Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is 116625654

Identifier: 116625654

GI number: 116625654

Start: 8286565

End: 8288664

Strand: Direct

Name: 116625654

Synonym: Acid_6603

Alternate gene names: NA

Gene position: 8286565-8288664 (Clockwise)

Preceding gene: 116625653

Following gene: 116625657

Centisome position: 83.15

GC content: 63.71

Gene sequence:

>2100_bases
ATGCCTCAAATTCATTTGTGCTTCTTATGGCACATGCACCAGCCGTTTTATAAAGACCTGGATTCCGGGGAGTACAAGCT
GCCCTGGACACGCATGCACGCGCTCAAAGACTACTACGGGATGGCGCACATCCTGGAAGAATTCCCGAATGTGAAGCAGA
CCTTCAATCTGGTGCCATCGATGATGGCGCAGGTGGAGGAATACGCTTCGGGGGAGGCGCGCGACCCGTTTCTCGCGGTG
GCGCTAAAACCTGCCGAGACGCTGACGCCGGAGGAGACCGGGTTCCTGATGCAGCACTCGTTCTACTCCGACCCCGGCCA
CATGATCTACCGGTATCCGCGCTACGGACAGTTGTTCGACGCGCGCAATGCGCAACAGAGCGCGGGCGGGCGCAGCCTGT
TCAGCGTCCAGGAATTGCGCGACCTGCAGATGTGGTCGCAGCTGGCGTGGTTCGACGAGGAATTTCAGGCCAAAGACCCC
GAGGTTCGCCAATGGATCGAGCGCGGCAGCAATTTCACGCTCGAAGATCAGCGGCGGATGGGACTGAAGCAGCGCGAAAT
CATTGGCCTCGTGCTGCCGACCTATGCCAGGCTGGCGCAGAGCGGGCAGATCGAAATCTCCACCACGCCGTACTATCATC
CGATTCTGCCCCTGCTCTGCGATTCCAATATCGCGGCCGTGGCGCACCCTAACGTTCCGCTGCCGCCGCGCTTCCGCTAC
CCGGACGACGCGCGCAAACAACTGCTGCTGGCGCGCGAGTACGTGGAGCAGCATTTCGGCGTGCCGCCGGTGGGGTTATG
GCCGTCGGAGGGCTCGGTTTCCGACGAGGTCTTCACGATCGCGAGCGAACTCGGTTTCGAGTGGTCGGCCACGGACAGCG
GAGTGCTGGACCGGACCAAACAGCGAGCAGTCCCGGTGGAAGGGCTCTACCGGCCCTACGAATGGCGGCAGGGAGAGCGC
TCGCTGCGCCTGATGTTCCGCGACCATTTCATGAGCGACCTGATCGGGTTCGTCTACTCCAAAATGGAAGCATCGCACGC
CGCGGCGGATTTCCTGCACCGCATCAGGCAGAACTGCGCGGGAATTCTGGCGAGCGGCCGCGACGCGCTGGTGCCTATTA
TCCTCGATGGCGAAAACGCCTGGGAGTATTACGATCTCAACGGACGTCCCTTTCTGCGCGAACTCTATCGCCGCATCAGC
GAGGACGGCGGCATGCGCGCGGTGACCGCGAGCGAGGCCTTCCGGCTGACCGCGCCCGAGCCGCTCGACCACATTTTCCC
GGGTTCGTGGATTAACGCGAACTTCGATGTCTGGATCGGCGCGGAGGAAGACAACCAGGCGTGGACGCAGTTGTTGCGCG
CCCGGGCGACCTATGACGGCACCACCGGGGTGCCCGAAGAGCGGCGCCGCATGGCATTCGAGGAGCTGATGATCGCCGAG
GGCAGCGACTGGTGCTGGTGGTATGGCCCGGAGCACGACTCGGCCAATCGCGTGGAGTTCGACCAGCTCTATCGCAGCCA
TCTGGCGAACGTCTACCGGTTCCTGAACCTGGCGCCACCGGAGGAACTCTCGCGGCCGATCCTGAAGATCGCCACGCCGG
ACGTGCGGATAGCGCCCACCGGGCCGATCAGCCCGACGATCGATGGCGAGGTGACGTCCTATTTCGAGTGGCTGGGCGCC
GGGCTCTACCAGGTGGACGAGCGCTCCGGTTCGATGCACGGGAAGAAGGTCCTGGTGAACGAGGTGCTGTTCGGCAGCGA
CGGGAAACGCCTGTTCGTACGCGTGGATTTCCGGCCCGGCGTGCAGGGCGAACTGGCCGGCATGGAGGCGCGGATCGCGC
TGCAGTCCCTGGAAAACACTCCGCCGCATCACGTCACGATCCGGTTCGCCGACGGCTCCGCTTGCACAGGCGATGCCCTG
GAGTGCGCGTTCCGCAACGTGCTGGAAACCAGCTTCGAACTGGCCGCGATCGGGGTGAAACCTGGCCGCGGCGTGCGTTT
TCAGCTCTCGCTGTGGGCATCCGGGCTGCCGGTAGACGCGGTGCCGCAGCAGGGCTGGCTGGAGATGCACACGACCGACC
GCGAAGAAATGGCGGGATAG

Upstream 100 bases:

>100_bases
CAAAGACGCGCCGCCTCCCCCAATGCGCAGCATCTTTGGGAAATAGTACGACGGAGACCGCGTCTCTCGTTTCTTGCGCC
GTGAAACCGATTAACGCCTA

Downstream 100 bases:

>100_bases
CCGTGTTAAACTGTAAAAGTTATGGCAATTCCGAATGTAAAGCGGTTCCGGCCCTTCTGCCCGACCTGCAACGACACTTT
CACGCTGATGGCCGTCCTGC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Amylopullulanase; Glycoside Hydrolase; Glycosy Hydrolase Family Protein; Pullulanase; Glycosyl Hydrolase Family; Family; Alpha-Amylase/Alpha-Mannosidase; Membrane Bound Alpha-Amylase; Pullulanase Glycoside Hydrolase Family; Alpha-Dextran Endo-1 6-Alpha-Glucosidase; Alpha-Mannosidase; Amylopullulanase Related Protein

Number of amino acids: Translated: 699; Mature: 698

Protein sequence:

>699_residues
MPQIHLCFLWHMHQPFYKDLDSGEYKLPWTRMHALKDYYGMAHILEEFPNVKQTFNLVPSMMAQVEEYASGEARDPFLAV
ALKPAETLTPEETGFLMQHSFYSDPGHMIYRYPRYGQLFDARNAQQSAGGRSLFSVQELRDLQMWSQLAWFDEEFQAKDP
EVRQWIERGSNFTLEDQRRMGLKQREIIGLVLPTYARLAQSGQIEISTTPYYHPILPLLCDSNIAAVAHPNVPLPPRFRY
PDDARKQLLLAREYVEQHFGVPPVGLWPSEGSVSDEVFTIASELGFEWSATDSGVLDRTKQRAVPVEGLYRPYEWRQGER
SLRLMFRDHFMSDLIGFVYSKMEASHAAADFLHRIRQNCAGILASGRDALVPIILDGENAWEYYDLNGRPFLRELYRRIS
EDGGMRAVTASEAFRLTAPEPLDHIFPGSWINANFDVWIGAEEDNQAWTQLLRARATYDGTTGVPEERRRMAFEELMIAE
GSDWCWWYGPEHDSANRVEFDQLYRSHLANVYRFLNLAPPEELSRPILKIATPDVRIAPTGPISPTIDGEVTSYFEWLGA
GLYQVDERSGSMHGKKVLVNEVLFGSDGKRLFVRVDFRPGVQGELAGMEARIALQSLENTPPHHVTIRFADGSACTGDAL
ECAFRNVLETSFELAAIGVKPGRGVRFQLSLWASGLPVDAVPQQGWLEMHTTDREEMAG

Sequences:

>Translated_699_residues
MPQIHLCFLWHMHQPFYKDLDSGEYKLPWTRMHALKDYYGMAHILEEFPNVKQTFNLVPSMMAQVEEYASGEARDPFLAV
ALKPAETLTPEETGFLMQHSFYSDPGHMIYRYPRYGQLFDARNAQQSAGGRSLFSVQELRDLQMWSQLAWFDEEFQAKDP
EVRQWIERGSNFTLEDQRRMGLKQREIIGLVLPTYARLAQSGQIEISTTPYYHPILPLLCDSNIAAVAHPNVPLPPRFRY
PDDARKQLLLAREYVEQHFGVPPVGLWPSEGSVSDEVFTIASELGFEWSATDSGVLDRTKQRAVPVEGLYRPYEWRQGER
SLRLMFRDHFMSDLIGFVYSKMEASHAAADFLHRIRQNCAGILASGRDALVPIILDGENAWEYYDLNGRPFLRELYRRIS
EDGGMRAVTASEAFRLTAPEPLDHIFPGSWINANFDVWIGAEEDNQAWTQLLRARATYDGTTGVPEERRRMAFEELMIAE
GSDWCWWYGPEHDSANRVEFDQLYRSHLANVYRFLNLAPPEELSRPILKIATPDVRIAPTGPISPTIDGEVTSYFEWLGA
GLYQVDERSGSMHGKKVLVNEVLFGSDGKRLFVRVDFRPGVQGELAGMEARIALQSLENTPPHHVTIRFADGSACTGDAL
ECAFRNVLETSFELAAIGVKPGRGVRFQLSLWASGLPVDAVPQQGWLEMHTTDREEMAG
>Mature_698_residues
PQIHLCFLWHMHQPFYKDLDSGEYKLPWTRMHALKDYYGMAHILEEFPNVKQTFNLVPSMMAQVEEYASGEARDPFLAVA
LKPAETLTPEETGFLMQHSFYSDPGHMIYRYPRYGQLFDARNAQQSAGGRSLFSVQELRDLQMWSQLAWFDEEFQAKDPE
VRQWIERGSNFTLEDQRRMGLKQREIIGLVLPTYARLAQSGQIEISTTPYYHPILPLLCDSNIAAVAHPNVPLPPRFRYP
DDARKQLLLAREYVEQHFGVPPVGLWPSEGSVSDEVFTIASELGFEWSATDSGVLDRTKQRAVPVEGLYRPYEWRQGERS
LRLMFRDHFMSDLIGFVYSKMEASHAAADFLHRIRQNCAGILASGRDALVPIILDGENAWEYYDLNGRPFLRELYRRISE
DGGMRAVTASEAFRLTAPEPLDHIFPGSWINANFDVWIGAEEDNQAWTQLLRARATYDGTTGVPEERRRMAFEELMIAEG
SDWCWWYGPEHDSANRVEFDQLYRSHLANVYRFLNLAPPEELSRPILKIATPDVRIAPTGPISPTIDGEVTSYFEWLGAG
LYQVDERSGSMHGKKVLVNEVLFGSDGKRLFVRVDFRPGVQGELAGMEARIALQSLENTPPHHVTIRFADGSACTGDALE
CAFRNVLETSFELAAIGVKPGRGVRFQLSLWASGLPVDAVPQQGWLEMHTTDREEMAG

Specific function: Unknown

COG id: COG1449

COG function: function code G; Alpha-amylase/alpha-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79613; Mature: 79482

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIHLCFLWHMHQPFYKDLDSGEYKLPWTRMHALKDYYGMAHILEEFPNVKQTFNLVPS
CCCEEEEEEEHHCCHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MMAQVEEYASGEARDPFLAVALKPAETLTPEETGFLMQHSFYSDPGHMIYRYPRYGQLFD
HHHHHHHHHCCCCCCCEEEEEECCHHCCCCCCCCEEEECCCCCCCCCEEEECCCCCCHHC
ARNAQQSAGGRSLFSVQELRDLQMWSQLAWFDEEFQAKDPEVRQWIERGSNFTLEDQRRM
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCHHHHC
GLKQREIIGLVLPTYARLAQSGQIEISTTPYYHPILPLLCDSNIAAVAHPNVPLPPRFRY
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCC
PDDARKQLLLAREYVEQHFGVPPVGLWPSEGSVSDEVFTIASELGFEWSATDSGVLDRTK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCHHHHHH
QRAVPVEGLYRPYEWRQGERSLRLMFRDHFMSDLIGFVYSKMEASHAAADFLHRIRQNCA
HHCCCHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILASGRDALVPIILDGENAWEYYDLNGRPFLRELYRRISEDGGMRAVTASEAFRLTAPE
HHHHCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEECCCC
PLDHIFPGSWINANFDVWIGAEEDNQAWTQLLRARATYDGTTGVPEERRRMAFEELMIAE
CHHHCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
GSDWCWWYGPEHDSANRVEFDQLYRSHLANVYRFLNLAPPEELSRPILKIATPDVRIAPT
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCCCEEECCC
GPISPTIDGEVTSYFEWLGAGLYQVDERSGSMHGKKVLVNEVLFGSDGKRLFVRVDFRPG
CCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
VQGELAGMEARIALQSLENTPPHHVTIRFADGSACTGDALECAFRNVLETSFELAAIGVK
CCCHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECC
PGRGVRFQLSLWASGLPVDAVPQQGWLEMHTTDREEMAG
CCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCHHHHCC
>Mature Secondary Structure 
PQIHLCFLWHMHQPFYKDLDSGEYKLPWTRMHALKDYYGMAHILEEFPNVKQTFNLVPS
CCEEEEEEEHHCCHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MMAQVEEYASGEARDPFLAVALKPAETLTPEETGFLMQHSFYSDPGHMIYRYPRYGQLFD
HHHHHHHHHCCCCCCCEEEEEECCHHCCCCCCCCEEEECCCCCCCCCEEEECCCCCCHHC
ARNAQQSAGGRSLFSVQELRDLQMWSQLAWFDEEFQAKDPEVRQWIERGSNFTLEDQRRM
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCHHHHC
GLKQREIIGLVLPTYARLAQSGQIEISTTPYYHPILPLLCDSNIAAVAHPNVPLPPRFRY
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCC
PDDARKQLLLAREYVEQHFGVPPVGLWPSEGSVSDEVFTIASELGFEWSATDSGVLDRTK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCHHHHHH
QRAVPVEGLYRPYEWRQGERSLRLMFRDHFMSDLIGFVYSKMEASHAAADFLHRIRQNCA
HHCCCHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILASGRDALVPIILDGENAWEYYDLNGRPFLRELYRRISEDGGMRAVTASEAFRLTAPE
HHHHCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEECCCC
PLDHIFPGSWINANFDVWIGAEEDNQAWTQLLRARATYDGTTGVPEERRRMAFEELMIAE
CHHHCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
GSDWCWWYGPEHDSANRVEFDQLYRSHLANVYRFLNLAPPEELSRPILKIATPDVRIAPT
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCCCEEECCC
GPISPTIDGEVTSYFEWLGAGLYQVDERSGSMHGKKVLVNEVLFGSDGKRLFVRVDFRPG
CCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
VQGELAGMEARIALQSLENTPPHHVTIRFADGSACTGDALECAFRNVLETSFELAAIGVK
CCCHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECC
PGRGVRFQLSLWASGLPVDAVPQQGWLEMHTTDREEMAG
CCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA