| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is fabG [H]
Identifier: 116625631
GI number: 116625631
Start: 8252462
End: 8253229
Strand: Direct
Name: fabG [H]
Synonym: Acid_6580
Alternate gene names: 116625631
Gene position: 8252462-8253229 (Clockwise)
Preceding gene: 116625630
Following gene: 116625632
Centisome position: 82.81
GC content: 64.32
Gene sequence:
>768_bases ATGATCACCACTGGATTGAAAGACACCGGATTGAAAGACCAGGTAGTCGTTGTCACCGGAGCCGCGGCAGGCATCGGACT CGCCACCGCGCGGCGTTTTGCGCAGGAGGGCTGCCGCGTAGCCTCCTGGGACGTGAAGGAGGGCGAAGCCCAAGCTGGCG GCATCTTCCAAAAGGTGGACGTCACCAGTTCGACCTCGGTGGGCGCGGCTGTCGATGCCGTCGCCGCCAGGTGGGGTGGC CTCCGCGTGCTCGTCAACAACGCCGGAATCCTGCGCGACGGCATGCTCATCAAATATAAGGAGGGCGTGCTCGCCGGCAT GATGAGCGACGAGCAGTTCGACGCAGTGATCTCCGTCAACCTCAAAGGCGTTTTCACCTGCACCCGCGCCGTGGTGCCGC ACATGATTCAAGGCGGCGGCGGAGCGATCCTCAACGCGTCGAGCGTGGTCGGGCTGTATGGGAATTTCGGCCAGACCAAC TACGTCGCCGCCAAGGCCGGAGTCATCGGGATGACCAAGGTGTGGGCGCGCGAGTTGGGCAAGCACCAGATCCGCGTTAA CGCCGTCGCGCCCGGCTTCATCGCCACCGACATGGTGAGGCAGATGCCCGAAAAGGCGCAGCAGGCGATGGTCGGACACA CTCCGCTTGGCCGCGTCGGTGAGCCCGAGGACATCGCCAACGCGTACGTATTCCTGGCATCGAACCAGGCGTCATTCATC ACCGGCGCGGTGCTCAGCGTGGACGGTGGCGCAGTCACCGGGACCTAG
Upstream 100 bases:
>100_bases CCGGCCAAGCCTGGATCACCGGCTTTGCGCAGTACGTGCTGGACCCGGAGGACCCGTTTCCGAACGGTTTCACGGTTGGG GATATTTGGGGGAAAGCGTA
Downstream 100 bases:
>100_bases AATAGAAACAGGACATTACCGTGAAACCTATTTACATTGCGACCTTTCACCAGTCGAAGTTCGGAAAACTGCTGGGCATG AGCGTGCCCGGAATTCTGGA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MITTGLKDTGLKDQVVVVTGAAAGIGLATARRFAQEGCRVASWDVKEGEAQAGGIFQKVDVTSSTSVGAAVDAVAARWGG LRVLVNNAGILRDGMLIKYKEGVLAGMMSDEQFDAVISVNLKGVFTCTRAVVPHMIQGGGGAILNASSVVGLYGNFGQTN YVAAKAGVIGMTKVWARELGKHQIRVNAVAPGFIATDMVRQMPEKAQQAMVGHTPLGRVGEPEDIANAYVFLASNQASFI TGAVLSVDGGAVTGT
Sequences:
>Translated_255_residues MITTGLKDTGLKDQVVVVTGAAAGIGLATARRFAQEGCRVASWDVKEGEAQAGGIFQKVDVTSSTSVGAAVDAVAARWGG LRVLVNNAGILRDGMLIKYKEGVLAGMMSDEQFDAVISVNLKGVFTCTRAVVPHMIQGGGGAILNASSVVGLYGNFGQTN YVAAKAGVIGMTKVWARELGKHQIRVNAVAPGFIATDMVRQMPEKAQQAMVGHTPLGRVGEPEDIANAYVFLASNQASFI TGAVLSVDGGAVTGT >Mature_255_residues MITTGLKDTGLKDQVVVVTGAAAGIGLATARRFAQEGCRVASWDVKEGEAQAGGIFQKVDVTSSTSVGAAVDAVAARWGG LRVLVNNAGILRDGMLIKYKEGVLAGMMSDEQFDAVISVNLKGVFTCTRAVVPHMIQGGGGAILNASSVVGLYGNFGQTN YVAAKAGVIGMTKVWARELGKHQIRVNAVAPGFIATDMVRQMPEKAQQAMVGHTPLGRVGEPEDIANAYVFLASNQASFI TGAVLSVDGGAVTGT
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=39.3822393822394, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=37.3983739837398, Blast_Score=143, Evalue=1e-34, Organism=Homo sapiens, GI4758504, Length=253, Percent_Identity=34.7826086956522, Blast_Score=121, Evalue=6e-28, Organism=Homo sapiens, GI32483357, Length=265, Percent_Identity=33.9622641509434, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=32.9411764705882, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI83715985, Length=254, Percent_Identity=33.4645669291339, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI59889578, Length=237, Percent_Identity=33.3333333333333, Blast_Score=104, Evalue=6e-23, Organism=Homo sapiens, GI4504505, Length=237, Percent_Identity=33.7552742616034, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=32.5102880658436, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI66933014, Length=252, Percent_Identity=31.3492063492063, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI5031737, Length=262, Percent_Identity=30.9160305343511, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI126723750, Length=254, Percent_Identity=29.5275590551181, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=31.1538461538462, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI142976729, Length=246, Percent_Identity=26.0162601626016, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI4503301, Length=197, Percent_Identity=30.4568527918782, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI31542939, Length=210, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI210032110, Length=196, Percent_Identity=27.0408163265306, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI109715829, Length=255, Percent_Identity=24.7058823529412, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI19743808, Length=212, Percent_Identity=30.188679245283, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40807363, Length=201, Percent_Identity=27.363184079602, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI150247226, Length=197, Percent_Identity=31.4720812182741, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI126723191, Length=191, Percent_Identity=30.8900523560209, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI33667109, Length=209, Percent_Identity=30.622009569378, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI166795268, Length=215, Percent_Identity=29.7674418604651, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=40.5737704918033, Blast_Score=173, Evalue=1e-44, Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=33.8645418326693, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=33.5907335907336, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=34.6456692913386, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=30.7692307692308, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=31.7460317460317, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=34.5238095238095, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=31.7269076305221, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1786812, Length=249, Percent_Identity=31.7269076305221, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=28.7937743190661, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789057, Length=267, Percent_Identity=29.5880149812734, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=30.7377049180328, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787820, Length=228, Percent_Identity=28.0701754385965, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788891, Length=267, Percent_Identity=26.2172284644195, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17555706, Length=254, Percent_Identity=42.5196850393701, Blast_Score=178, Evalue=2e-45, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=42.570281124498, Blast_Score=175, Evalue=2e-44, Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=33.4630350194552, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71994604, Length=255