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The map label for this gene is 116625828

Identifier: 116625828

GI number: 116625828

Start: 8504317

End: 8504514

Strand: Direct

Name: 116625828

Synonym: Acid_6781

Alternate gene names: NA

Gene position: 8504317-8504514 (Clockwise)

Preceding gene: 116625827

Following gene: 116625829

Centisome position: 85.34

GC content: 58.08

Gene sequence:

>198_bases
GTGATCATCCTGCTATGCGTTCGCTGGTATTTGCGATACTCGCTCAGCTATCGCGACCTGGAAGAAATGATGGCGGAACG
AGGCCAGTCCGTGGACCATGTCACGATCTGGCGGTGGGTCCAACGCTATGCGCCCGTTTTGAATCAACGAATTCGCCGTG
AGCTGCGGCGCCCGAATCGATCGCCCGCGATGTGCTGA

Upstream 100 bases:

>100_bases
ACTCCCAAGGGTTCTGTTGCAAACGGGTTGATCTGATCTGGTACGGTATATCGTGACTCGAAAACGGCCAGCACTGTTCC
GTGGGCGGCACTTCGAAGAC

Downstream 100 bases:

>100_bases
GCCGGCTCTATCTGCAGGCTGGCGAGGTGGAGAAAGCCACAGAGCAGTGCCGCCTCGCTTTGCGTGACGACCCGTCGGAC
GAAGTGGCCCTGTACCGACT

Product: transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Core Domain Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase IS6 Family; Transposase A; Transposase For Insertion Sequence IS; Truncated TnpA; Integrase; ISYps1 Transposase; Transposase-Like Protein; Integrase Catalytic Subunit; Insertion Sequence Transposase-Like Protein; Truncated; Insertion Element; IS26 Transposase

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MIILLCVRWYLRYSLSYRDLEEMMAERGQSVDHVTIWRWVQRYAPVLNQRIRRELRRPNRSPAMC

Sequences:

>Translated_65_residues
MIILLCVRWYLRYSLSYRDLEEMMAERGQSVDHVTIWRWVQRYAPVLNQRIRRELRRPNRSPAMC
>Mature_65_residues
MIILLCVRWYLRYSLSYRDLEEMMAERGQSVDHVTIWRWVQRYAPVLNQRIRRELRRPNRSPAMC

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8083; Mature: 8083

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILLCVRWYLRYSLSYRDLEEMMAERGQSVDHVTIWRWVQRYAPVLNQRIRRELRRPNR
CHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SPAMC
CCCCC
>Mature Secondary Structure
MIILLCVRWYLRYSLSYRDLEEMMAERGQSVDHVTIWRWVQRYAPVLNQRIRRELRRPNR
CHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SPAMC
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA