Click here to switch to the map view.

The map label for this gene is 116625802

Identifier: 116625802

GI number: 116625802

Start: 8459886

End: 8460866

Strand: Direct

Name: 116625802

Synonym: Acid_6752

Alternate gene names: NA

Gene position: 8459886-8460866 (Clockwise)

Preceding gene: 116625799

Following gene: 116625804

Centisome position: 84.89

GC content: 62.28

Gene sequence:

>981_bases
ATGCACGGGGCAATCATCGAGGCGACCGGGATCCGCAGGCTTAGGGCGTGTATCCTGCTCTTTTCCGTTTATGCGGCGGT
GGGCGGCGAACCGCAGGACGCTACCGGTTCCGCATCGAGAGCGTACCCGAGTTCCACGACCATCCGGGTGCATTCGGACC
TGGTGCAGATCCCGGTAACCGTCACGGACGGGAGCGGGCGGGTGGTGTTGGGTTTGGAGAAGGAGCACTTCTCGCTCTTC
GAAGATAAAGTGCAGCAGGTGATTACGCACTTCGCGACGGACGACGCGCCGGCCTCGGTGGGTTTGGTCTTCGATACGAG
CGACAGCATGCAGCCGCGGATGAACAAGGCGCACGAAGCCGTGGAGGCGCTGCTGAAGAATGCCAATCCCGCAGACGAGT
TCTTCCTGGTACAGTTCAGCGATCGCGCCAGGCTGGTCGCCGGCATGACGAAGGACAGCGAGGAAATCTCGCGGCGCGCG
GCGAGTATGCGGATCGGCGGATCGACGGCTCTATTGGACGCGGTTGCGATGGCAATGGAGGAGATGAAAAGCGCGCACTA
TCTGCGTAAGGTGATGGTGATCATCTCCGACGGCGATGACAATTCCAGCCGCTGCCCGGTGAACGACCTCAAGAGGATCG
TGCGCGAAGGCGACGTCACGATCTATGCCATCGGGATCACGGATGACAATGTACCGCTGGCCTACCCGCAACGCGACCGG
CTCACCGGCGCCGCCCTGCTCAACGAAATAGCGACGCAGACTGGCGGCCGGCTGTTTGAGGTTCACAAGCTGAAGCAGCT
GCCCGAAATCGCGGCCAAGATCAGCGGGTGGACGCGCAAGCAGTACGTGCTGGGATACGCGCCGGAGAATCCGGAGAAGA
ACGGAGCGTACCGGCACGTGCAGGTGAAGCTCACTAAGCCGAAGGGCTACCCGCGGCTGCATGCGTCCTGGCGGCTGGGC
TATTACGCGCCGACCGAATGA

Upstream 100 bases:

>100_bases
TCGCGGCTCGTCGACGTCTGCCGGGTAGAATACTTTCGCTTCACCCGAAAAATTGCGCTCCGGGGTTTGGAGGCGCATCC
ATCGCCCGTAGGGGAGAAGC

Downstream 100 bases:

>100_bases
CGCCTGGCTGCAACGCTAGAGATATTTTACGAAGAGGACCGCGTTGCCGCGTTCGTTGTAGAGGAGCTCGTTGACCAGAT
TCTTGGTGAGGAGGATCCCG

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain Protein

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MHGAIIEATGIRRLRACILLFSVYAAVGGEPQDATGSASRAYPSSTTIRVHSDLVQIPVTVTDGSGRVVLGLEKEHFSLF
EDKVQQVITHFATDDAPASVGLVFDTSDSMQPRMNKAHEAVEALLKNANPADEFFLVQFSDRARLVAGMTKDSEEISRRA
ASMRIGGSTALLDAVAMAMEEMKSAHYLRKVMVIISDGDDNSSRCPVNDLKRIVREGDVTIYAIGITDDNVPLAYPQRDR
LTGAALLNEIATQTGGRLFEVHKLKQLPEIAAKISGWTRKQYVLGYAPENPEKNGAYRHVQVKLTKPKGYPRLHASWRLG
YYAPTE

Sequences:

>Translated_326_residues
MHGAIIEATGIRRLRACILLFSVYAAVGGEPQDATGSASRAYPSSTTIRVHSDLVQIPVTVTDGSGRVVLGLEKEHFSLF
EDKVQQVITHFATDDAPASVGLVFDTSDSMQPRMNKAHEAVEALLKNANPADEFFLVQFSDRARLVAGMTKDSEEISRRA
ASMRIGGSTALLDAVAMAMEEMKSAHYLRKVMVIISDGDDNSSRCPVNDLKRIVREGDVTIYAIGITDDNVPLAYPQRDR
LTGAALLNEIATQTGGRLFEVHKLKQLPEIAAKISGWTRKQYVLGYAPENPEKNGAYRHVQVKLTKPKGYPRLHASWRLG
YYAPTE
>Mature_326_residues
MHGAIIEATGIRRLRACILLFSVYAAVGGEPQDATGSASRAYPSSTTIRVHSDLVQIPVTVTDGSGRVVLGLEKEHFSLF
EDKVQQVITHFATDDAPASVGLVFDTSDSMQPRMNKAHEAVEALLKNANPADEFFLVQFSDRARLVAGMTKDSEEISRRA
ASMRIGGSTALLDAVAMAMEEMKSAHYLRKVMVIISDGDDNSSRCPVNDLKRIVREGDVTIYAIGITDDNVPLAYPQRDR
LTGAALLNEIATQTGGRLFEVHKLKQLPEIAAKISGWTRKQYVLGYAPENPEKNGAYRHVQVKLTKPKGYPRLHASWRLG
YYAPTE

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35800; Mature: 35800

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGAIIEATGIRRLRACILLFSVYAAVGGEPQDATGSASRAYPSSTTIRVHSDLVQIPVT
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEE
VTDGSGRVVLGLEKEHFSLFEDKVQQVITHFATDDAPASVGLVFDTSDSMQPRMNKAHEA
EECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHH
VEALLKNANPADEFFLVQFSDRARLVAGMTKDSEEISRRAASMRIGGSTALLDAVAMAME
HHHHHHCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHH
EMKSAHYLRKVMVIISDGDDNSSRCPVNDLKRIVREGDVTIYAIGITDDNVPLAYPQRDR
HHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHH
LTGAALLNEIATQTGGRLFEVHKLKQLPEIAAKISGWTRKQYVLGYAPENPEKNGAYRHV
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEE
QVKLTKPKGYPRLHASWRLGYYAPTE
EEEEECCCCCCEEEEEEEECEECCCC
>Mature Secondary Structure
MHGAIIEATGIRRLRACILLFSVYAAVGGEPQDATGSASRAYPSSTTIRVHSDLVQIPVT
CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEE
VTDGSGRVVLGLEKEHFSLFEDKVQQVITHFATDDAPASVGLVFDTSDSMQPRMNKAHEA
EECCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHH
VEALLKNANPADEFFLVQFSDRARLVAGMTKDSEEISRRAASMRIGGSTALLDAVAMAME
HHHHHHCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHH
EMKSAHYLRKVMVIISDGDDNSSRCPVNDLKRIVREGDVTIYAIGITDDNVPLAYPQRDR
HHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHH
LTGAALLNEIATQTGGRLFEVHKLKQLPEIAAKISGWTRKQYVLGYAPENPEKNGAYRHV
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEE
QVKLTKPKGYPRLHASWRLGYYAPTE
EEEEECCCCCCEEEEEEEECEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA