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The map label for this gene is 116626063

Identifier: 116626063

GI number: 116626063

Start: 8826931

End: 8827494

Strand: Direct

Name: 116626063

Synonym: Acid_7021

Alternate gene names: NA

Gene position: 8826931-8827494 (Clockwise)

Preceding gene: 116626061

Following gene: 116626064

Centisome position: 88.57

GC content: 62.59

Gene sequence:

>564_bases
ATGCAAGCGGCCCCAGGTGAAATTGCGGAATTGATGGACCGGCTCCGTTCGGGGAGCAAGGAAGCGGCTGGACAGCTGGT
GTCACTGTTCTACCCGGAGCTGCGCCGCCTGGCCCGTTCCCACATGCGCCGCGAAGCGCCCGGCCACAGCTGGCAGCCAA
CCGTGCTGGTCAATCAGCTTTACCTGGAGTTGATCAAGATCAAGGCGCTCAAGAAGGACGGTGGCGGCGACGCCTACGAC
GACCGCCAGGCGTTCTTCGGGCTGGCCGCGCATTTGATGCGCCGCCTGTTGATCCACCATTCCCGCCCCCTCGCTCAGCG
CATGGAGATGACCGAACTGGGGGATGAGGTGCTCTTCGAAGGCTCCGACACGGATGAACTGGCAATCGTGGAGGATCTGT
TGGGAGGTCTTGACGAAGTCGATCCCCAATTTCGCACGGTGGCCGAACTGAAGGTCTTCGAAGGCCTCTCGATGGAAGAG
ATCGCCGCGCAATTGGACATCCCGCTTCGAACGGCCTACCGGCGCTGGACGTTCGCGCGCACCTGGCTCGCCAGGCACCT
GTAA

Upstream 100 bases:

>100_bases
GTGCCCATAAGCGACGCGGGCGCAAGGTCGTCTCATTTTCTTCTCAGCTTCGTATTATAACGGACGCTTGCCGCGAGATA
ATTGAAAAGGATCAGGCAAC

Downstream 100 bases:

>100_bases
TCTCGCCCCGTAAATCCGCGACGAAAAAAATATTCGCAGGCGTGGCAAAAAGAACGGCCTGCTCTCCCTTTCCCTCACGA
GGGGCCTTTTGACGAAGCCG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: Sigma Factor ECF-Like Family Protein; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma Factor; Extracytoplasmic Sigma Factor ECF; RNA Polymerase ECF-Subfamily Sigma Factor; ECF Sigma Factor Family Protein; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma-E Factor; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MQAAPGEIAELMDRLRSGSKEAAGQLVSLFYPELRRLARSHMRREAPGHSWQPTVLVNQLYLELIKIKALKKDGGGDAYD
DRQAFFGLAAHLMRRLLIHHSRPLAQRMEMTELGDEVLFEGSDTDELAIVEDLLGGLDEVDPQFRTVAELKVFEGLSMEE
IAAQLDIPLRTAYRRWTFARTWLARHL

Sequences:

>Translated_187_residues
MQAAPGEIAELMDRLRSGSKEAAGQLVSLFYPELRRLARSHMRREAPGHSWQPTVLVNQLYLELIKIKALKKDGGGDAYD
DRQAFFGLAAHLMRRLLIHHSRPLAQRMEMTELGDEVLFEGSDTDELAIVEDLLGGLDEVDPQFRTVAELKVFEGLSMEE
IAAQLDIPLRTAYRRWTFARTWLARHL
>Mature_187_residues
MQAAPGEIAELMDRLRSGSKEAAGQLVSLFYPELRRLARSHMRREAPGHSWQPTVLVNQLYLELIKIKALKKDGGGDAYD
DRQAFFGLAAHLMRRLLIHHSRPLAQRMEMTELGDEVLFEGSDTDELAIVEDLLGGLDEVDPQFRTVAELKVFEGLSMEE
IAAQLDIPLRTAYRRWTFARTWLARHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21298; Mature: 21298

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAAPGEIAELMDRLRSGSKEAAGQLVSLFYPELRRLARSHMRREAPGHSWQPTVLVNQL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
YLELIKIKALKKDGGGDAYDDRQAFFGLAAHLMRRLLIHHSRPLAQRMEMTELGDEVLFE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEC
GSDTDELAIVEDLLGGLDEVDPQFRTVAELKVFEGLSMEEIAAQLDIPLRTAYRRWTFAR
CCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHH
TWLARHL
HHHHHCC
>Mature Secondary Structure
MQAAPGEIAELMDRLRSGSKEAAGQLVSLFYPELRRLARSHMRREAPGHSWQPTVLVNQL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
YLELIKIKALKKDGGGDAYDDRQAFFGLAAHLMRRLLIHHSRPLAQRMEMTELGDEVLFE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEC
GSDTDELAIVEDLLGGLDEVDPQFRTVAELKVFEGLSMEEIAAQLDIPLRTAYRRWTFAR
CCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHH
TWLARHL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA