| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625275
Identifier: 116625275
GI number: 116625275
Start: 7798260
End: 7799939
Strand: Direct
Name: 116625275
Synonym: Acid_6220
Alternate gene names: NA
Gene position: 7798260-7799939 (Clockwise)
Preceding gene: 116625274
Following gene: 116625281
Centisome position: 78.25
GC content: 62.26
Gene sequence:
>1680_bases GTGCTTCCTGAAGTGCCCGCAAACAGATCATGGTGGCGGCGGCTCGACGCCGGGATCATCGCCGCGCTGACCTATGCCGC CGTGGTCGCCATCCTGTGGCTCCCGCACAATCCTCACAGCGGAATGGGGTACGAGACGGGCTTTGAGTACACCAGTACCA TCTCCACCTGGTGGAACGGCTTTTTGAACGGCTCCGATCTGCTGCGCATTCACACCAGCACGTTTTATGAAGTCTCCTAT TTGATCGGACGGCGGCTTGGAATCGCCGGCAGCGCGGTTCCTTTTCAAGCCGTCTATGCGGCGCTCTGGTGGGCGCGCGG AGTGCTGGTATTTCTCATTCTGCGGCGCTTCTTTCCCGCCCACGCACTGCTCGCCTACGTGACGGGTCTGCTGGTGCTGG TTCACGCCTCCGACCGGGCGCTGCAATGGGTCGGCCAGTTGAATCAGTTCGGTTTTATTTTCTGGATGCTGCTGGGCTTT TTCGCGCTGGTGGAAGCGGCGCTCGCAGACCGCAACGGTCTTCGCTGGCTGCTCATCGCGGCAGCGTGTTTCTTTGAGCA CATGTCGTTGTGGAGTTACGAGGGGCAATTGCCGCTGCTCGCCGTCCTCCCGTTAACCCTGCTCGCGCTGCCGCACGCAC GAAAGCGGTTGTTGCCCGCCTTGGCCTGGTACGCCGTCCAGGCTCTGTATCTTTCCCTTGCGGCGTTGAGATACCTCCAT CCGGCGGCCAATAACTATCAGGTGTCGGTGCTCCGGAAAGGAGTGAACCTCGCGGCGGTCGCCGCCGACTGGTGGTTCAA CATTCGCGCCAGTCTCGCATTTTGGGATTGGCCGTATGCGCCGGTTGAAGGCTATTCGGCAGTGCTTGCCCCGGCTGCGG CCGCGGCTTTAGCAGTGGGCGGGATCCTGATCTTTCGGTTCCGCGGAAACGAAAAGGTGGGACTCGATACCGTGCGAGGC TGGTGCCTGCTGCTGGCCGCCGGAGTTGGATTCGTGGCACTCAGCCTTTCGGTCTACGTCCTGCTCGATGCCGCGCGCAG CCTTTGGCGCACGCAGATTCTATCCGGCATCGGCGCAAGCCTGGTTTTCGCGAGCCTGTTTGGGCTTATGGGGCACAAGC TGAAATCGGAACGGGACAAGGCCGCGGTCTTGTTAGCAGGCGCGGCAGTGGTCACTTACTTCGGGGCAACCGCGGCGATT CGTCTTGGCGCCTACCATCGCGGTGTCTGGGAACAGCACCGAACTGCTATGGCCGAGATTCTCCGCATTACCCCCCGAGT GAAGCCTTCCACGGTTGTGGTTGTTACCAACGTCCCGAAGGATGCGGATCCCTTCGGCGATGCGATGTGGCTCGACCTTG CCGTGCGGCTTTCCTATCCATCCACGCCGGTGACGGGGGTCTACTACTACTCCGACGGCACGCCGGCCCCGGGCAATTCG CTGCGCGCCTCGCAAGACGGCTGGCAATCGAACGGTTCGGGCTTGACGCCCATGGTCAGCAAAGCACCGGTCGAAAATAC GATCGCAATTCGCTACGATCGCATCGGCCCGGGCACGCTCGAGCCGCGGTTGCCGGAGTTCGTTTGCGCCGGTTGCGCGC CGGGGTCGTACCGCCCGCAGTCCCGAATCACAGGTCCGATCGATCCCTCCGCGCGACGCCGATACCTGGATAGCCAGTGA
Upstream 100 bases:
>100_bases GCAGCGCCACGAATTGCTGCGCTACCTGCGCTGGGCCGAACGCATGAGCAACGGCGGGTAGTGCGGAACCTGCGTTAACA TCGTAGTTCCTACTTTGACA
Downstream 100 bases:
>100_bases CGATACCCGGTGACCGGTGACCTTTAGCGTCCCTGTCCTGCCATGCGCTGAACGATGATCTTCTTCGCGCTCTCCGCCAG CGCCGCGGCCTTGGGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MLPEVPANRSWWRRLDAGIIAALTYAAVVAILWLPHNPHSGMGYETGFEYTSTISTWWNGFLNGSDLLRIHTSTFYEVSY LIGRRLGIAGSAVPFQAVYAALWWARGVLVFLILRRFFPAHALLAYVTGLLVLVHASDRALQWVGQLNQFGFIFWMLLGF FALVEAALADRNGLRWLLIAAACFFEHMSLWSYEGQLPLLAVLPLTLLALPHARKRLLPALAWYAVQALYLSLAALRYLH PAANNYQVSVLRKGVNLAAVAADWWFNIRASLAFWDWPYAPVEGYSAVLAPAAAAALAVGGILIFRFRGNEKVGLDTVRG WCLLLAAGVGFVALSLSVYVLLDAARSLWRTQILSGIGASLVFASLFGLMGHKLKSERDKAAVLLAGAAVVTYFGATAAI RLGAYHRGVWEQHRTAMAEILRITPRVKPSTVVVVTNVPKDADPFGDAMWLDLAVRLSYPSTPVTGVYYYSDGTPAPGNS LRASQDGWQSNGSGLTPMVSKAPVENTIAIRYDRIGPGTLEPRLPEFVCAGCAPGSYRPQSRITGPIDPSARRRYLDSQ
Sequences:
>Translated_559_residues MLPEVPANRSWWRRLDAGIIAALTYAAVVAILWLPHNPHSGMGYETGFEYTSTISTWWNGFLNGSDLLRIHTSTFYEVSY LIGRRLGIAGSAVPFQAVYAALWWARGVLVFLILRRFFPAHALLAYVTGLLVLVHASDRALQWVGQLNQFGFIFWMLLGF FALVEAALADRNGLRWLLIAAACFFEHMSLWSYEGQLPLLAVLPLTLLALPHARKRLLPALAWYAVQALYLSLAALRYLH PAANNYQVSVLRKGVNLAAVAADWWFNIRASLAFWDWPYAPVEGYSAVLAPAAAAALAVGGILIFRFRGNEKVGLDTVRG WCLLLAAGVGFVALSLSVYVLLDAARSLWRTQILSGIGASLVFASLFGLMGHKLKSERDKAAVLLAGAAVVTYFGATAAI RLGAYHRGVWEQHRTAMAEILRITPRVKPSTVVVVTNVPKDADPFGDAMWLDLAVRLSYPSTPVTGVYYYSDGTPAPGNS LRASQDGWQSNGSGLTPMVSKAPVENTIAIRYDRIGPGTLEPRLPEFVCAGCAPGSYRPQSRITGPIDPSARRRYLDSQ >Mature_559_residues MLPEVPANRSWWRRLDAGIIAALTYAAVVAILWLPHNPHSGMGYETGFEYTSTISTWWNGFLNGSDLLRIHTSTFYEVSY LIGRRLGIAGSAVPFQAVYAALWWARGVLVFLILRRFFPAHALLAYVTGLLVLVHASDRALQWVGQLNQFGFIFWMLLGF FALVEAALADRNGLRWLLIAAACFFEHMSLWSYEGQLPLLAVLPLTLLALPHARKRLLPALAWYAVQALYLSLAALRYLH PAANNYQVSVLRKGVNLAAVAADWWFNIRASLAFWDWPYAPVEGYSAVLAPAAAAALAVGGILIFRFRGNEKVGLDTVRG WCLLLAAGVGFVALSLSVYVLLDAARSLWRTQILSGIGASLVFASLFGLMGHKLKSERDKAAVLLAGAAVVTYFGATAAI RLGAYHRGVWEQHRTAMAEILRITPRVKPSTVVVVTNVPKDADPFGDAMWLDLAVRLSYPSTPVTGVYYYSDGTPAPGNS LRASQDGWQSNGSGLTPMVSKAPVENTIAIRYDRIGPGTLEPRLPEFVCAGCAPGSYRPQSRITGPIDPSARRRYLDSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61267; Mature: 61267
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPEVPANRSWWRRLDAGIIAALTYAAVVAILWLPHNPHSGMGYETGFEYTSTISTWWNG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC FLNGSDLLRIHTSTFYEVSYLIGRRLGIAGSAVPFQAVYAALWWARGVLVFLILRRFFPA CCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HALLAYVTGLLVLVHASDRALQWVGQLNQFGFIFWMLLGFFALVEAALADRNGLRWLLIA HHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AACFFEHMSLWSYEGQLPLLAVLPLTLLALPHARKRLLPALAWYAVQALYLSLAALRYLH HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAANNYQVSVLRKGVNLAAVAADWWFNIRASLAFWDWPYAPVEGYSAVLAPAAAAALAVG CCCCCEEEEEECCCCCEEEEEEHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC GILIFRFRGNEKVGLDTVRGWCLLLAAGVGFVALSLSVYVLLDAARSLWRTQILSGIGAS CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LVFASLFGLMGHKLKSERDKAAVLLAGAAVVTYFGATAAIRLGAYHRGVWEQHRTAMAEI HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRITPRVKPSTVVVVTNVPKDADPFGDAMWLDLAVRLSYPSTPVTGVYYYSDGTPAPGNS HHHCCCCCCCEEEEEECCCCCCCCCCCHHEEEEEEEECCCCCCCEEEEEECCCCCCCCCC LRASQDGWQSNGSGLTPMVSKAPVENTIAIRYDRIGPGTLEPRLPEFVCAGCAPGSYRPQ CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCC SRITGPIDPSARRRYLDSQ CCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MLPEVPANRSWWRRLDAGIIAALTYAAVVAILWLPHNPHSGMGYETGFEYTSTISTWWNG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC FLNGSDLLRIHTSTFYEVSYLIGRRLGIAGSAVPFQAVYAALWWARGVLVFLILRRFFPA CCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HALLAYVTGLLVLVHASDRALQWVGQLNQFGFIFWMLLGFFALVEAALADRNGLRWLLIA HHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AACFFEHMSLWSYEGQLPLLAVLPLTLLALPHARKRLLPALAWYAVQALYLSLAALRYLH HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAANNYQVSVLRKGVNLAAVAADWWFNIRASLAFWDWPYAPVEGYSAVLAPAAAAALAVG CCCCCEEEEEECCCCCEEEEEEHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC GILIFRFRGNEKVGLDTVRGWCLLLAAGVGFVALSLSVYVLLDAARSLWRTQILSGIGAS CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LVFASLFGLMGHKLKSERDKAAVLLAGAAVVTYFGATAAIRLGAYHRGVWEQHRTAMAEI HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRITPRVKPSTVVVVTNVPKDADPFGDAMWLDLAVRLSYPSTPVTGVYYYSDGTPAPGNS HHHCCCCCCCEEEEEECCCCCCCCCCCHHEEEEEEEECCCCCCCEEEEEECCCCCCCCCC LRASQDGWQSNGSGLTPMVSKAPVENTIAIRYDRIGPGTLEPRLPEFVCAGCAPGSYRPQ CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCC SRITGPIDPSARRRYLDSQ CCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA