| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is crt [H]
Identifier: 116625279
GI number: 116625279
Start: 7802520
End: 7803305
Strand: Reverse
Name: crt [H]
Synonym: Acid_6224
Alternate gene names: 116625279
Gene position: 7803305-7802520 (Counterclockwise)
Preceding gene: 116625280
Following gene: 116625278
Centisome position: 78.3
GC content: 68.83
Gene sequence:
>786_bases ATGCCTTACAGCCAGATCCTGTTCGACGTGTCCGAGGCCGGGGTTGCGCTGATCACGATCAATCGTCCGGAGAAGCTGAA TGCCCTCTCGAGCGCGGTGATCGGCGAACTGGCGCAGGCGTTCGCGCAGGTGGCCGGCGACCCGGGCATTCGCGGCGCGA TTCTGACAGGAGCCGGCGAGAAGGCCTTCGTGGCCGGCGCGGACATCAGTGAACTGGCGTCGCTGACGGCGTATGAAGCG CGCGGATTCGCGCTGCGCGGCCAGGGTGTGTTCCGCGAGCTGGAAACCTGCGGCAAGCCCTCCGTGGCGGCTGTGAATGG CTTCGCCCTGGGCGGCGGCTTGGAACTGGCGATGGCGTGTACGGTGCGCTTCGCGAGCGAGAACGCGAAGCTGGGGCAGC CGGAAGTGAAGCTCGGAATCATCCCGGGCTACGGCGGCACGCAGCGGCTGCCGCGCCTGGTGGGCCGGGGGCGCGCGCTC GAGCTGCTGTTGGCCGGCGACCCGATTCCGGCGGCGGAGGCCTACCGCATCGGCCTGGTGAACGCGGTGACCCCGCAGGC GGAACTGCTGGAGTACAGCCGGGGATGGCTGGCGAAGGTGCTGGCCAACGGTCCACTGGCGCTCGGTCTGGTGATGGACG CGGTGGATACCGGGATGAGCTGCGGGTTGGACGAGGGGCTGCGGCTTGAGGCCGAGGCGTTCGGCGTCAGCGCGGCCACC GAAGACCGCCGCGAAGGAACGCGCGCGTTTCTGGAGAAGCGCCGCGCGGTATTTACAGGAAAGTGA
Upstream 100 bases:
>100_bases AGGCCTTCGAGGTCTGCGAATACGGGACGCAGCCTAGCGAGGCGCGTATTCGCCAGCTATTTCCGATGTTGCGATGATGC CGATGTTACACTGATTCTGA
Downstream 100 bases:
>100_bases GACATGCCGAAAGTATTTGAAGGCCAGTTATCGGCGGCGGGGCTGCGGTTTGCCATCGTGGTCAGCCGCTTCAACAGCTT CATCACGGACCGCCTGCTGG
Product: short chain enoyl-CoA hydratase
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MPYSQILFDVSEAGVALITINRPEKLNALSSAVIGELAQAFAQVAGDPGIRGAILTGAGEKAFVAGADISELASLTAYEA RGFALRGQGVFRELETCGKPSVAAVNGFALGGGLELAMACTVRFASENAKLGQPEVKLGIIPGYGGTQRLPRLVGRGRAL ELLLAGDPIPAAEAYRIGLVNAVTPQAELLEYSRGWLAKVLANGPLALGLVMDAVDTGMSCGLDEGLRLEAEAFGVSAAT EDRREGTRAFLEKRRAVFTGK
Sequences:
>Translated_261_residues MPYSQILFDVSEAGVALITINRPEKLNALSSAVIGELAQAFAQVAGDPGIRGAILTGAGEKAFVAGADISELASLTAYEA RGFALRGQGVFRELETCGKPSVAAVNGFALGGGLELAMACTVRFASENAKLGQPEVKLGIIPGYGGTQRLPRLVGRGRAL ELLLAGDPIPAAEAYRIGLVNAVTPQAELLEYSRGWLAKVLANGPLALGLVMDAVDTGMSCGLDEGLRLEAEAFGVSAAT EDRREGTRAFLEKRRAVFTGK >Mature_260_residues PYSQILFDVSEAGVALITINRPEKLNALSSAVIGELAQAFAQVAGDPGIRGAILTGAGEKAFVAGADISELASLTAYEAR GFALRGQGVFRELETCGKPSVAAVNGFALGGGLELAMACTVRFASENAKLGQPEVKLGIIPGYGGTQRLPRLVGRGRALE LLLAGDPIPAAEAYRIGLVNAVTPQAELLEYSRGWLAKVLANGPLALGLVMDAVDTGMSCGLDEGLRLEAEAFGVSAATE DRREGTRAFLEKRRAVFTGK
Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=247, Percent_Identity=41.7004048582996, Blast_Score=192, Evalue=2e-49, Organism=Homo sapiens, GI20127408, Length=191, Percent_Identity=39.7905759162304, Blast_Score=128, Evalue=6e-30, Organism=Homo sapiens, GI4502327, Length=256, Percent_Identity=35.9375, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI70995211, Length=219, Percent_Identity=30.1369863013699, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI68989263, Length=192, Percent_Identity=37.5, Blast_Score=107, Evalue=8e-24, Organism=Homo sapiens, GI150378541, Length=254, Percent_Identity=29.1338582677165, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI213417737, Length=239, Percent_Identity=27.6150627615063, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI157694516, Length=239, Percent_Identity=27.6150627615063, Blast_Score=98, Evalue=7e-21, Organism=Homo sapiens, GI31542718, Length=250, Percent_Identity=29.2, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI37594471, Length=181, Percent_Identity=32.5966850828729, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI37594469, Length=181, Percent_Identity=32.5966850828729, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI157694520, Length=190, Percent_Identity=29.4736842105263, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI62530384, Length=192, Percent_Identity=28.6458333333333, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI261878539, Length=99, Percent_Identity=43.4343434343434, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI45643119, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI260275230, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI260274832, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI1787659, Length=247, Percent_Identity=42.1052631578947, Blast_Score=168, Evalue=3e-43, Organism=Escherichia coli, GI221142681, Length=248, Percent_Identity=36.6935483870968, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1788597, Length=260, Percent_Identity=35, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1788682, Length=276, Percent_Identity=35.1449275362319, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1790281, Length=204, Percent_Identity=35.7843137254902, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1787660, Length=255, Percent_Identity=36.4705882352941, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI87082183, Length=256, Percent_Identity=30.078125, Blast_Score=101, Evalue=6e-23, Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=42.8, Blast_Score=186, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17554946, Length=252, Percent_Identity=40.4761904761905, Blast_Score=173, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17540714, Length=225, Percent_Identity=34.6666666666667, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17558304, Length=229, Percent_Identity=34.9344978165939, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17534483, Length=252, Percent_Identity=29.7619047619048, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17560910, Length=256, Percent_Identity=31.640625, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI25144276, Length=225, Percent_Identity=37.7777777777778, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17508953, Length=225, Percent_Identity=37.7777777777778, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17508951, Length=225, Percent_Identity=37.7777777777778, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17536985, Length=257, Percent_Identity=26.4591439688716, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17549921, Length=200, Percent_Identity=28.5, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI25144160, Length=194, Percent_Identity=30.9278350515464, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI25144157, Length=194, Percent_Identity=30.9278350515464, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI25141363, Length=171, Percent_Identity=28.6549707602339, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17540306, Length=170, Percent_Identity=30, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=235, Percent_Identity=28.5106382978723, Blast_Score=90, Evalue=3e-19, Organism=Drosophila melanogaster, GI20129971, Length=249, Percent_Identity=44.1767068273092, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI24653477, Length=249, Percent_Identity=44.1767068273092, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI24653139, Length=258, Percent_Identity=36.4341085271318, Blast_Score=157, Evalue=7e-39, Organism=Drosophila melanogaster, GI21357171, Length=189, Percent_Identity=35.978835978836, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI19921000, Length=172, Percent_Identity=43.0232558139535, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24583077, Length=172, Percent_Identity=43.0232558139535, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24583079, Length=172, Percent_Identity=43.0232558139535, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI19920382, Length=253, Percent_Identity=28.8537549407115, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24654903, Length=192, Percent_Identity=30.2083333333333, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24650670, Length=176, Percent_Identity=35.7954545454545, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI19922422, Length=264, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI19921018, Length=205, Percent_Identity=31.7073170731707, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI45550169, Length=200, Percent_Identity=26.5, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI28571729, Length=170, Percent_Identity=30, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI28571730, Length=170, Percent_Identity=30, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24583165, Length=227, Percent_Identity=27.7533039647577, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 27133; Mature: 27001
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYSQILFDVSEAGVALITINRPEKLNALSSAVIGELAQAFAQVAGDPGIRGAILTGAGE CCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC KAFVAGADISELASLTAYEARGFALRGQGVFRELETCGKPSVAAVNGFALGGGLELAMAC EEEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCEEEECCEEECCCHHEEEHE TVRFASENAKLGQPEVKLGIIPGYGGTQRLPRLVGRGRALELLLAGDPIPAAEAYRIGLV EEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHEEEEEE NAVTPQAELLEYSRGWLAKVLANGPLALGLVMDAVDTGMSCGLDEGLRLEAEAFGVSAAT ECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCCC EDRREGTRAFLEKRRAVFTGK HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PYSQILFDVSEAGVALITINRPEKLNALSSAVIGELAQAFAQVAGDPGIRGAILTGAGE CHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC KAFVAGADISELASLTAYEARGFALRGQGVFRELETCGKPSVAAVNGFALGGGLELAMAC EEEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCEEEECCEEECCCHHEEEHE TVRFASENAKLGQPEVKLGIIPGYGGTQRLPRLVGRGRALELLLAGDPIPAAEAYRIGLV EEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHEEEEEE NAVTPQAELLEYSRGWLAKVLANGPLALGLVMDAVDTGMSCGLDEGLRLEAEAFGVSAAT ECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCCC EDRREGTRAFLEKRRAVFTGK HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]