| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625512
Identifier: 116625512
GI number: 116625512
Start: 8095507
End: 8096397
Strand: Direct
Name: 116625512
Synonym: Acid_6459
Alternate gene names: NA
Gene position: 8095507-8096397 (Clockwise)
Preceding gene: 116625511
Following gene: 116625513
Centisome position: 81.23
GC content: 65.77
Gene sequence:
>891_bases ATGGCGGACATCGTGATCGTGCTCTTCTCGCGCGAATCGATGCCTTCGCGCTGGGCACGCGCGCAGTGGGAAGGCGCGCT GGTCACGGAGCCGGCCGAGGAAGGCGTGCGGATCGCATTCCTCAAGTGCGACGATTGTATTCCGCCGCGCGTGCTGACGC CGATGTTCGAGGCCACGCGGCTGCGCGACGTGAAGCGCTGGGTGCGCGGCAGCACCGCAAGCGAGCCGGCATCCACGGAA TTCTCCGCCGATCTCGAAGTGCTCGGCATCGCGATCGCCGATCGTCCGGGAGTGGAGACGGTGGAGCACATCGCGCTGGC ACGGGAATTCGTCCGATGCTTCCGCGGCGATTTCGACGCCGTGCTGCACGTGGATTGCGTCACTGGAACGCTGGCCGATA TGTCCGGCGACCTCGCCAACCAACTCGGGCTGCACCTGGAAGGCGAACTGGCCGACAACATCGATCACCTGCGCGTGTTT TGCGAGGTGCGGCGGTTGCTGATCGTGCTCGAAGGCGGGGCGCCGTATGAGCTGACTTTCGGCGGTCGCTGCTCCACGCT GATTTCGACGGAGGCGGGCGAGCCCTCGCCCGACGAGCTGCGAACCCTCGCGCGCGCATTTGACGCGACCGACGATTGGA GCGAGCTGTGCAGGCTGGCGCGGATGGTGCGACGGATCGGCCGCGAGCAGTTCCGGCTGGCCGAATGCTACGAGATCATG AAGCAGTGGCGCACGATGGCGGACGAGAACGACGACCGTCCGGCGGTGGACGAGGCCAGCCGCGAGATCGTGTGGATTCT GGATGGCTGGGGCCGCACGGACGAGGCGCGGCAGATCGAACAGTTGCGTGCGCAGGAATTCGACGAGCAACTGCCGTTGT TCTTTGAGTAA
Upstream 100 bases:
>100_bases GGCAGCCCTGCTGGAACGCGGCGCGGACGTGCGCATTTTCCTGGATGAAGGCGAGTTGAAGCCAGGTGGCGACCTGGCTG AGAAGGCGCGCGAGGGTCGC
Downstream 100 bases:
>100_bases AGCGTCATGAATATCGACGATTATCTGATCGATCAGTCGGGCCGGGACTGGGTGGCGATGCTTTCAGGCTGGTCGGAACT CTTGCCGACGTCTTTGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MADIVIVLFSRESMPSRWARAQWEGALVTEPAEEGVRIAFLKCDDCIPPRVLTPMFEATRLRDVKRWVRGSTASEPASTE FSADLEVLGIAIADRPGVETVEHIALAREFVRCFRGDFDAVLHVDCVTGTLADMSGDLANQLGLHLEGELADNIDHLRVF CEVRRLLIVLEGGAPYELTFGGRCSTLISTEAGEPSPDELRTLARAFDATDDWSELCRLARMVRRIGREQFRLAECYEIM KQWRTMADENDDRPAVDEASREIVWILDGWGRTDEARQIEQLRAQEFDEQLPLFFE
Sequences:
>Translated_296_residues MADIVIVLFSRESMPSRWARAQWEGALVTEPAEEGVRIAFLKCDDCIPPRVLTPMFEATRLRDVKRWVRGSTASEPASTE FSADLEVLGIAIADRPGVETVEHIALAREFVRCFRGDFDAVLHVDCVTGTLADMSGDLANQLGLHLEGELADNIDHLRVF CEVRRLLIVLEGGAPYELTFGGRCSTLISTEAGEPSPDELRTLARAFDATDDWSELCRLARMVRRIGREQFRLAECYEIM KQWRTMADENDDRPAVDEASREIVWILDGWGRTDEARQIEQLRAQEFDEQLPLFFE >Mature_295_residues ADIVIVLFSRESMPSRWARAQWEGALVTEPAEEGVRIAFLKCDDCIPPRVLTPMFEATRLRDVKRWVRGSTASEPASTEF SADLEVLGIAIADRPGVETVEHIALAREFVRCFRGDFDAVLHVDCVTGTLADMSGDLANQLGLHLEGELADNIDHLRVFC EVRRLLIVLEGGAPYELTFGGRCSTLISTEAGEPSPDELRTLARAFDATDDWSELCRLARMVRRIGREQFRLAECYEIMK QWRTMADENDDRPAVDEASREIVWILDGWGRTDEARQIEQLRAQEFDEQLPLFFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33536; Mature: 33405
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIVIVLFSRESMPSRWARAQWEGALVTEPAEEGVRIAFLKCDDCIPPRVLTPMFEATR CCCEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHH LRDVKRWVRGSTASEPASTEFSADLEVLGIAIADRPGVETVEHIALAREFVRCFRGDFDA HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC VLHVDCVTGTLADMSGDLANQLGLHLEGELADNIDHLRVFCEVRRLLIVLEGGAPYELTF EEEEHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEE GGRCSTLISTEAGEPSPDELRTLARAFDATDDWSELCRLARMVRRIGREQFRLAECYEIM CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH KQWRTMADENDDRPAVDEASREIVWILDGWGRTDEARQIEQLRAQEFDEQLPLFFE HHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADIVIVLFSRESMPSRWARAQWEGALVTEPAEEGVRIAFLKCDDCIPPRVLTPMFEATR CCEEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHH LRDVKRWVRGSTASEPASTEFSADLEVLGIAIADRPGVETVEHIALAREFVRCFRGDFDA HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC VLHVDCVTGTLADMSGDLANQLGLHLEGELADNIDHLRVFCEVRRLLIVLEGGAPYELTF EEEEHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEE GGRCSTLISTEAGEPSPDELRTLARAFDATDDWSELCRLARMVRRIGREQFRLAECYEIM CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH KQWRTMADENDDRPAVDEASREIVWILDGWGRTDEARQIEQLRAQEFDEQLPLFFE HHHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA