| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yhjL [C]
Identifier: 116625191
GI number: 116625191
Start: 7671411
End: 7672835
Strand: Reverse
Name: yhjL [C]
Synonym: Acid_6136
Alternate gene names: 116625191
Gene position: 7672835-7671411 (Counterclockwise)
Preceding gene: 116625192
Following gene: 116625190
Centisome position: 76.99
GC content: 62.53
Gene sequence:
>1425_bases TTGAGGCCCCGACTGAAGCAAGGCTTCGCCCTGCTTCTTCTTTTCTGCCTCTCCGCGCTGGCGGCCGCGCAGAGTGACGA TCTGGCGTTGAAATCGCACCGCGCCAAAGCACTGATGGCGGAGGGGCGATTCTCGGAAGCGGTTCCCTTGTACGAACAAC TGGTGCGCGCCGTCCCCGATAACCCGGGACTGATCTTGAATCTCGGGTTGGCCGAGCGCATGGCGGGGCAGTTCCGCAAG TCGATTCCTCATTTCGAAGCCGTACTGAAGAAAGACCCGGGGAATCTTCCGGCGTGCTTGTCGCTGGGTGTGGTCCATCT GAAACTAGGCGAACCGGGGTTGGCGGTAGCGCCCCTGGAAAGAGCGGCAGCCGCCGCCGCCGGTGATGCGGAGCCGCGCG GCTTACTGGCACAGGCACTGCTTGAGGCCGGACGCCCCAAAGAAGCGGCGCTCCATTTTCGCAAGCTCACCGGGCTTACC CCCGGCGATGCCAGAGCCTGGTATGGGCTCGGGAAGAGTTACGAATCCGTCTCCAACAACGCCTTCGAGCAGCTGCGCAA ATCCGAGCCGGAATCGTGCTGGATGCTGGCTCTGCTGGCCGATTCCCGTGTGACGCGGAAGCAGTATCGCAGCGCGTTTT ACTTGTACCGTCAGGCGCTGGAGAGAAATCCGGCGATGGGCGGCGTCCACACAGCCGTCGCCGAGGTATATCGTCGCACG GGCCATCCGGATTGGGCAGCGGACGAACAAAGCAGGGAGCCCGCGAAACCAGCGGCACTGAACGCGGCGTATCGCGAAGC GAAAGAAAATAGTCAATTGGCGCTCGAAGCCTTCTCTCACCTCTCGTCGCTGCCGGAATCCGTCGAGTATCATCAACTGC GCGCCGAAACAATGAGCGCGCAGGGCCAGCACCTCGATGCCGCCAAAGAATGGCGAGCCGCTTTAGCGATGCAACCGGGT AACGCGGCATTCGAGAAGGAAGTCGCCGTGTCGCTCTATATGGGGCGAGACTACAACTCCGCGGCGCCGCTAATTCTCCG GTTCCGGCCCCTCACTCCGGAGCTGAATTACATGGAAGGCGATTCGCTGCTCCACCTCGAAGAGGCCGAGCGGGCGATTC CGTATCTGGAAGCCGCGGTTCGCGCCGATCCGAAAATGACGGCCGCCCACGCGTCGCTCGGCTTGGCTTATGCCAGGGCT GGCCAGCCGGCTAAGGCAGTCTCCCACCTGGAAGCCGCCTCATCGCTGGATGATGACGGCAGTCTCACCTACCAGCTGTC GCGCGCGTACCAGGCCACCGGCCAGCCGGAACGCGCCCGGCAGGCACTGAAGCAGTATGAGGAGATGGTGAAGAAGGTGC AGGCCCAGAAAGATGAGCTATCGAAAGAGGCACAGATCACTGCGCCGCCGGATGGACGGCAGTAA
Upstream 100 bases:
>100_bases CATGCAAATCCTCAGCGCTTCCGGCGAACGCCAGATCCGCTTTGGTCTGCGTGCAGCCTGGTAACCATGCGGCTACAATT CTAAGGTGCGGTTTTCGCGA
Downstream 100 bases:
>100_bases GCTGCTCGCAGCCGCGCTGCGCCTCTGGCTGCTATCGATCTCGGCCGGGCTGGTGGCGGCGGAAGCTCCGGCCCCGATCC TGTTCCGGAACGTGGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MRPRLKQGFALLLLFCLSALAAAQSDDLALKSHRAKALMAEGRFSEAVPLYEQLVRAVPDNPGLILNLGLAERMAGQFRK SIPHFEAVLKKDPGNLPACLSLGVVHLKLGEPGLAVAPLERAAAAAAGDAEPRGLLAQALLEAGRPKEAALHFRKLTGLT PGDARAWYGLGKSYESVSNNAFEQLRKSEPESCWMLALLADSRVTRKQYRSAFYLYRQALERNPAMGGVHTAVAEVYRRT GHPDWAADEQSREPAKPAALNAAYREAKENSQLALEAFSHLSSLPESVEYHQLRAETMSAQGQHLDAAKEWRAALAMQPG NAAFEKEVAVSLYMGRDYNSAAPLILRFRPLTPELNYMEGDSLLHLEEAERAIPYLEAAVRADPKMTAAHASLGLAYARA GQPAKAVSHLEAASSLDDDGSLTYQLSRAYQATGQPERARQALKQYEEMVKKVQAQKDELSKEAQITAPPDGRQ
Sequences:
>Translated_474_residues MRPRLKQGFALLLLFCLSALAAAQSDDLALKSHRAKALMAEGRFSEAVPLYEQLVRAVPDNPGLILNLGLAERMAGQFRK SIPHFEAVLKKDPGNLPACLSLGVVHLKLGEPGLAVAPLERAAAAAAGDAEPRGLLAQALLEAGRPKEAALHFRKLTGLT PGDARAWYGLGKSYESVSNNAFEQLRKSEPESCWMLALLADSRVTRKQYRSAFYLYRQALERNPAMGGVHTAVAEVYRRT GHPDWAADEQSREPAKPAALNAAYREAKENSQLALEAFSHLSSLPESVEYHQLRAETMSAQGQHLDAAKEWRAALAMQPG NAAFEKEVAVSLYMGRDYNSAAPLILRFRPLTPELNYMEGDSLLHLEEAERAIPYLEAAVRADPKMTAAHASLGLAYARA GQPAKAVSHLEAASSLDDDGSLTYQLSRAYQATGQPERARQALKQYEEMVKKVQAQKDELSKEAQITAPPDGRQ >Mature_474_residues MRPRLKQGFALLLLFCLSALAAAQSDDLALKSHRAKALMAEGRFSEAVPLYEQLVRAVPDNPGLILNLGLAERMAGQFRK SIPHFEAVLKKDPGNLPACLSLGVVHLKLGEPGLAVAPLERAAAAAAGDAEPRGLLAQALLEAGRPKEAALHFRKLTGLT PGDARAWYGLGKSYESVSNNAFEQLRKSEPESCWMLALLADSRVTRKQYRSAFYLYRQALERNPAMGGVHTAVAEVYRRT GHPDWAADEQSREPAKPAALNAAYREAKENSQLALEAFSHLSSLPESVEYHQLRAETMSAQGQHLDAAKEWRAALAMQPG NAAFEKEVAVSLYMGRDYNSAAPLILRFRPLTPELNYMEGDSLLHLEEAERAIPYLEAAVRADPKMTAAHASLGLAYARA GQPAKAVSHLEAASSLDDDGSLTYQLSRAYQATGQPERARQALKQYEEMVKKVQAQKDELSKEAQITAPPDGRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51769; Mature: 51769
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: PS00889 CNMP_BINDING_2 ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRLKQGFALLLLFCLSALAAAQSDDLALKSHRAKALMAEGRFSEAVPLYEQLVRAVPD CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC NPGLILNLGLAERMAGQFRKSIPHFEAVLKKDPGNLPACLSLGVVHLKLGEPGLAVAPLE CCCEEEECCHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHCCEEEEEECCCCCEECCHH RAAAAAAGDAEPRGLLAQALLEAGRPKEAALHFRKLTGLTPGDARAWYGLGKSYESVSNN HHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHH AFEQLRKSEPESCWMLALLADSRVTRKQYRSAFYLYRQALERNPAMGGVHTAVAEVYRRT HHHHHHHCCCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GHPDWAADEQSREPAKPAALNAAYREAKENSQLALEAFSHLSSLPESVEYHQLRAETMSA CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHC QGQHLDAAKEWRAALAMQPGNAAFEKEVAVSLYMGRDYNSAAPLILRFRPLTPELNYMEG CCCCCHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCCC DSLLHLEEAERAIPYLEAAVRADPKMTAAHASLGLAYARAGQPAKAVSHLEAASSLDDDG CCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC SLTYQLSRAYQATGQPERARQALKQYEEMVKKVQAQKDELSKEAQITAPPDGRQ CEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure MRPRLKQGFALLLLFCLSALAAAQSDDLALKSHRAKALMAEGRFSEAVPLYEQLVRAVPD CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC NPGLILNLGLAERMAGQFRKSIPHFEAVLKKDPGNLPACLSLGVVHLKLGEPGLAVAPLE CCCEEEECCHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHCCEEEEEECCCCCEECCHH RAAAAAAGDAEPRGLLAQALLEAGRPKEAALHFRKLTGLTPGDARAWYGLGKSYESVSNN HHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHH AFEQLRKSEPESCWMLALLADSRVTRKQYRSAFYLYRQALERNPAMGGVHTAVAEVYRRT HHHHHHHCCCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GHPDWAADEQSREPAKPAALNAAYREAKENSQLALEAFSHLSSLPESVEYHQLRAETMSA CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHC QGQHLDAAKEWRAALAMQPGNAAFEKEVAVSLYMGRDYNSAAPLILRFRPLTPELNYMEG CCCCCHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCCC DSLLHLEEAERAIPYLEAAVRADPKMTAAHASLGLAYARAGQPAKAVSHLEAASSLDDDG CCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC SLTYQLSRAYQATGQPERARQALKQYEEMVKKVQAQKDELSKEAQITAPPDGRQ CEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA