| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626018
Identifier: 116626018
GI number: 116626018
Start: 8764162
End: 8766054
Strand: Reverse
Name: 116626018
Synonym: Acid_6976
Alternate gene names: NA
Gene position: 8766054-8764162 (Counterclockwise)
Preceding gene: 116626020
Following gene: 116626013
Centisome position: 87.96
GC content: 65.56
Gene sequence:
>1893_bases ATGCTGCTCCGAACCTTGACCGGAAGCCTGATCTTCGGTGTGCTCTCGCACGCGGCGTTACTGCGTATTGAAATCAAGGA GCGCAGCGACGTTCCCAACTCGGCGTACGAGCAGATTGTGGGGCGCGCGTACTTCTCGGTGGACCCCGGCCTGCGCGCGA ACGCGGGCATCGTCGATCTGGACAAGGCGGCGCGCAACGGCGCGGGACAAGTGGAATTTTCGAGCGACCTTTATCTGCTG CGGCCGAAATCGCCGGCGGCCGGCAACGGTACGGTGTTGTTCGAAGTTTCGAATCGCGGCGGGAAGAGCGCGCTCGGCAT GTTTAACCGCGGCGACCAGTTTCTCTTCGATCGCGGCTTCACCGTGGCGTGGATCGGCTGGCAGTTCGATGTGCCGGAGC GGCCGGAGTTGCTGCGGCTGTATGCGCCGATCGCGAAGGGCGTGACCGGGATCGTGCGCTCGGAGATCGTGGTGGACCGG CGGGAGATGACGCATTCGGTGGCGGACCGCAATCACCGGCCGTACCCCGTCCTGCGGCCCGACGATCCGGCGCTTGCGCT GACGGTTCGCGACCGCGTGGAGGGTCCGCGCACGACGGTGCCGCGCGGCGACTGGCATATCGAAGACGGGACGACGGTCG CCTTGAAGGGCGGCTTTCAGCCGGGGCGGCTCTACGAACTGGTGTACACGGCACAGGATCCGCCGGTGGCGGGCCTCGGG ATGGCGGCGATCCGGGACTTCATTTCCTACATGAAATACGGCGGCGCGGAGGGAGCGCCGGTGAAGCGCGCGATCGGGTA CGGAGTGTCGCAGAGCGGGCGCTTTTTGCGCGCGTATTTATATGACGGTTTCAACCAGGACGAGAAGGATCGGAAGGTCT TCGATGGCGTGATGGCGCACGTGGCAGGGGCCGGTCGCGGGAGCTTCAACGTGCGCTTCGCGCAGCCCTCGCGCGATGGG CATCCGTTCCTGAACACGTTGTATCCCACCGATCTGTTCCCGTTTACGGACCTGGAAGAGATCGACCCGGCGACAGGGGC GAAGGGCGGCCTGCTCGTCCATGCCGGCAAGCCCGAGACCTGGCCCAAGATCTTCTACACCAACTCGTCCTACGAATATT ACGGACGCGATGCGGCGCTGATCCACAGTTCGCCGGATGGGAAGAAGGATGCGCCGCTGGCAGCGAATACGCGAGTGTAT TTTTTCAATGGCGGGCAGCACGGGCCGGCGGCGTTCCCGCCTCCGCACAACGGTACGCAGAACAGCTCCAATCCCAACCC GTACACGTGGAGCCTGCGCGCCATGCTGGCGGAGATGAATGCCTGGATCACGGACGGGACGGCGCCGCCGGCATCGGTCT ATCCGAAAGTGTCGGCCGACCAGGCGGTGGCGCCTGGGGCTGTGCAATTTCCGAAGATCCCTGGCGTGACTTTTCCCGCG CGTACCCAGCGGGCGTGGCGGGCCGACTATGGTCCGCAGTTCGCGGCGGGAATCGTTACGGTGGAACCGCCGAAGCTGGG CGCGCCGTTCGCCACGCTGGTGCCGCAGGTCGATCGGGACGGCAACGAGATCGGCGGCATTCGCATGCCGGAGATCCAGG CGCCGCTCGGAACCTACACGGGCTGGAACCTGCGCGCGCAGGCAATCGGCGCGCCGGACGAGATGTACAGCATGCAGGGA TCGTGGATTCCGTTCGCGTTGACACGTAAGGATCGCGAGCGCTCGGGCGATTCGCGCCTGTCGATCGAGGAGCGGTACAC GAGCCGCGAGGATTACCTGGAGAAGTTCGCGGCGGCCGGCAAATCGCTAGTCGCGGCGGGGTTCCTGCTTGAGGGCGACC TGCCCCAGTTGCTCCGTCGCGGGGCCGCCGAGTGGGACTACCTGCATCGATGA
Upstream 100 bases:
>100_bases CAGCGCGAGAGAGAACAGGAACGCGATTATGGGGAGATGTCTCATCATGTACTAACGCGCATTCTAGCGCTGCAAAGGCT CAAGGCGGTAGCATATTCCC
Downstream 100 bases:
>100_bases AGTGATCAGGCGGCGGGCGCGCTCGAAATCCTCTTTGAGCTTGGCGGTAATCTTGTCGGCCACGTCGGTACTGGCGCCGC GGAATTTGGCGCCGAGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MLLRTLTGSLIFGVLSHAALLRIEIKERSDVPNSAYEQIVGRAYFSVDPGLRANAGIVDLDKAARNGAGQVEFSSDLYLL RPKSPAAGNGTVLFEVSNRGGKSALGMFNRGDQFLFDRGFTVAWIGWQFDVPERPELLRLYAPIAKGVTGIVRSEIVVDR REMTHSVADRNHRPYPVLRPDDPALALTVRDRVEGPRTTVPRGDWHIEDGTTVALKGGFQPGRLYELVYTAQDPPVAGLG MAAIRDFISYMKYGGAEGAPVKRAIGYGVSQSGRFLRAYLYDGFNQDEKDRKVFDGVMAHVAGAGRGSFNVRFAQPSRDG HPFLNTLYPTDLFPFTDLEEIDPATGAKGGLLVHAGKPETWPKIFYTNSSYEYYGRDAALIHSSPDGKKDAPLAANTRVY FFNGGQHGPAAFPPPHNGTQNSSNPNPYTWSLRAMLAEMNAWITDGTAPPASVYPKVSADQAVAPGAVQFPKIPGVTFPA RTQRAWRADYGPQFAAGIVTVEPPKLGAPFATLVPQVDRDGNEIGGIRMPEIQAPLGTYTGWNLRAQAIGAPDEMYSMQG SWIPFALTRKDRERSGDSRLSIEERYTSREDYLEKFAAAGKSLVAAGFLLEGDLPQLLRRGAAEWDYLHR
Sequences:
>Translated_630_residues MLLRTLTGSLIFGVLSHAALLRIEIKERSDVPNSAYEQIVGRAYFSVDPGLRANAGIVDLDKAARNGAGQVEFSSDLYLL RPKSPAAGNGTVLFEVSNRGGKSALGMFNRGDQFLFDRGFTVAWIGWQFDVPERPELLRLYAPIAKGVTGIVRSEIVVDR REMTHSVADRNHRPYPVLRPDDPALALTVRDRVEGPRTTVPRGDWHIEDGTTVALKGGFQPGRLYELVYTAQDPPVAGLG MAAIRDFISYMKYGGAEGAPVKRAIGYGVSQSGRFLRAYLYDGFNQDEKDRKVFDGVMAHVAGAGRGSFNVRFAQPSRDG HPFLNTLYPTDLFPFTDLEEIDPATGAKGGLLVHAGKPETWPKIFYTNSSYEYYGRDAALIHSSPDGKKDAPLAANTRVY FFNGGQHGPAAFPPPHNGTQNSSNPNPYTWSLRAMLAEMNAWITDGTAPPASVYPKVSADQAVAPGAVQFPKIPGVTFPA RTQRAWRADYGPQFAAGIVTVEPPKLGAPFATLVPQVDRDGNEIGGIRMPEIQAPLGTYTGWNLRAQAIGAPDEMYSMQG SWIPFALTRKDRERSGDSRLSIEERYTSREDYLEKFAAAGKSLVAAGFLLEGDLPQLLRRGAAEWDYLHR >Mature_630_residues MLLRTLTGSLIFGVLSHAALLRIEIKERSDVPNSAYEQIVGRAYFSVDPGLRANAGIVDLDKAARNGAGQVEFSSDLYLL RPKSPAAGNGTVLFEVSNRGGKSALGMFNRGDQFLFDRGFTVAWIGWQFDVPERPELLRLYAPIAKGVTGIVRSEIVVDR REMTHSVADRNHRPYPVLRPDDPALALTVRDRVEGPRTTVPRGDWHIEDGTTVALKGGFQPGRLYELVYTAQDPPVAGLG MAAIRDFISYMKYGGAEGAPVKRAIGYGVSQSGRFLRAYLYDGFNQDEKDRKVFDGVMAHVAGAGRGSFNVRFAQPSRDG HPFLNTLYPTDLFPFTDLEEIDPATGAKGGLLVHAGKPETWPKIFYTNSSYEYYGRDAALIHSSPDGKKDAPLAANTRVY FFNGGQHGPAAFPPPHNGTQNSSNPNPYTWSLRAMLAEMNAWITDGTAPPASVYPKVSADQAVAPGAVQFPKIPGVTFPA RTQRAWRADYGPQFAAGIVTVEPPKLGAPFATLVPQVDRDGNEIGGIRMPEIQAPLGTYTGWNLRAQAIGAPDEMYSMQG SWIPFALTRKDRERSGDSRLSIEERYTSREDYLEKFAAAGKSLVAAGFLLEGDLPQLLRRGAAEWDYLHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68987; Mature: 68987
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRTLTGSLIFGVLSHAALLRIEIKERSDVPNSAYEQIVGRAYFSVDPGLRANAGIVDL CCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHEEEEECCCCCCCCCEEEC DKAARNGAGQVEFSSDLYLLRPKSPAAGNGTVLFEVSNRGGKSALGMFNRGDQFLFDRGF HHHHCCCCCEEEECCCEEEECCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEECCC TVAWIGWQFDVPERPELLRLYAPIAKGVTGIVRSEIVVDRREMTHSVADRNHRPYPVLRP EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DDPALALTVRDRVEGPRTTVPRGDWHIEDGTTVALKGGFQPGRLYELVYTAQDPPVAGLG CCCEEEEEEHHHCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCCCC MAAIRDFISYMKYGGAEGAPVKRAIGYGVSQSGRFLRAYLYDGFNQDEKDRKVFDGVMAH HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH VAGAGRGSFNVRFAQPSRDGHPFLNTLYPTDLFPFTDLEEIDPATGAKGGLLVHAGKPET HHCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCC WPKIFYTNSSYEYYGRDAALIHSSPDGKKDAPLAANTRVYFFNGGQHGPAAFPPPHNGTQ CCEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC NSSNPNPYTWSLRAMLAEMNAWITDGTAPPASVYPKVSADQAVAPGAVQFPKIPGVTFPA CCCCCCCEEEHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH RTQRAWRADYGPQFAAGIVTVEPPKLGAPFATLVPQVDRDGNEIGGIRMPEIQAPLGTYT HCCHHHHCCCCCCHHEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCCCC GWNLRAQAIGAPDEMYSMQGSWIPFALTRKDRERSGDSRLSIEERYTSREDYLEKFAAAG CCCEEEEECCCCHHHHHCCCCEEEEEECCCHHHCCCCCCEEHHHHHCCHHHHHHHHHHCC KSLVAAGFLLEGDLPQLLRRGAAEWDYLHR CHHHHEEEEECCCHHHHHHCCCCCHHHHCC >Mature Secondary Structure MLLRTLTGSLIFGVLSHAALLRIEIKERSDVPNSAYEQIVGRAYFSVDPGLRANAGIVDL CCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHEEEEECCCCCCCCCEEEC DKAARNGAGQVEFSSDLYLLRPKSPAAGNGTVLFEVSNRGGKSALGMFNRGDQFLFDRGF HHHHCCCCCEEEECCCEEEECCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEECCC TVAWIGWQFDVPERPELLRLYAPIAKGVTGIVRSEIVVDRREMTHSVADRNHRPYPVLRP EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DDPALALTVRDRVEGPRTTVPRGDWHIEDGTTVALKGGFQPGRLYELVYTAQDPPVAGLG CCCEEEEEEHHHCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCCCC MAAIRDFISYMKYGGAEGAPVKRAIGYGVSQSGRFLRAYLYDGFNQDEKDRKVFDGVMAH HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH VAGAGRGSFNVRFAQPSRDGHPFLNTLYPTDLFPFTDLEEIDPATGAKGGLLVHAGKPET HHCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCC WPKIFYTNSSYEYYGRDAALIHSSPDGKKDAPLAANTRVYFFNGGQHGPAAFPPPHNGTQ CCEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC NSSNPNPYTWSLRAMLAEMNAWITDGTAPPASVYPKVSADQAVAPGAVQFPKIPGVTFPA CCCCCCCEEEHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH RTQRAWRADYGPQFAAGIVTVEPPKLGAPFATLVPQVDRDGNEIGGIRMPEIQAPLGTYT HCCHHHHCCCCCCHHEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCCCC GWNLRAQAIGAPDEMYSMQGSWIPFALTRKDRERSGDSRLSIEERYTSREDYLEKFAAAG CCCEEEEECCCCHHHHHCCCCEEEEEECCCHHHCCCCCCEEHHHHHCCHHHHHHHHHHCC KSLVAAGFLLEGDLPQLLRRGAAEWDYLHR CHHHHEEEEECCCHHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA