGGTTCGGCACGGCCGACTTACAAGTTAACTTACCGGGCTTCCGA TCCTGTTGTTTAATCGGGTC
Downstream 100 bases:
>100_bases AGCCATGGTGCGTGAGGACGGACGATTCTGCGATGGCTGCAGCCAGAAGTTGCCGCCGATGGCGAAGCTCGGTCAACAGA CAATGTCGAAGGAAGAGGCA
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MLVRPALLTLIAACCALAQDPNVSITWIGQSCFNVAIPGVTTVVTDPPVASVGYTLPPLNADVVTITHNHTDHNNSAGIG GKFTLVDGRPVTARQEVTAAGLKFVMIPGFHDNSNGAVRGPNTMMVWTQGGIKFAHLGDLGQDQLTAAQLADLAGVDVLF IAAGGFFTVTPERAAGYVNELKPRVAILMHYKTALGGPAQLAGLPASAAPFSPLRYKPATVVVNRATLPASTEVWAMQPV SDAAVANAASFEAGAPVAPGSVVSIFGKFTASQTVGAATYPLPRKLGETEVLIDGKAAPLYYASPGQVNFQLPAARAVGQ GLAEVRVGGQPAGRAPVTVLANAAGIFGAVNQDGRVNSASAAARRGEVLHIFATGLGAASPAVEDGAAAPSQPLANGIVM PNVFLGGRQLAPLFNGLAPGLAGVWQIDVLIPADASTGPEIPLVVEHGTTSNTVTIAVVPAAQ
Sequences:
>Translated_463_residues MLVRPALLTLIAACCALAQDPNVSITWIGQSCFNVAIPGVTTVVTDPPVASVGYTLPPLNADVVTITHNHTDHNNSAGIG GKFTLVDGRPVTARQEVTAAGLKFVMIPGFHDNSNGAVRGPNTMMVWTQGGIKFAHLGDLGQDQLTAAQLADLAGVDVLF IAAGGFFTVTPERAAGYVNELKPRVAILMHYKTALGGPAQLAGLPASAAPFSPLRYKPATVVVNRATLPASTEVWAMQPV SDAAVANAASFEAGAPVAPGSVVSIFGKFTASQTVGAATYPLPRKLGETEVLIDGKAAPLYYASPGQVNFQLPAARAVGQ GLAEVRVGGQPAGRAPVTVLANAAGIFGAVNQDGRVNSASAAARRGEVLHIFATGLGAASPAVEDGAAAPSQPLANGIVM PNVFLGGRQLAPLFNGLAPGLAGVWQIDVLIPADASTGPEIPLVVEHGTTSNTVTIAVVPAAQ >Mature_463_residues MLVRPALLTLIAACCALAQDPNVSITWIGQSCFNVAIPGVTTVVTDPPVASVGYTLPPLNADVVTITHNHTDHNNSAGIG GKFTLVDGRPVTARQEVTAAGLKFVMIPGFHDNSNGAVRGPNTMMVWTQGGIKFAHLGDLGQDQLTAAQLADLAGVDVLF IAAGGFFTVTPERAAGYVNELKPRVAILMHYKTALGGPAQLAGLPASAAPFSPLRYKPATVVVNRATLPASTEVWAMQPV SDAAVANAASFEAGAPVAPGSVVSIFGKFTASQTVGAATYPLPRKLGETEVLIDGKAAPLYYASPGQVNFQLPAARAVGQ GLAEVRVGGQPAGRAPVTVLANAAGIFGAVNQDGRVNSASAAARRGEVLHIFATGLGAASPAVEDGAAAPSQPLANGIVM PNVFLGGRQLAPLFNGLAPGLAGVWQIDVLIPADASTGPEIPLVVEHGTTSNTVTIAVVPAAQ
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47047; Mature: 47047
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRPALLTLIAACCALAQDPNVSITWIGQSCFNVAIPGVTTVVTDPPVASVGYTLPPLN CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEEEECCCCHHCCCCCCCCC ADVVTITHNHTDHNNSAGIGGKFTLVDGRPVTARQEVTAAGLKFVMIPGFHDNSNGAVRG CCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEEEECCEECCCCCCEEC PNTMMVWTQGGIKFAHLGDLGQDQLTAAQLADLAGVDVLFIAAGGFFTVTPERAAGYVNE CCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHCHHHH LKPRVAILMHYKTALGGPAQLAGLPASAAPFSPLRYKPATVVVNRATLPASTEVWAMQPV CCCEEEEEEEEHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCC SDAAVANAASFEAGAPVAPGSVVSIFGKFTASQTVGAATYPLPRKLGETEVLIDGKAAPL CHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCCCCE YYASPGQVNFQLPAARAVGQGLAEVRVGGQPAGRAPVTVLANAAGIFGAVNQDGRVNSAS EEECCCEEEEECCHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCHH AAARRGEVLHIFATGLGAASPAVEDGAAAPSQPLANGIVMPNVFLGGRQLAPLFNGLAPG HHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCEECCCEEECCCCHHHHHHHHCCC LAGVWQIDVLIPADASTGPEIPLVVEHGTTSNTVTIAVVPAAQ CCCEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEECCC >Mature Secondary Structure MLVRPALLTLIAACCALAQDPNVSITWIGQSCFNVAIPGVTTVVTDPPVASVGYTLPPLN CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEEEECCCCHHCCCCCCCCC ADVVTITHNHTDHNNSAGIGGKFTLVDGRPVTARQEVTAAGLKFVMIPGFHDNSNGAVRG CCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEEEECCEECCCCCCEEC PNTMMVWTQGGIKFAHLGDLGQDQLTAAQLADLAGVDVLFIAAGGFFTVTPERAAGYVNE CCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHCHHHH LKPRVAILMHYKTALGGPAQLAGLPASAAPFSPLRYKPATVVVNRATLPASTEVWAMQPV CCCEEEEEEEEHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCC SDAAVANAASFEAGAPVAPGSVVSIFGKFTASQTVGAATYPLPRKLGETEVLIDGKAAPL CHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCCCCE YYASPGQVNFQLPAARAVGQGLAEVRVGGQPAGRAPVTVLANAAGIFGAVNQDGRVNSAS EEECCCEEEEECCHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCHH AAARRGEVLHIFATGLGAASPAVEDGAAAPSQPLANGIVMPNVFLGGRQLAPLFNGLAPG HHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCEECCCEEECCCCHHHHHHHHCCC LAGVWQIDVLIPADASTGPEIPLVVEHGTTSNTVTIAVVPAAQ CCCEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA