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The map label for this gene is yfbE [C]

Identifier: 116625988

GI number: 116625988

Start: 8727450

End: 8728577

Strand: Reverse

Name: yfbE [C]

Synonym: Acid_6946

Alternate gene names: 116625988

Gene position: 8728577-8727450 (Counterclockwise)

Preceding gene: 116625989

Following gene: 116625987

Centisome position: 87.59

GC content: 56.56

Gene sequence:

>1128_bases
GTGTCGATTCAATTGTTCGTGCCCAGTTTTCGAATCGATGAGTGCATCAAGGGTATTCGGGAGTGCCTCGAAAAGGGTTG
GACCGGAGCGGGATTTAAGACCGTCGAGTTCGAAGATGCTTGGAAGCAATACACCGGATTAAGTCACGCGCATTTCCTCA
GCTCGAATACGGTTGGCCTGCACCTGGCACTGCACATCATCAAGAGCAAATTTGGTTGGGACGATGACGATGAGGTAATC
ACAACCCCATTGACCTTTGTCTCTACCAACCATGCCATCCTGCATTCGCGGCTGCGGCCGGTCTTCGCCGATATCGACGA
CTATCTCTGTTTGGACCCTTCCAGCGTTGCAGCCAGGATAACGCCCAAGACCCGCGCTGTCATGTTCGTCGGCTTGGGCG
GCAATACCGGCCAATATGACAGGATTGTGGATCTATGCCGGCAGCGGGGGCTGAAACTGATCCTGGATGCCGCGCATATG
GCAGGGACACGGGTGGGCGGACGCCAGGTCGGCCTGGAACCGGACGCGGTGATATTCAGCTTCCAAGCCGTCAAGAACCT
TCCTACCGCGGACTCAGGAATGATCTGCTTCAAGGATCAGGACGACGATGCGCGCGCGCGGAAGCTGACCTGGTTGGGAA
TCGACAAAGATACGTATACCAGAACCGCATCGCAGGGCGCGTATAAGTGGATGTATGAAGTCGAAGAAGTAGGGTTCAAG
TATCACGGGAATTCAATCATGGCGAGCATGGGGCTGGCCCAGCTGAAGTGGCTCGATCCGGACAACTCGTATCGCCGCCA
GCTCGCAGCGTGGTATCACGCCAGGTTAGCCGGGCACGGTGCTGTTCGCATCGTCGAGGTTGTTCCCGGCTGCGAGTCCG
CCACTCATCTCTTTCAAGTCCGCGTGAATCACCGGGACGCCGTGATGCTGGCGCTGAACGGGCACCAGGTCTATCCGGGC
GTACACTACCGCGACAATACCGAATACGCCATGTACTCCTACGCCGCCGGCTCCTGTCCGAATGCGGCGCGCGCAAGCCG
GGAAGTGATCTCTCTCCCTCTCCACATGAATTTGTCGCGCAATGACGTTAACATGGTGTCTGATCTCCTTCTTCATTACG
CAAAATGA

Upstream 100 bases:

>100_bases
ATTTCTACAGCCCAAATCTGTCGCGACGCCTCGAAACTATTGATCTGTCGGCACTGTCCCTGCAATGAGTTCGGATGGAT
AGGGAGGAACTAACAAGATA

Downstream 100 bases:

>100_bases
AGCGGTCAATCCAGCCATTTGGAAACGCCGATGTCCGGTTGAGGCTGATCACGGAAGCCGACCTGGATATGACCCTGGGT
TGGCGGAATCGCGATGATGT

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSIQLFVPSFRIDECIKGIRECLEKGWTGAGFKTVEFEDAWKQYTGLSHAHFLSSNTVGLHLALHIIKSKFGWDDDDEVI
TTPLTFVSTNHAILHSRLRPVFADIDDYLCLDPSSVAARITPKTRAVMFVGLGGNTGQYDRIVDLCRQRGLKLILDAAHM
AGTRVGGRQVGLEPDAVIFSFQAVKNLPTADSGMICFKDQDDDARARKLTWLGIDKDTYTRTASQGAYKWMYEVEEVGFK
YHGNSIMASMGLAQLKWLDPDNSYRRQLAAWYHARLAGHGAVRIVEVVPGCESATHLFQVRVNHRDAVMLALNGHQVYPG
VHYRDNTEYAMYSYAAGSCPNAARASREVISLPLHMNLSRNDVNMVSDLLLHYAK

Sequences:

>Translated_375_residues
MSIQLFVPSFRIDECIKGIRECLEKGWTGAGFKTVEFEDAWKQYTGLSHAHFLSSNTVGLHLALHIIKSKFGWDDDDEVI
TTPLTFVSTNHAILHSRLRPVFADIDDYLCLDPSSVAARITPKTRAVMFVGLGGNTGQYDRIVDLCRQRGLKLILDAAHM
AGTRVGGRQVGLEPDAVIFSFQAVKNLPTADSGMICFKDQDDDARARKLTWLGIDKDTYTRTASQGAYKWMYEVEEVGFK
YHGNSIMASMGLAQLKWLDPDNSYRRQLAAWYHARLAGHGAVRIVEVVPGCESATHLFQVRVNHRDAVMLALNGHQVYPG
VHYRDNTEYAMYSYAAGSCPNAARASREVISLPLHMNLSRNDVNMVSDLLLHYAK
>Mature_374_residues
SIQLFVPSFRIDECIKGIRECLEKGWTGAGFKTVEFEDAWKQYTGLSHAHFLSSNTVGLHLALHIIKSKFGWDDDDEVIT
TPLTFVSTNHAILHSRLRPVFADIDDYLCLDPSSVAARITPKTRAVMFVGLGGNTGQYDRIVDLCRQRGLKLILDAAHMA
GTRVGGRQVGLEPDAVIFSFQAVKNLPTADSGMICFKDQDDDARARKLTWLGIDKDTYTRTASQGAYKWMYEVEEVGFKY
HGNSIMASMGLAQLKWLDPDNSYRRQLAAWYHARLAGHGAVRIVEVVPGCESATHLFQVRVNHRDAVMLALNGHQVYPGV
HYRDNTEYAMYSYAAGSCPNAARASREVISLPLHMNLSRNDVNMVSDLLLHYAK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=394, Percent_Identity=31.9796954314721, Blast_Score=161, Evalue=6e-41,
Organism=Escherichia coli, GI2367285, Length=343, Percent_Identity=25.9475218658892, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41943; Mature: 41812

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQLFVPSFRIDECIKGIRECLEKGWTGAGFKTVEFEDAWKQYTGLSHAHFLSSNTVGL
CEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCHHHEECCCCCHH
HLALHIIKSKFGWDDDDEVITTPLTFVSTNHAILHSRLRPVFADIDDYLCLDPSSVAARI
HHHHHHHHHHCCCCCCCCEEECCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCEEEE
TPKTRAVMFVGLGGNTGQYDRIVDLCRQRGLKLILDAAHMAGTRVGGRQVGLEPDAVIFS
CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEHHHHHCCCCCCEEECCCCCCEEEE
FQAVKNLPTADSGMICFKDQDDDARARKLTWLGIDKDTYTRTASQGAYKWMYEVEEVGFK
EHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHCCCCCHHHHHHHHHHCCEE
YHGNSIMASMGLAQLKWLDPDNSYRRQLAAWYHARLAGHGAVRIVEVVPGCESATHLFQV
ECCCCCEECCCHHEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEE
RVNHRDAVMLALNGHQVYPGVHYRDNTEYAMYSYAAGSCPNAARASREVISLPLHMNLSR
EECCCCEEEEEECCCEECCCCEECCCCCEEEEEECCCCCCCHHHCCCEEEEEEEEECCCC
NDVNMVSDLLLHYAK
CHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIQLFVPSFRIDECIKGIRECLEKGWTGAGFKTVEFEDAWKQYTGLSHAHFLSSNTVGL
EEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCHHHEECCCCCHH
HLALHIIKSKFGWDDDDEVITTPLTFVSTNHAILHSRLRPVFADIDDYLCLDPSSVAARI
HHHHHHHHHHCCCCCCCCEEECCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCEEEE
TPKTRAVMFVGLGGNTGQYDRIVDLCRQRGLKLILDAAHMAGTRVGGRQVGLEPDAVIFS
CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEHHHHHCCCCCCEEECCCCCCEEEE
FQAVKNLPTADSGMICFKDQDDDARARKLTWLGIDKDTYTRTASQGAYKWMYEVEEVGFK
EHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHCCCCCHHHHHHHHHHCCEE
YHGNSIMASMGLAQLKWLDPDNSYRRQLAAWYHARLAGHGAVRIVEVVPGCESATHLFQV
ECCCCCEECCCHHEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEE
RVNHRDAVMLALNGHQVYPGVHYRDNTEYAMYSYAAGSCPNAARASREVISLPLHMNLSR
EECCCCEEEEEECCCEECCCCEECCCCCEEEEEECCCCCCCHHHCCCEEEEEEEEECCCC
NDVNMVSDLLLHYAK
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]