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The map label for this gene is dac [H]

Identifier: 116625280

GI number: 116625280

Start: 7803329

End: 7804189

Strand: Reverse

Name: dac [H]

Synonym: Acid_6225

Alternate gene names: 116625280

Gene position: 7804189-7803329 (Counterclockwise)

Preceding gene: 116625296

Following gene: 116625279

Centisome position: 78.31

GC content: 64.46

Gene sequence:

>861_bases
ATGAGAGGACTGATACTGATGTTGGCCGGCGTGACTTCCCTGCTCGCCCAGGGCGAGAAGATTCGTGTGATCGCGTTTGG
CGCGCATCCCGACGATTGCGACATTCGCGCGTCGGGGACGGCGGCGCTAATGGCCGCCGCGGGCCACGCGGTGAAATTCG
TCTCGGTGACCAACGGCGACGTGGGGCACCAGACGCTGCATGGTGCGCCTCTGGCGGAGCGCAGGCTGGCGGAGGCCCGG
GAATCGGCGCGGCGGCTGGGGATTGAGTATGAAGTGCTCGGCAATCACGATGGAGAGCTGCTGCCGACCCTCGAAGTGCG
CAAACAGGTGATCCGTCAGATCCGCGAGTGGAATGCGGACGTGGTGCTGGCGCCGAGGCCGAACGACTATCATCCGGACC
ACCGGTACACGGGCGTCCTGGTGCAGGACGCGGCGTATATGGTGGTGGTGCCGCACATGCTGCCGGAGGCGCCGGCACTG
CGCAAGAATCCGGTCTTCCTCTATTATGAGGACGGCTTCCAGCGGCCGAATCCGTTTCGGCCGGATATTGCGGTGGCGAT
CGACGACGTAATCGATAAGAAGATCGCCGCGCTGGATTCGCACGTGTCGCAGTTTTACGAGTGGCTGCCGTGGGTGGCGG
GGACGCTGGCGGAAGTCCCGCAGGATCCGGCGGAGCGTAAGGCTTGGCTGAAGCGCAGCAGAACGCGCGACATCAGCCCC
GCGGTGCGGGCATCCCTGGTGAAATGGTATGGGCCGGCGAAGGGCAATGCGGCGCGGTACTACGAGGCCTTCGAGGTCTG
CGAATACGGGACGCAGCCTAGCGAGGCGCGTATTCGCCAGCTATTTCCGATGTTGCGATGA

Upstream 100 bases:

>100_bases
CCCGGCTAAAACGACACCCTTCATAGGCGTTAATTATACCGTACCGACGCAATCGGCCTGGCACGCGAGCATAATGAAAA
CTCCGGGAGGAAATCGAGAC

Downstream 100 bases:

>100_bases
TGCCGATGTTACACTGATTCTGAATGCCTTACAGCCAGATCCTGTTCGACGTGTCCGAGGCCGGGGTTGCGCTGATCACG
ATCAATCGTCCGGAGAAGCT

Product: LmbE family protein

Products: NA

Alternate protein names: N-acetylchitobiose deacetylase; Tk-Dac [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRGLILMLAGVTSLLAQGEKIRVIAFGAHPDDCDIRASGTAALMAAAGHAVKFVSVTNGDVGHQTLHGAPLAERRLAEAR
ESARRLGIEYEVLGNHDGELLPTLEVRKQVIRQIREWNADVVLAPRPNDYHPDHRYTGVLVQDAAYMVVVPHMLPEAPAL
RKNPVFLYYEDGFQRPNPFRPDIAVAIDDVIDKKIAALDSHVSQFYEWLPWVAGTLAEVPQDPAERKAWLKRSRTRDISP
AVRASLVKWYGPAKGNAARYYEAFEVCEYGTQPSEARIRQLFPMLR

Sequences:

>Translated_286_residues
MRGLILMLAGVTSLLAQGEKIRVIAFGAHPDDCDIRASGTAALMAAAGHAVKFVSVTNGDVGHQTLHGAPLAERRLAEAR
ESARRLGIEYEVLGNHDGELLPTLEVRKQVIRQIREWNADVVLAPRPNDYHPDHRYTGVLVQDAAYMVVVPHMLPEAPAL
RKNPVFLYYEDGFQRPNPFRPDIAVAIDDVIDKKIAALDSHVSQFYEWLPWVAGTLAEVPQDPAERKAWLKRSRTRDISP
AVRASLVKWYGPAKGNAARYYEAFEVCEYGTQPSEARIRQLFPMLR
>Mature_286_residues
MRGLILMLAGVTSLLAQGEKIRVIAFGAHPDDCDIRASGTAALMAAAGHAVKFVSVTNGDVGHQTLHGAPLAERRLAEAR
ESARRLGIEYEVLGNHDGELLPTLEVRKQVIRQIREWNADVVLAPRPNDYHPDHRYTGVLVQDAAYMVVVPHMLPEAPAL
RKNPVFLYYEDGFQRPNPFRPDIAVAIDDVIDKKIAALDSHVSQFYEWLPWVAGTLAEVPQDPAERKAWLKRSRTRDISP
AVRASLVKWYGPAKGNAARYYEAFEVCEYGTQPSEARIRQLFPMLR

Specific function: Deacylates the non-reducing end of diacetylchitobiose (GlcNAc2). Can also use N-acetylglucosamine (GlcNAc) and N- acetylchitotriose (GlcNAc3). Probably involved in chitin degradation [H]

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 31968; Mature: 31968

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLILMLAGVTSLLAQGEKIRVIAFGAHPDDCDIRASGTAALMAAAGHAVKFVSVTNGD
CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCHHHHHHHCCCEEEEEEECCCC
VGHQTLHGAPLAERRLAEARESARRLGIEYEVLGNHDGELLPTLEVRKQVIRQIREWNAD
CCCHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCC
VVLAPRPNDYHPDHRYTGVLVQDAAYMVVVPHMLPEAPALRKNPVFLYYEDGFQRPNPFR
EEEECCCCCCCCCCCEEEEEEECCEEEEEECHHCCCCCCCCCCCEEEEECCCCCCCCCCC
PDIAVAIDDVIDKKIAALDSHVSQFYEWLPWVAGTLAEVPQDPAERKAWLKRSRTRDISP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
AVRASLVKWYGPAKGNAARYYEAFEVCEYGTQPSEARIRQLFPMLR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRGLILMLAGVTSLLAQGEKIRVIAFGAHPDDCDIRASGTAALMAAAGHAVKFVSVTNGD
CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECCCHHHHHHHCCCEEEEEEECCCC
VGHQTLHGAPLAERRLAEARESARRLGIEYEVLGNHDGELLPTLEVRKQVIRQIREWNAD
CCCHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCC
VVLAPRPNDYHPDHRYTGVLVQDAAYMVVVPHMLPEAPALRKNPVFLYYEDGFQRPNPFR
EEEECCCCCCCCCCCEEEEEEECCEEEEEECHHCCCCCCCCCCCEEEEECCCCCCCCCCC
PDIAVAIDDVIDKKIAALDSHVSQFYEWLPWVAGTLAEVPQDPAERKAWLKRSRTRDISP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
AVRASLVKWYGPAKGNAARYYEAFEVCEYGTQPSEARIRQLFPMLR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA