| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625928
Identifier: 116625928
GI number: 116625928
Start: 8658346
End: 8658780
Strand: Direct
Name: 116625928
Synonym: Acid_6885
Alternate gene names: NA
Gene position: 8658346-8658780 (Clockwise)
Preceding gene: 116625927
Following gene: 116625929
Centisome position: 86.88
GC content: 57.24
Gene sequence:
>435_bases ATGAAAAAGACACTCAAAATGGTTTGCGTACTGTCCATGGCCGCGTTACTGATGGGGGAGGTGGTTCCGATGCGCGCCGA AGATGGACAAAAGAATGGGCAGGCCGCACAGATCCGGCTGAGGACTACGCTAGCCGGCGCGGCAATCCAAGGCAAAAAGC CGGGAGGGAATGCCGACTTTAGAAATGATTCAAGCAGCCGCATGCGGCTGAATGTGGAAGTGGAGAATGTAAATCTTCCC GCCGGCACGATTCTGACCGTGGCCGTGGTCCACGCCGGGGTTTCGATGACGGTGGGTACCATCAAGCTAGGCAGCACGGG CGAGAGTGAGCTGGAACTTAATTTTCAAAACGGTGCGGTTGTTCCCGCGATCGCCAGCGGCGACATGGTGACCGTCTCGA ACGGTATGGCCGTGATTCTCGCGGGAGCGTTCTAG
Upstream 100 bases:
>100_bases CCACCCGCTGGCCAGAATCAGATTGCTGTTCTGCGTGCGCGGCCGGAATGTCTTAGTTTCTGACGCCATTCATGGCGAAT TCAGTAAGAGGATCAGCAAA
Downstream 100 bases:
>100_bases ATTGTAGAAGAAACGAGGGGACAGTCGGGAAGACTGTCCCGCATTTGGAGCCCAGAGAAGGGCGGTGACGCAATGCGGAA CGCTGCCACAATTCGCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKKTLKMVCVLSMAALLMGEVVPMRAEDGQKNGQAAQIRLRTTLAGAAIQGKKPGGNADFRNDSSSRMRLNVEVENVNLP AGTILTVAVVHAGVSMTVGTIKLGSTGESELELNFQNGAVVPAIASGDMVTVSNGMAVILAGAF
Sequences:
>Translated_144_residues MKKTLKMVCVLSMAALLMGEVVPMRAEDGQKNGQAAQIRLRTTLAGAAIQGKKPGGNADFRNDSSSRMRLNVEVENVNLP AGTILTVAVVHAGVSMTVGTIKLGSTGESELELNFQNGAVVPAIASGDMVTVSNGMAVILAGAF >Mature_144_residues MKKTLKMVCVLSMAALLMGEVVPMRAEDGQKNGQAAQIRLRTTLAGAAIQGKKPGGNADFRNDSSSRMRLNVEVENVNLP AGTILTVAVVHAGVSMTVGTIKLGSTGESELELNFQNGAVVPAIASGDMVTVSNGMAVILAGAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14857; Mature: 14857
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLKMVCVLSMAALLMGEVVPMRAEDGQKNGQAAQIRLRTTLAGAAIQGKKPGGNADF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCCCCCC RNDSSSRMRLNVEVENVNLPAGTILTVAVVHAGVSMTVGTIKLGSTGESELELNFQNGAV CCCCCCEEEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEECCCEE VPAIASGDMVTVSNGMAVILAGAF EEEECCCCEEEECCCEEEEEEECC >Mature Secondary Structure MKKTLKMVCVLSMAALLMGEVVPMRAEDGQKNGQAAQIRLRTTLAGAAIQGKKPGGNADF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCCCCCC RNDSSSRMRLNVEVENVNLPAGTILTVAVVHAGVSMTVGTIKLGSTGESELELNFQNGAV CCCCCCEEEEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEECCCEE VPAIASGDMVTVSNGMAVILAGAF EEEECCCCEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA