| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626013
Identifier: 116626013
GI number: 116626013
Start: 8759500
End: 8760201
Strand: Reverse
Name: 116626013
Synonym: Acid_6971
Alternate gene names: NA
Gene position: 8760201-8759500 (Counterclockwise)
Preceding gene: 116626018
Following gene: 116626012
Centisome position: 87.9
GC content: 61.11
Gene sequence:
>702_bases ATGATCAAACGGTGGACACCAATAGCCCTACTTCTCGCGTTTAGCCTGATGCCCGTTTACGGCCAGAAAAAGGAGAACGA GAGAGTAGCCAGCGCGGGCCGGGTGATGAGCGAGATTCTACGGATCCCGGACAACATCCCCTCGGACCTGCTGCAGAAGG CAGAGTGCGTGATCGTTCTGCCTTCGGTCCTAAAGTTCGCGCTCGGGATCGGCGGCAGCTATGGCCGTGGACTGATGGTC TGCCGGGGCGGAGACAATTTCAGCGGTTCCTGGGGAGCCCCTTCCATGATTGCGCTCGAAGGGGGAAGTTTCGGGCTGCA ACTGGGAGGGCAGGCGACGGATTTCGTTCTACTGGTGATGAACAATCGAGGTGCGAAGGGCATTCTCAGCAGCAAGGTCA AACTCGGCGCGGATGCGTCCGCGGCCGCCGGGCCAAAAGGCCGGGATGCCGGCGCCGCAACCGACGTGACGATGCGGGCG GAGATCTTGACGTATTCCCGTTCGCGCGGGCTCTTTGCCGGCGTCTCGCTCGAAGGCTCGACCCTGCGGCCGGATAACGA GGCCAATAGGAAGCTGTACAAGAAGGAACTGCCCGCCCGCGACATCGTGTTGCATCAAGCCGTTCGCGCACCGGCTTCCG CCAAGCAGTTGTTATCCGTTCTCAACGCCAAATCCCCGCGAAACAGATCGCAGCGAGGCTGA
Upstream 100 bases:
>100_bases GATACCAACCAAAGTGATCAGTGAAGCGATCAGTAAAGCGATCAAGCGGCTCGGGCTTACTCGCAATGGTTCCGGGGTAT GCTCGAATTCTGGAGACATA
Downstream 100 bases:
>100_bases CGCCGGCGGCACGGGATATACTGGCCGCGATGCCCAACCACCCACTGTCCCGATCGGTCGCGAAGGATCCCGTCACCTGG CTGTACCCTGCGATCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIKRWTPIALLLAFSLMPVYGQKKENERVASAGRVMSEILRIPDNIPSDLLQKAECVIVLPSVLKFALGIGGSYGRGLMV CRGGDNFSGSWGAPSMIALEGGSFGLQLGGQATDFVLLVMNNRGAKGILSSKVKLGADASAAAGPKGRDAGAATDVTMRA EILTYSRSRGLFAGVSLEGSTLRPDNEANRKLYKKELPARDIVLHQAVRAPASAKQLLSVLNAKSPRNRSQRG
Sequences:
>Translated_233_residues MIKRWTPIALLLAFSLMPVYGQKKENERVASAGRVMSEILRIPDNIPSDLLQKAECVIVLPSVLKFALGIGGSYGRGLMV CRGGDNFSGSWGAPSMIALEGGSFGLQLGGQATDFVLLVMNNRGAKGILSSKVKLGADASAAAGPKGRDAGAATDVTMRA EILTYSRSRGLFAGVSLEGSTLRPDNEANRKLYKKELPARDIVLHQAVRAPASAKQLLSVLNAKSPRNRSQRG >Mature_233_residues MIKRWTPIALLLAFSLMPVYGQKKENERVASAGRVMSEILRIPDNIPSDLLQKAECVIVLPSVLKFALGIGGSYGRGLMV CRGGDNFSGSWGAPSMIALEGGSFGLQLGGQATDFVLLVMNNRGAKGILSSKVKLGADASAAAGPKGRDAGAATDVTMRA EILTYSRSRGLFAGVSLEGSTLRPDNEANRKLYKKELPARDIVLHQAVRAPASAKQLLSVLNAKSPRNRSQRG
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227430338, Length=216, Percent_Identity=34.2592592592593, Blast_Score=97, Evalue=9e-21, Organism=Homo sapiens, GI227430336, Length=216, Percent_Identity=34.2592592592593, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6321137, Length=191, Percent_Identity=35.0785340314136, Blast_Score=82, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6321804, Length=183, Percent_Identity=34.9726775956284, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24722; Mature: 24722
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRWTPIALLLAFSLMPVYGQKKENERVASAGRVMSEILRIPDNIPSDLLQKAECVIVL CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEH PSVLKFALGIGGSYGRGLMVCRGGDNFSGSWGAPSMIALEGGSFGLQLGGQATDFVLLVM HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEE NNRGAKGILSSKVKLGADASAAAGPKGRDAGAATDVTMRAEILTYSRSRGLFAGVSLEGS CCCCCCCHHHCCEECCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEEEECCCC TLRPDNEANRKLYKKELPARDIVLHQAVRAPASAKQLLSVLNAKSPRNRSQRG CCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIKRWTPIALLLAFSLMPVYGQKKENERVASAGRVMSEILRIPDNIPSDLLQKAECVIVL CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEH PSVLKFALGIGGSYGRGLMVCRGGDNFSGSWGAPSMIALEGGSFGLQLGGQATDFVLLVM HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEE NNRGAKGILSSKVKLGADASAAAGPKGRDAGAATDVTMRAEILTYSRSRGLFAGVSLEGS CCCCCCCHHHCCEECCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEEEECCCC TLRPDNEANRKLYKKELPARDIVLHQAVRAPASAKQLLSVLNAKSPRNRSQRG CCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA