Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116625295

Identifier: 116625295

GI number: 116625295

Start: 7822143

End: 7822385

Strand: Direct

Name: 116625295

Synonym: Acid_6240

Alternate gene names: NA

Gene position: 7822143-7822385 (Clockwise)

Preceding gene: 116625294

Following gene: 116625304

Centisome position: 78.49

GC content: 60.49

Gene sequence:

>243_bases
ATGTCGGTCGTGGATCGTGAGTTTAGCGAGGAACTCACCGGCCTCATGCCCGCTGTGGCACACAGGCTCGGTGGCGGCGC
TTGCGCCGGGTACATCATCGCCGTCGTTGAGAGCAATACCGTCGAACTGCGGTGCAACCTATGTGGCGAGATCGTAGGCG
TGGTCCAGGTCGGCATCATGGAAGGCTTGCTCGGATTGGACTGCGACGAAGAGCCGTCCCCGCAAGACGAACCTGAAGAT
TAG

Upstream 100 bases:

>100_bases
CGGCTTCTACGCTGCCCGGACTCACCTCCCGCTGACCACCATCCCCCTCCGCTGCTTCGCGGGCTCGAGCAACCTCCAAA
CGCCTGCCGCCGTGTGATAG

Downstream 100 bases:

>100_bases
GCCCGCTCTCAAAAGACGTACAGCCGCAGCATCCACCAAACAAGAAACAGAGCGATGACGGCTACCACCACGTAGCGCAC
CCACTGCGCCGCGGTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSVVDREFSEELTGLMPAVAHRLGGGACAGYIIAVVESNTVELRCNLCGEIVGVVQVGIMEGLLGLDCDEEPSPQDEPED

Sequences:

>Translated_80_residues
MSVVDREFSEELTGLMPAVAHRLGGGACAGYIIAVVESNTVELRCNLCGEIVGVVQVGIMEGLLGLDCDEEPSPQDEPED
>Mature_79_residues
SVVDREFSEELTGLMPAVAHRLGGGACAGYIIAVVESNTVELRCNLCGEIVGVVQVGIMEGLLGLDCDEEPSPQDEPED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8435; Mature: 8303

Theoretical pI: Translated: 3.62; Mature: 3.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVDREFSEELTGLMPAVAHRLGGGACAGYIIAVVESNTVELRCNLCGEIVGVVQVGIM
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHH
EGLLGLDCDEEPSPQDEPED
HHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVVDREFSEELTGLMPAVAHRLGGGACAGYIIAVVESNTVELRCNLCGEIVGVVQVGIM
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHH
EGLLGLDCDEEPSPQDEPED
HHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA