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The map label for this gene is 116625885

Identifier: 116625885

GI number: 116625885

Start: 8569377

End: 8569919

Strand: Reverse

Name: 116625885

Synonym: Acid_6839

Alternate gene names: NA

Gene position: 8569919-8569377 (Counterclockwise)

Preceding gene: 116625886

Following gene: 116625884

Centisome position: 85.99

GC content: 55.99

Gene sequence:

>543_bases
ATGGACGATTGGTCCCCCGATCAACGATTCCTCATTTACGAGGTCGAGTCACCGGAAACGCAGAGTGACCTATTCTATCG
GGAACGCGGCAAGGATGGAAAACTGGGCGAGCCGGTGGTTTACCTCAAAACTCCTTTCCGCGAAAGGCAGCCGCGATTCT
CGCCGGACGGCAGATTCGTAGCATACATCTCCAACGAATCGGGTGGGCCGGAAATCTACGTTCGGCAGTTCCCCAACGGC
GCAAACAAAGTGCGGATCTCAACTCACAGGGGAGTTGCGCCACGCTGGCGCCAGGATGGCAAGGAGATCTTCTATGCGGA
GCAAAATAACTTAATGGCGGTGACAGTCACCACGCAACCGGTTTTTTCGTCCGCCAATCCGGTCCGGTCGTTTCAGAACG
CATCGCTGCCGAATTATGATGCCTCGGCCGACGGCAAACGGTTCATCGTTATGGAAAAGCCACCCGCCGGTTCGCCGCTC
GCCATCCATGTCGCCCAAAACTGGTTCGAAGAATTCCGCCCTCAGCAGAAAATGACACGCTGA

Upstream 100 bases:

>100_bases
CGTATTCTTCCGATCGCCGCGGCAATCGGGATATTTTCTCCAAGGCAGCCGACGGCAGCGGCGAGGTCAACCCGCTGGTC
AGCACACCCGCGGATGAGAT

Downstream 100 bases:

>100_bases
ATCCGCGCAATCAGTCCTGGGACGGTGCCTCGTCGGGTGCGCATACGAAGTGCTCCCCGTCGCGACAGCGTTTGTGGCTC
GCAGACACCGGTGCCTTCGC

Product: WD40 domain-containing protein

Products: NA

Alternate protein names: WD40 Domain-Containing Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDDWSPDQRFLIYEVESPETQSDLFYRERGKDGKLGEPVVYLKTPFRERQPRFSPDGRFVAYISNESGGPEIYVRQFPNG
ANKVRISTHRGVAPRWRQDGKEIFYAEQNNLMAVTVTTQPVFSSANPVRSFQNASLPNYDASADGKRFIVMEKPPAGSPL
AIHVAQNWFEEFRPQQKMTR

Sequences:

>Translated_180_residues
MDDWSPDQRFLIYEVESPETQSDLFYRERGKDGKLGEPVVYLKTPFRERQPRFSPDGRFVAYISNESGGPEIYVRQFPNG
ANKVRISTHRGVAPRWRQDGKEIFYAEQNNLMAVTVTTQPVFSSANPVRSFQNASLPNYDASADGKRFIVMEKPPAGSPL
AIHVAQNWFEEFRPQQKMTR
>Mature_180_residues
MDDWSPDQRFLIYEVESPETQSDLFYRERGKDGKLGEPVVYLKTPFRERQPRFSPDGRFVAYISNESGGPEIYVRQFPNG
ANKVRISTHRGVAPRWRQDGKEIFYAEQNNLMAVTVTTQPVFSSANPVRSFQNASLPNYDASADGKRFIVMEKPPAGSPL
AIHVAQNWFEEFRPQQKMTR

Specific function: Unknown

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20706; Mature: 20706

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDWSPDQRFLIYEVESPETQSDLFYRERGKDGKLGEPVVYLKTPFRERQPRFSPDGRFV
CCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCCCCCCCCEE
AYISNESGGPEIYVRQFPNGANKVRISTHRGVAPRWRQDGKEIFYAEQNNLMAVTVTTQP
EEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHCCCCEEEEEECCCEEEEEEECCC
VFSSANPVRSFQNASLPNYDASADGKRFIVMEKPPAGSPLAIHVAQNWFEEFRPQQKMTR
CCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MDDWSPDQRFLIYEVESPETQSDLFYRERGKDGKLGEPVVYLKTPFRERQPRFSPDGRFV
CCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCCCCCCCCEE
AYISNESGGPEIYVRQFPNGANKVRISTHRGVAPRWRQDGKEIFYAEQNNLMAVTVTTQP
EEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHCCCCEEEEEECCCEEEEEEECCC
VFSSANPVRSFQNASLPNYDASADGKRFIVMEKPPAGSPLAIHVAQNWFEEFRPQQKMTR
CCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA