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The map label for this gene is yfcH [C]

Identifier: 116625723

GI number: 116625723

Start: 8376027

End: 8376959

Strand: Reverse

Name: yfcH [C]

Synonym: Acid_6672

Alternate gene names: 116625723

Gene position: 8376959-8376027 (Counterclockwise)

Preceding gene: 116625724

Following gene: 116625722

Centisome position: 84.06

GC content: 67.63

Gene sequence:

>933_bases
GTGAATATCACGCTCACCGGCGCGTCCGGGCTGATCGGGCGCCGCCTGCTGAAGAACTTCGCGACGGCGGGGCATGGGCT
GCGCGTGCTCAGCCGCCATGCAGGCACCAATCTACCGCAGGGAGTCGCGATCTCGGTATGGGACCCGGCGCAGGGGCCGC
CGCCGGAGGAGAGCCTGGCCGGCGCGGACGCGGTGGTCCATCTGGCGGGAGAGCCGGTGGCGCAGCGGTGGACGGACGCG
GTGAAGCGGGGGATCCGGGATAGCCGGGTCACCGGCACGCGGAACCTGGTGGCGCGGTTGGCGACGCTGCGGAACAAGCC
GAAGGTGCTGGTGTGCGCGTCGGCGATCGGCTTCTACGGATCGCGCGGAGACGAGGTGCTGAAGGAATCGTCGGGGGCGG
GGAAGGGATTCCTGGCGGAGACGTGCGTAGCGTGGGAGAAGGAGGCGGTAGCGGCGGAGGCGGTCGGAGTGAGGGTAGTG
CGAGTGCGAATCGGGATCGTGCTGGATGAGCGCGGCGGGGCGCTGCAGAAGATGCTGCCTCCGTTCCGGATGGGCGTTGG
GGGACGGTTGGGAGATGGGAAGCAGTGGATGTCGTGGATTCACATCGCGGATCTGGCGGCGATGTTCCAGATGGCCGTGG
AAGGGCCGGTGCTGGGTGTGTTGAATGGCGTGGCGCCGAATCCCGTGGTGAACTCGGAGTTCACGCGGGAGTTGGCGAGG
GCGGTGCATCGTCCGGCGATTTTTCCGGTGCCGGGGGCGGCGATCAAGGTGCTGTTCGGCGAAATGGCGGAGGTGTTGCT
GGCGAGCCAGCGGGTGGTCCCGGAGGCTGCGCAAAAAGCAGGGTTTAAGTTCCGGTTCCCGGAACTGGCAGGGGCTCTTC
GGGATGTGGTGGGCGCCGCATCCGCGGATAGTGCGGGAACATCAAAAGCTTAG

Upstream 100 bases:

>100_bases
TCCGCAGCATGGTGCGGTCGGGGATGGAACGAAAGACCGATGTGCATGCGTACATTCGGGAGATTCAATATCTCGAAAGC
ACGGGAAGGGAGCTGACCTC

Downstream 100 bases:

>100_bases
GCTGTATAATAATAAAGAGTACTGAGAGGTCCTGTGTCTTTACGCACGTATTTCCGTCTTTTCACCCATACCCAACTTTT
ACCGGTCCTGGAAACAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNITLTGASGLIGRRLLKNFATAGHGLRVLSRHAGTNLPQGVAISVWDPAQGPPPEESLAGADAVVHLAGEPVAQRWTDA
VKRGIRDSRVTGTRNLVARLATLRNKPKVLVCASAIGFYGSRGDEVLKESSGAGKGFLAETCVAWEKEAVAAEAVGVRVV
RVRIGIVLDERGGALQKMLPPFRMGVGGRLGDGKQWMSWIHIADLAAMFQMAVEGPVLGVLNGVAPNPVVNSEFTRELAR
AVHRPAIFPVPGAAIKVLFGEMAEVLLASQRVVPEAAQKAGFKFRFPELAGALRDVVGAASADSAGTSKA

Sequences:

>Translated_310_residues
MNITLTGASGLIGRRLLKNFATAGHGLRVLSRHAGTNLPQGVAISVWDPAQGPPPEESLAGADAVVHLAGEPVAQRWTDA
VKRGIRDSRVTGTRNLVARLATLRNKPKVLVCASAIGFYGSRGDEVLKESSGAGKGFLAETCVAWEKEAVAAEAVGVRVV
RVRIGIVLDERGGALQKMLPPFRMGVGGRLGDGKQWMSWIHIADLAAMFQMAVEGPVLGVLNGVAPNPVVNSEFTRELAR
AVHRPAIFPVPGAAIKVLFGEMAEVLLASQRVVPEAAQKAGFKFRFPELAGALRDVVGAASADSAGTSKA
>Mature_310_residues
MNITLTGASGLIGRRLLKNFATAGHGLRVLSRHAGTNLPQGVAISVWDPAQGPPPEESLAGADAVVHLAGEPVAQRWTDA
VKRGIRDSRVTGTRNLVARLATLRNKPKVLVCASAIGFYGSRGDEVLKESSGAGKGFLAETCVAWEKEAVAAEAVGVRVV
RVRIGIVLDERGGALQKMLPPFRMGVGGRLGDGKQWMSWIHIADLAAMFQMAVEGPVLGVLNGVAPNPVVNSEFTRELAR
AVHRPAIFPVPGAAIKVLFGEMAEVLLASQRVVPEAAQKAGFKFRFPELAGALRDVVGAASADSAGTSKA

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=303, Percent_Identity=34.6534653465347, Blast_Score=160, Evalue=1e-39,
Organism=Escherichia coli, GI1788642, Length=304, Percent_Identity=40.1315789473684, Blast_Score=219, Evalue=2e-58,
Organism=Drosophila melanogaster, GI28573846, Length=299, Percent_Identity=31.7725752508361, Blast_Score=160, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32516; Mature: 32516

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITLTGASGLIGRRLLKNFATAGHGLRVLSRHAGTNLPQGVAISVWDPAQGPPPEESLA
CEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHC
GADAVVHLAGEPVAQRWTDAVKRGIRDSRVTGTRNLVARLATLRNKPKVLVCASAIGFYG
CCCCEEEECCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEHHHHCCC
SRGDEVLKESSGAGKGFLAETCVAWEKEAVAAEAVGVRVVRVRIGIVLDERGGALQKMLP
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHCC
PFRMGVGGRLGDGKQWMSWIHIADLAAMFQMAVEGPVLGVLNGVAPNPVVNSEFTRELAR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHH
AVHRPAIFPVPGAAIKVLFGEMAEVLLASQRVVPEAAQKAGFKFRFPELAGALRDVVGAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECHHHHHHHHHHHHCC
SADSAGTSKA
CCCCCCCCCC
>Mature Secondary Structure
MNITLTGASGLIGRRLLKNFATAGHGLRVLSRHAGTNLPQGVAISVWDPAQGPPPEESLA
CEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHC
GADAVVHLAGEPVAQRWTDAVKRGIRDSRVTGTRNLVARLATLRNKPKVLVCASAIGFYG
CCCCEEEECCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEHHHHCCC
SRGDEVLKESSGAGKGFLAETCVAWEKEAVAAEAVGVRVVRVRIGIVLDERGGALQKMLP
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHCC
PFRMGVGGRLGDGKQWMSWIHIADLAAMFQMAVEGPVLGVLNGVAPNPVVNSEFTRELAR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHH
AVHRPAIFPVPGAAIKVLFGEMAEVLLASQRVVPEAAQKAGFKFRFPELAGALRDVVGAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECHHHHHHHHHHHHCC
SADSAGTSKA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]