Click here to switch to the map view.

The map label for this gene is 116625738

Identifier: 116625738

GI number: 116625738

Start: 8391011

End: 8392171

Strand: Reverse

Name: 116625738

Synonym: Acid_6688

Alternate gene names: NA

Gene position: 8392171-8391011 (Counterclockwise)

Preceding gene: 116625741

Following gene: 116625737

Centisome position: 84.21

GC content: 60.47

Gene sequence:

>1161_bases
ATGAAAAAGGATAGCATCGCAAGACTGCAGGTGACGAAGAGCCAGATTCGCCGAATGGCAGCAAAACAGAGGCTGACGGT
AGGGTTGGACCTCGGAGATCGTTCGAGCCGCTACTGCATTTTGGATGAAGCGGGAGAGAAAGCGAGCGAAGACCAGCTGC
CGACGAGCAAGGCGGGACTGGACATGCTCTTTGCCAAGATGGCACCCTGCCGGATCGCGCTGGAGGTGGGAACGCATTCG
CCGTGGGTAAGCCGGCACCTGGCGGCGATGGGGCATGAAGTGATCGTGGCCAATCCGCGGAAGGTAAGGCTGATCACGCA
GAGTGTGAAGAAGAACGACCGGATGGACGCCGAGCAGTTGGCGCGGCTGGCGCGAGTGGATCCGCGGCTGTTGGCGCCGA
TTCGCCACCGGGGGCCGGAAGCGCAAGCCGACCTGGCAGTGATCCGAGGGCGGGCGGAATTGGTGGAAGGGCGGACGAAG
TTGATCAATGCGGCGCGGGGTCTGACCAAGCCGATGGGCGAACGGCTGAAGAGCTGTGATGCCGATACCGTAAAGGAATC
GATGGCGGACGGGCTCAGCGAGGCAACGCAAAAGGTGATACGGCCGTTGTTGAAGAGCGTGGAAGTGATCACGCAGCAAA
TCAAGGTGTACGACCAGCAGATCCAGGAGATCGAGAAACGCTACCCGGAGACGAAGTTGGTGAAGCAAGTGCATGGAGTG
GGCCCACTGGTCTCGTTGGCCTTCATCCTGACATTGGAAGACGCAGAGCGGTTTGAGCACAGCCGGGAGGTGGGACCGTA
TCTGGGGCTAACGAGGAAGCAGCGGGAGAGCGGGGAGAGCGCGCCGGAGTTAGGGATCAGCAAGGCGGGGGATGAGTTAG
TGCGACGGCTGTTGGTGCAGGCCGCGCACTGCATTCTGCGGGAAGATGCACCGGATAGCGATCTGAAGGCCGTGGGGGCT
GACGAAGGTGGGTGCCGGAGCAGGGAAGAAAGGCAGCAAGAGCCGGAAGAAGAAAGCGGTGGTGGCGGTGGCGCGGAAGT
TGGCGGTGTTGCTACACCATTTGTGGGTAACAGGGGAAGTGTACGACCCGCAATACAACCGGAAAGCGATAGAGGCGAGC
AAAAGGACCAAGCAAGCTGCCGCCTAAGGAAACGAGATTGA

Upstream 100 bases:

>100_bases
GGTATATGACGGAGATGGTATGAGAAGGCCGGTCCCCCGCGCGGGATGTTTTAAAATCCCGGTAGACGCACTCGATCAGG
TGCAAAAAGGAGACCGGCTT

Downstream 100 bases:

>100_bases
AAAGGATTGGACTTCTGCGGAGTATGCGAAAGCGCCGAGTTGGGGTGACTGCGAGGTCGCGGCAGAACGACGGGAACCAG
GCGACTGGGACCCTGCAGTT

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGLDMLFAKMAPCRIALEVGTHS
PWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQLARLARVDPRLLAPIRHRGPEAQADLAVIRGRAELVEGRTK
LINAARGLTKPMGERLKSCDADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLVKQVHGV
GPLVSLAFILTLEDAERFEHSREVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQAAHCILREDAPDSDLKAVGA
DEGGCRSREERQQEPEEESGGGGGAEVGGVATPFVGNRGSVRPAIQPESDRGEQKDQASCRLRKRD

Sequences:

>Translated_386_residues
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGLDMLFAKMAPCRIALEVGTHS
PWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQLARLARVDPRLLAPIRHRGPEAQADLAVIRGRAELVEGRTK
LINAARGLTKPMGERLKSCDADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLVKQVHGV
GPLVSLAFILTLEDAERFEHSREVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQAAHCILREDAPDSDLKAVGA
DEGGCRSREERQQEPEEESGGGGGAEVGGVATPFVGNRGSVRPAIQPESDRGEQKDQASCRLRKRD
>Mature_386_residues
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGLDMLFAKMAPCRIALEVGTHS
PWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQLARLARVDPRLLAPIRHRGPEAQADLAVIRGRAELVEGRTK
LINAARGLTKPMGERLKSCDADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLVKQVHGV
GPLVSLAFILTLEDAERFEHSREVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQAAHCILREDAPDSDLKAVGA
DEGGCRSREERQQEPEEESGGGGGAEVGGVATPFVGNRGSVRPAIQPESDRGEQKDQASCRLRKRD

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 42463; Mature: 42463

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGL
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHH
DMLFAKMAPCRIALEVGTHSPWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQL
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCHHHH
ARLARVDPRLLAPIRHRGPEAQADLAVIRGRAELVEGRTKLINAARGLTKPMGERLKSCD
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
ADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLVKQVHGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
GPLVSLAFILTLEDAERFEHSREVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQ
CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AAHCILREDAPDSDLKAVGADEGGCRSREERQQEPEEESGGGGGAEVGGVATPFVGNRGS
HHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCC
VRPAIQPESDRGEQKDQASCRLRKRD
CCCCCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKKDSIARLQVTKSQIRRMAAKQRLTVGLDLGDRSSRYCILDEAGEKASEDQLPTSKAGL
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHH
DMLFAKMAPCRIALEVGTHSPWVSRHLAAMGHEVIVANPRKVRLITQSVKKNDRMDAEQL
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCHHHH
ARLARVDPRLLAPIRHRGPEAQADLAVIRGRAELVEGRTKLINAARGLTKPMGERLKSCD
HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
ADTVKESMADGLSEATQKVIRPLLKSVEVITQQIKVYDQQIQEIEKRYPETKLVKQVHGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
GPLVSLAFILTLEDAERFEHSREVGPYLGLTRKQRESGESAPELGISKAGDELVRRLLVQ
CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AAHCILREDAPDSDLKAVGADEGGCRSREERQQEPEEESGGGGGAEVGGVATPFVGNRGS
HHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCC
VRPAIQPESDRGEQKDQASCRLRKRD
CCCCCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]