| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625503
Identifier: 116625503
GI number: 116625503
Start: 8085127
End: 8086206
Strand: Direct
Name: 116625503
Synonym: Acid_6450
Alternate gene names: NA
Gene position: 8085127-8086206 (Clockwise)
Preceding gene: 116625502
Following gene: 116625504
Centisome position: 81.13
GC content: 65.46
Gene sequence:
>1080_bases ATGGTAGCGGCGGCGACGTGGCGCGCGCGGTCCCGCGGCGGTGCGGTATCCGGGGCGGCGCCGCCGCTCTCCATTCTCAA ACCGGTGCACGGACGCGATCCGCAGTTTTACAAGGCGATCCTTTCTCACGCTACGCAAGAGTATCCTGAGTTCGAGATTC TCTTCGGCACAAATAATGTCGAAGATCCGGCGCTGCCTGATATTCGCCGGCTGCAGAAGGAATTTCCGAATCGCCGCATC GAAATCGTGATTGCGAACAACGATGCGCCGAACGCGAAGGTGGGCGTGCTGGAGGAGCTGGCGAAGCTTGCGCGGTTTCC GGTGCTGCTGGTGAACGATAGCGACATCGTGGTGGAGCCCGGCTATCTTCACGCGGTGACGGCGCCTCTGGCCAATCCGG GAGTTGGGCTGGTGACCTGCCTTTATCGCGCGGCTGCGCAATCCTGGCCGGCGCGCTCGGAGGCGCTGGGAATTGCGACC GAGTTTGCGCCGAGCGTGATGGTGGCGCGGCTGCTCGGCGTGGCCGATTTCGCGCTTGGCTCCACGATGGTGTTTCGGAC GGAAGCGCTGGAGAGGATCGGAGGGTTCCGGGCGATCGCGAACTACCTGGCGGACGATTACCAGTTGGGGCGGCACATCG CCCAGCTGGGCTACCGGATCGAATTCGCGCCTGTGGTGGTGGAGACGGACCTGGGCGGCGGATCGTGGGGGCAGATCTGG CGGCATCAACTGCGCTGGTCGCGCACGATCCGGGTATCGCGCTCCGCCGGCTACTACGGCTATGTGGTGACGCATGCCAC TCTGTGGTCTCTGGTCGCGCTGGCGGCGGGCCAGTGGCAGGCTGCGGCCGCGGTACTTGCGGTGCGGGTGGCCGCGGGCG TGTGGATCGGAGCCGGGATATTAGGCGACGCCAAGGTACTCCGCGATTTCTGGATGATCCCGCTACGCGATCTTTTCGGG TTCGCGATCTGGGCCGGCGGACTCTCCGGGGACACGGTGCAGTGGCGCGATCGCCGGCTAAAGCTCCGCCCCGATGGCCG CATATTGGATGAGCCGCAGGCAGCGCCCACCCCCCATTGA
Upstream 100 bases:
>100_bases GGGCGGGCGCATTGCTGGTGATCGGCGGCGTCGTGCTGGTTTCCACGTGATCTGGCTGGCCATACCGGCGTTTGCGGCAG CGGCATACTACTGCCTCGCG
Downstream 100 bases:
>100_bases CGCCGGTGCTGGCAATCGCTAGGGTGAGTTCAGACACGGTGGTCTGGTTTTTATTTACCGCCTTTATCTTTTTCTGTGGC CGGGCCGCACGGGTCAATGG
Product: glycosyl transferase family protein
Products: UDP; D-glucosyl-N-acylsphingosine
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyltransferase Family; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MVAAATWRARSRGGAVSGAAPPLSILKPVHGRDPQFYKAILSHATQEYPEFEILFGTNNVEDPALPDIRRLQKEFPNRRI EIVIANNDAPNAKVGVLEELAKLARFPVLLVNDSDIVVEPGYLHAVTAPLANPGVGLVTCLYRAAAQSWPARSEALGIAT EFAPSVMVARLLGVADFALGSTMVFRTEALERIGGFRAIANYLADDYQLGRHIAQLGYRIEFAPVVVETDLGGGSWGQIW RHQLRWSRTIRVSRSAGYYGYVVTHATLWSLVALAAGQWQAAAAVLAVRVAAGVWIGAGILGDAKVLRDFWMIPLRDLFG FAIWAGGLSGDTVQWRDRRLKLRPDGRILDEPQAAPTPH
Sequences:
>Translated_359_residues MVAAATWRARSRGGAVSGAAPPLSILKPVHGRDPQFYKAILSHATQEYPEFEILFGTNNVEDPALPDIRRLQKEFPNRRI EIVIANNDAPNAKVGVLEELAKLARFPVLLVNDSDIVVEPGYLHAVTAPLANPGVGLVTCLYRAAAQSWPARSEALGIAT EFAPSVMVARLLGVADFALGSTMVFRTEALERIGGFRAIANYLADDYQLGRHIAQLGYRIEFAPVVVETDLGGGSWGQIW RHQLRWSRTIRVSRSAGYYGYVVTHATLWSLVALAAGQWQAAAAVLAVRVAAGVWIGAGILGDAKVLRDFWMIPLRDLFG FAIWAGGLSGDTVQWRDRRLKLRPDGRILDEPQAAPTPH >Mature_359_residues MVAAATWRARSRGGAVSGAAPPLSILKPVHGRDPQFYKAILSHATQEYPEFEILFGTNNVEDPALPDIRRLQKEFPNRRI EIVIANNDAPNAKVGVLEELAKLARFPVLLVNDSDIVVEPGYLHAVTAPLANPGVGLVTCLYRAAAQSWPARSEALGIAT EFAPSVMVARLLGVADFALGSTMVFRTEALERIGGFRAIANYLADDYQLGRHIAQLGYRIEFAPVVVETDLGGGSWGQIW RHQLRWSRTIRVSRSAGYYGYVVTHATLWSLVALAAGQWQAAAAVLAVRVAAGVWIGAGILGDAKVLRDFWMIPLRDLFG FAIWAGGLSGDTVQWRDRRLKLRPDGRILDEPQAAPTPH
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=353, Percent_Identity=24.6458923512748, Blast_Score=93, Evalue=4e-19, Organism=Caenorhabditis elegans, GI32566973, Length=202, Percent_Identity=30.1980198019802, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI32564728, Length=207, Percent_Identity=28.0193236714976, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI25149574, Length=207, Percent_Identity=28.0193236714976, Blast_Score=88, Evalue=8e-18, Organism=Caenorhabditis elegans, GI25149577, Length=207, Percent_Identity=28.0193236714976, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI25149580, Length=207, Percent_Identity=28.0193236714976, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25147526, Length=204, Percent_Identity=25.4901960784314, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24657569, Length=234, Percent_Identity=23.5042735042735, Blast_Score=86, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.80
Molecular weight: Translated: 39175; Mature: 39175
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAAATWRARSRGGAVSGAAPPLSILKPVHGRDPQFYKAILSHATQEYPEFEILFGTNNV CCCCCCCCHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC EDPALPDIRRLQKEFPNRRIEIVIANNDAPNAKVGVLEELAKLARFPVLLVNDSDIVVEP CCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCEEEEC GYLHAVTAPLANPGVGLVTCLYRAAAQSWPARSEALGIATEFAPSVMVARLLGVADFALG CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC STMVFRTEALERIGGFRAIANYLADDYQLGRHIAQLGYRIEFAPVVVETDLGGGSWGQIW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCHHHHH RHQLRWSRTIRVSRSAGYYGYVVTHATLWSLVALAAGQWQAAAAVLAVRVAAGVWIGAGI HHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC LGDAKVLRDFWMIPLRDLFGFAIWAGGLSGDTVQWRDRRLKLRPDGRILDEPQAAPTPH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MVAAATWRARSRGGAVSGAAPPLSILKPVHGRDPQFYKAILSHATQEYPEFEILFGTNNV CCCCCCCCHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC EDPALPDIRRLQKEFPNRRIEIVIANNDAPNAKVGVLEELAKLARFPVLLVNDSDIVVEP CCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCEEEEC GYLHAVTAPLANPGVGLVTCLYRAAAQSWPARSEALGIATEFAPSVMVARLLGVADFALG CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC STMVFRTEALERIGGFRAIANYLADDYQLGRHIAQLGYRIEFAPVVVETDLGGGSWGQIW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCHHHHH RHQLRWSRTIRVSRSAGYYGYVVTHATLWSLVALAAGQWQAAAAVLAVRVAAGVWIGAGI HHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC LGDAKVLRDFWMIPLRDLFGFAIWAGGLSGDTVQWRDRRLKLRPDGRILDEPQAAPTPH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; N-acylsphingosine
Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA