| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is pepP [H]
Identifier: 116625552
GI number: 116625552
Start: 8146090
End: 8147679
Strand: Reverse
Name: pepP [H]
Synonym: Acid_6499
Alternate gene names: 116625552
Gene position: 8147679-8146090 (Counterclockwise)
Preceding gene: 116625555
Following gene: 116625549
Centisome position: 81.76
GC content: 63.14
Gene sequence:
>1590_bases ATGCGTATCCCCAAGATTTCATTCGGTGTTATCCTGCTGGCCGGCATCGCATTCGCAGCCGACAGCACCCCGTGGAAGGT CGCGCCGGCGCCGCCCGCCTCCTGGCAGCGCGACCGGGTGGCCGATCTCACGGCGCGCCGCAAGGCCGTGATGGACCAGA TCGGCGACCACGCCATCCTTATGTTGTTCGCCGCGGAGCCGCGTAACTATGCCAATGACGTCGATTGGCCGTTCCGGCAG GAGAATGACTTCTTCTATCTGACTGGCCTCACCCAGCCCGGCGCGACGCTCATGCTGATTCCCTCCGCGGGAAAAATGCG GGAAATCGTGTTTCTGCCGCGTGCCAACCCCGCCCAGGAAACCTGGACCGGCCACATGCTGACCCACGCGGAAGCGCGTG AAATATCGGGCATACAGGATGTGTTTGACGCATCCCAGGTGAACGGCCTGCTGAGCGCTCTCGTGCCGCGGGCACGCGCC GTGCTCACCGAACTCCCCGCTACTGGCGGACGGGGAGGCCGCGGCGGACGCGGCGGAGCCGACGCCGGCGTGCCGCTGGA CGTCCCTGTCTGGAGCCTCGAGATCGCCAAGCCCATCGAGTACGCAGCCAAGGAAGAACTACAGCTCTACATGATTCTTC CCGCGCGACCCAATGCGGTGGAGTGCCGGCGCGAGCAGGAATTCGCAGGGAAACTCGCCTCGGTCGGCGCGGGACTCACC ATCAAGGATGCGTCCACGATCTTCAACACGTTACGGCGGGTCAAATCGCAGCGCGAAATCGACCTGCTGCAGCATGCGGT CGATATCACAGCCGAGGCATTCCAGCGCGCCTACGCCTTCGCCGTTCCGGGCACTCCGGAGTACGAAATCCAGGCGCAGT TCGAGTTCACGTTCCTGCGCCGCAATGCCCACTGGGGCTACCCCTGCATCGTGGGTTCCGGGGTCAATGCCACGACGCTG CACTACGAAACCAACAAGGACACCATGAAGGATGGAGACCTTCTGTTGATGGACGATGCCGCCGAGTTCGACCAATACAG CGTGGACGTGACCCGCACTGTCCCGGTCAACGGGAAGTTTTCCAGTGAGCAGGCCGATATTTACCGGCTGGTGTGGGCCG CGCAGCAGGCCGGTTTCTCCGCGGCCAAGCCGGGGCATGCCGCCAGCGATATCCAGGGCGCGGCCAACGAGGTCTTCAAG CAAGGTCTATTCAAGCTGGGACTCATCACCGACGCCAAGAGCGATGCCCAGATGAAGATCTGGTTCAATCACGGCATCAG CCACGGCATCGGGCTCAACGTCCACGACCCGGGCGGCAAGGAACTGCAGCCCGGTATGGTGGTCACGGTGGAGCCCGGCC TCTACTTCCGTCCCGACGCGCTGGAGAATCTCCCCAAGACGCCGGAGATGGAGAAGTTCCGCGAGGCCGTGCGCCCAGCC TTCGAGAAATACAAGGGCATCGGAGTTCGACTGGAGGACGATGTTCTCATCACCAACGCGGAGCCAAGGGTAATGTCGGC CGCGGTTCCCTCAAAGCTCGAAGAGGTGGAAGCGAGTATCGCCAAGCTCCGCCAGACGGCGAAGAACTGA
Upstream 100 bases:
>100_bases AGACATTACATTGGCGCAAAGATCCCCGGTGGGGTTACTCAATCGGGTCAGGATGCGCATCTCTCGCCTACAATAGTGGG ATACCCCTTCCGGAGGATTG
Downstream 100 bases:
>100_bases CGATTGCCCAACGCCGGCGTGATGCCAAGGCCGCTGTTTTTTGATGGGACGAGGATAGCGGTATAAGTGTCCTCACGATG TTTTCGCGCCGGTCAAACGA
Product: aminopeptidase P
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase; Aminopeptidase P II; APP-II; X-Pro aminopeptidase [H]
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MRIPKISFGVILLAGIAFAADSTPWKVAPAPPASWQRDRVADLTARRKAVMDQIGDHAILMLFAAEPRNYANDVDWPFRQ ENDFFYLTGLTQPGATLMLIPSAGKMREIVFLPRANPAQETWTGHMLTHAEAREISGIQDVFDASQVNGLLSALVPRARA VLTELPATGGRGGRGGRGGADAGVPLDVPVWSLEIAKPIEYAAKEELQLYMILPARPNAVECRREQEFAGKLASVGAGLT IKDASTIFNTLRRVKSQREIDLLQHAVDITAEAFQRAYAFAVPGTPEYEIQAQFEFTFLRRNAHWGYPCIVGSGVNATTL HYETNKDTMKDGDLLLMDDAAEFDQYSVDVTRTVPVNGKFSSEQADIYRLVWAAQQAGFSAAKPGHAASDIQGAANEVFK QGLFKLGLITDAKSDAQMKIWFNHGISHGIGLNVHDPGGKELQPGMVVTVEPGLYFRPDALENLPKTPEMEKFREAVRPA FEKYKGIGVRLEDDVLITNAEPRVMSAAVPSKLEEVEASIAKLRQTAKN
Sequences:
>Translated_529_residues MRIPKISFGVILLAGIAFAADSTPWKVAPAPPASWQRDRVADLTARRKAVMDQIGDHAILMLFAAEPRNYANDVDWPFRQ ENDFFYLTGLTQPGATLMLIPSAGKMREIVFLPRANPAQETWTGHMLTHAEAREISGIQDVFDASQVNGLLSALVPRARA VLTELPATGGRGGRGGRGGADAGVPLDVPVWSLEIAKPIEYAAKEELQLYMILPARPNAVECRREQEFAGKLASVGAGLT IKDASTIFNTLRRVKSQREIDLLQHAVDITAEAFQRAYAFAVPGTPEYEIQAQFEFTFLRRNAHWGYPCIVGSGVNATTL HYETNKDTMKDGDLLLMDDAAEFDQYSVDVTRTVPVNGKFSSEQADIYRLVWAAQQAGFSAAKPGHAASDIQGAANEVFK QGLFKLGLITDAKSDAQMKIWFNHGISHGIGLNVHDPGGKELQPGMVVTVEPGLYFRPDALENLPKTPEMEKFREAVRPA FEKYKGIGVRLEDDVLITNAEPRVMSAAVPSKLEEVEASIAKLRQTAKN >Mature_529_residues MRIPKISFGVILLAGIAFAADSTPWKVAPAPPASWQRDRVADLTARRKAVMDQIGDHAILMLFAAEPRNYANDVDWPFRQ ENDFFYLTGLTQPGATLMLIPSAGKMREIVFLPRANPAQETWTGHMLTHAEAREISGIQDVFDASQVNGLLSALVPRARA VLTELPATGGRGGRGGRGGADAGVPLDVPVWSLEIAKPIEYAAKEELQLYMILPARPNAVECRREQEFAGKLASVGAGLT IKDASTIFNTLRRVKSQREIDLLQHAVDITAEAFQRAYAFAVPGTPEYEIQAQFEFTFLRRNAHWGYPCIVGSGVNATTL HYETNKDTMKDGDLLLMDDAAEFDQYSVDVTRTVPVNGKFSSEQADIYRLVWAAQQAGFSAAKPGHAASDIQGAANEVFK QGLFKLGLITDAKSDAQMKIWFNHGISHGIGLNVHDPGGKELQPGMVVTVEPGLYFRPDALENLPKTPEMEKFREAVRPA FEKYKGIGVRLEDDVLITNAEPRVMSAAVPSKLEEVEASIAKLRQTAKN
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=483, Percent_Identity=27.536231884058, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI149589008, Length=516, Percent_Identity=27.3255813953488, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI260593665, Length=301, Percent_Identity=31.5614617940199, Blast_Score=159, Evalue=9e-39, Organism=Homo sapiens, GI260593663, Length=262, Percent_Identity=32.0610687022901, Blast_Score=139, Evalue=4e-33, Organism=Escherichia coli, GI1789275, Length=495, Percent_Identity=31.7171717171717, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1788728, Length=281, Percent_Identity=28.4697508896797, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1790282, Length=299, Percent_Identity=25.0836120401338, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17508215, Length=545, Percent_Identity=26.7889908256881, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI71989583, Length=292, Percent_Identity=25.6849315068493, Blast_Score=89, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320922, Length=444, Percent_Identity=25.6756756756757, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6321118, Length=298, Percent_Identity=29.5302013422819, Blast_Score=121, Evalue=2e-28, Organism=Drosophila melanogaster, GI21357079, Length=503, Percent_Identity=27.8330019880716, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI19920384, Length=489, Percent_Identity=27.6073619631902, Blast_Score=156, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 57985; Mature: 57985
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPKISFGVILLAGIAFAADSTPWKVAPAPPASWQRDRVADLTARRKAVMDQIGDHAIL CCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE MLFAAEPRNYANDVDWPFRQENDFFYLTGLTQPGATLMLIPSAGKMREIVFLPRANPAQE EEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCC TWTGHMLTHAEAREISGIQDVFDASQVNGLLSALVPRARAVLTELPATGGRGGRGGRGGA CCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DAGVPLDVPVWSLEIAKPIEYAAKEELQLYMILPARPNAVECRREQEFAGKLASVGAGLT CCCCCCCCCEEEEECCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEE IKDASTIFNTLRRVKSQREIDLLQHAVDITAEAFQRAYAFAVPGTPEYEIQAQFEFTFLR ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEEEE RNAHWGYPCIVGSGVNATTLHYETNKDTMKDGDLLLMDDAAEFDQYSVDVTRTVPVNGKF ECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCC SSEQADIYRLVWAAQQAGFSAAKPGHAASDIQGAANEVFKQGLFKLGLITDAKSDAQMKI CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEE WFNHGISHGIGLNVHDPGGKELQPGMVVTVEPGLYFRPDALENLPKTPEMEKFREAVRPA EEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCEECCHHHHCCCCCCCHHHHHHHHHHH FEKYKGIGVRLEDDVLITNAEPRVMSAAVPSKLEEVEASIAKLRQTAKN HHHHCCCCEEEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIPKISFGVILLAGIAFAADSTPWKVAPAPPASWQRDRVADLTARRKAVMDQIGDHAIL CCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE MLFAAEPRNYANDVDWPFRQENDFFYLTGLTQPGATLMLIPSAGKMREIVFLPRANPAQE EEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCC TWTGHMLTHAEAREISGIQDVFDASQVNGLLSALVPRARAVLTELPATGGRGGRGGRGGA CCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DAGVPLDVPVWSLEIAKPIEYAAKEELQLYMILPARPNAVECRREQEFAGKLASVGAGLT CCCCCCCCCEEEEECCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEE IKDASTIFNTLRRVKSQREIDLLQHAVDITAEAFQRAYAFAVPGTPEYEIQAQFEFTFLR ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEEEE RNAHWGYPCIVGSGVNATTLHYETNKDTMKDGDLLLMDDAAEFDQYSVDVTRTVPVNGKF ECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCC SSEQADIYRLVWAAQQAGFSAAKPGHAASDIQGAANEVFKQGLFKLGLITDAKSDAQMKI CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEE WFNHGISHGIGLNVHDPGGKELQPGMVVTVEPGLYFRPDALENLPKTPEMEKFREAVRPA EEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCEECCHHHHCCCCCCCHHHHHHHHHHH FEKYKGIGVRLEDDVLITNAEPRVMSAAVPSKLEEVEASIAKLRQTAKN HHHHCCCCEEEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2659585; 1339425; 9278503; 9520390 [H]