, Percent_Identity=32.9411764705882, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=32.5842696629214, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=31.1023622047244, Blast_Score=110, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=31.640625, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17538182, Length=250, Percent_Identity=31.6, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=31.1538461538462, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=30.6818181818182, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=29.5454545454545, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=32.7067669172932, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17536651, Length=266, Percent_Identity=32.3308270676692, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17568967, Length=223, Percent_Identity=32.2869955156951, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=31.1538461538462, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=29.4820717131474, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=31.1787072243346, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=31.5589353612167, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17536025, Length=266, Percent_Identity=31.9548872180451, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=30.4182509505703, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17561272, Length=243, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=30.4182509505703, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI193203117, Length=197, Percent_Identity=29.9492385786802, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193203115, Length=197, Percent_Identity=29.9492385786802, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=29.1666666666667, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=28.0898876404494, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=31.3207547169811, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=27.4809160305344, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=29.3233082706767, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI72000259, Length=259, Percent_Identity=28.957528957529, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=28.4090909090909, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17508651, Length=258, Percent_Identity=28.2945736434109, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538486, Length=274, Percent_Identity=25.5474452554745, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17564282, Length=198, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193207185, Length=146, Percent_Identity=32.8767123287671, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=198, Percent_Identity=34.3434343434343, Blast_Score=108, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=29.6875, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323882, Length=254, Percent_Identity=24.8031496062992, Blast_Score=65, Evalue=9e-12, Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=41.501976284585, Blast_Score=169, Evalue=1e-42, Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=38.8235294117647, Blast_Score=144, Evalue=7e-35, Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=35.9073359073359, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=37.2093023255814, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=33.4645669291339, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=33.0708661417323, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=31.9838056680162, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI18859837, Length=194, Percent_Identity=36.0824742268041, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=28.8537549407115, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24644337, Length=198, Percent_Identity=35.3535353535354, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI116007236, Length=246, Percent_Identity=28.0487804878049, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI281364494, Length=240, Percent_Identity=29.1666666666667, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24665243, Length=204, Percent_Identity=30.8823529411765, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI221331218, Length=204, Percent_Identity=30.8823529411765, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24665247, Length=205, Percent_Identity=30.7317073170732, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI221331216, Length=205, Percent_Identity=30.7317073170732, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24581726, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076933, Length=192, Percent_Identity=31.7708333333333, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24584748, Length=192, Percent_Identity=31.7708333333333, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI221510726, Length=206, Percent_Identity=26.6990291262136, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641388, Length=238, Percent_Identity=30.2521008403361, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI281364892, Length=203, Percent_Identity=26.6009852216749, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26312; Mature: 26312
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTGLKDTGLKDQVVVVTGAAAGIGLATARRFAQEGCRVASWDVKEGEAQAGGIFQKVD CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEE VTSSTSVGAAVDAVAARWGGLRVLVNNAGILRDGMLIKYKEGVLAGMMSDEQFDAVISVN CCCCCCCHHHHHHHHHHCCCEEEEEECCCEEECCEEEEECCCCEEECCCCCCCCEEEEEE LKGVFTCTRAVVPHMIQGGGGAILNASSVVGLYGNFGQTNYVAAKAGVIGMTKVWARELG CCEEEHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHCC KHQIRVNAVAPGFIATDMVRQMPEKAQQAMVGHTPLGRVGEPEDIANAYVFLASNQASFI CCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEECCCCCEE TGAVLSVDGGAVTGT EEEEEEECCCEECCC >Mature Secondary Structure MITTGLKDTGLKDQVVVVTGAAAGIGLATARRFAQEGCRVASWDVKEGEAQAGGIFQKVD CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEE VTSSTSVGAAVDAVAARWGGLRVLVNNAGILRDGMLIKYKEGVLAGMMSDEQFDAVISVN CCCCCCCHHHHHHHHHHCCCEEEEEECCCEEECCEEEEECCCCEEECCCCCCCCEEEEEE LKGVFTCTRAVVPHMIQGGGGAILNASSVVGLYGNFGQTNYVAAKAGVIGMTKVWARELG CCEEEHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHCC KHQIRVNAVAPGFIATDMVRQMPEKAQQAMVGHTPLGRVGEPEDIANAYVFLASNQASFI CCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEECCCCCEE TGAVLSVDGGAVTGT EEEEEEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]