| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625190
Identifier: 116625190
GI number: 116625190
Start: 7669781
End: 7671424
Strand: Reverse
Name: 116625190
Synonym: Acid_6135
Alternate gene names: NA
Gene position: 7671424-7669781 (Counterclockwise)
Preceding gene: 116625191
Following gene: 116625189
Centisome position: 76.98
GC content: 61.8
Gene sequence:
>1644_bases ATGGACGGCAGTAAGCTGCTCGCAGCCGCGCTGCGCCTCTGGCTGCTATCGATCTCGGCCGGGCTGGTGGCGGCGGAAGC TCCGGCCCCGATCCTGTTCCGGAACGTGGCCGAAACCTCGGGTGTTCGCTTCGTGCTCGAAAATGATCCCACGCCGCAGA AGCGGTTGATCGAAACCATGCCCGGGGGCATCGCGATCTTCGACTACAACGGCGACGGTCTTCCCGATCTCTTCTTCACC AACGGCGCCTCCATCCCTTCGCTCCAAAAGGATTCGCCGAAATACTTCAACCGCCTGTACCGCAATGACGGCGGAATGAA ATTTACCGATGTTACCCAACAGGCGCGTCTGGCCGGCGCGGGATACTCGATGGGCGCCGCCGCCGCGGACTATGACAACG ATGGCAACGTGGATCTTTTCGTGGCCGGTGTGAACCGCAATATTCTCTATCGCAATCTGGGCAACGGCCAGTTCCAGGAC GTCACCGAAAAGGCAGGCATCACGAGCGATGGATGGGCCGTGGCCGCCGGCTGGTTCGATTTTGATAACGATGGCAACCT GGACCTGCTGGTGGTTCACTACGCCAGGTGGCCGGCCGACGACCGGTACTGCGGCGATGCCTCGCTCAACCTCCGCATCT ACTGCCACCCGAAATACTTCGACGGCTTGCCCTCGACCCTCTACCGCAACCGAGGTGACGGCACCTTCCAGGATGTCTCG CAGGAATCGGGCATTGCGAAGTATGCCGGCCGCGGCATGAGCGTCGCCTTCGCCGACTATGACGGCGATGGCTTCGTGGA TGCCTTTGTCACCAATGACAACATGCCGAACTTCCTCTTCCACAATCGCGGCAACGGAACCTTCGAAGAGCTGGCGCTGC CCGCCGGCGTGGCGCTGCCCGACCTTGGCCGCGCCGTGGCCAGCATGGGCGCTGATTTCCGCGATTACAATAACGACGGT TTGCCCGACATTGTGGTGACGGCTCTCGCCGGCGAAACCTTCCCGCTGTTTCGCAACGTTGGCAAGGGCGCCTTCACCGA CGCAGGTTACTCCAGCAAGTTGGGACCACTCACCATTCGCCACAGCGGCTGGGGCATCGGCACGTTCGACTTCAACAACG ACGGCTGGAAGGACATTTTCACCGCCGACTCCCACGTCAATGACCTGGTGGAACAGATCGAGGCGGCGCGCTACAAGGAG CCGAACGGCGTCTTCCTAAATCTGGCGAATGGCACCTTCCGCGATGTCTCAGCCGAGGCCGGACAGACGGCCGCCCGCGC CCACCGCGGCAGCGCCTATGCCGATCTCAATGGCGACGGCCGCATCGACGTCGTGGTCTCCTGCCTGGGCGAACCAGCCG AAATTTGGGAGAACCGGAGCCCCGCCGCAAATTGGATCATCGTCAAGCTGGTTGGAGTGCGCAGCAATCGCGACGGCATC GGAGCCCGCATTCGCATCGGCGATCAGTACAATCAGATGACGAGCGCGGTGAGCTACGCTTCCTCCAGCCATGCGGGCGT GCACTTCGGTTTGGGCAAGCTTGCGCTGATCCCGAGAATCGAAATCCGCTGGCCGTCGGGCGTTGTGCAACTGCTGGAAA ACGTGAAGCCGAACCAGGTGCTGACCGTGCGGGAGACTAAATAG
Upstream 100 bases:
>100_bases CGCGCCCGGCAGGCACTGAAGCAGTATGAGGAGATGGTGAAGAAGGTGCAGGCCCAGAAAGATGAGCTATCGAAAGAGGC ACAGATCACTGCGCCGCCGG
Downstream 100 bases:
>100_bases CCAGGCAAAATGGCCCAAATGCCCTCACGGCCGGCGTTTTCGATGGCGTACAATTCTTAGAAATAAGCAATAGAGGACGC TCATGAGGATCCCAATCACT
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat-Containing Protein; FG-GAP Repeat Protein; ASPIC/UnbV; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv; Aspic/Unbv Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; Integrin-Like Protein; Protein Containing FG-GAP Repeats; Secreted Protein Containing FG-GAP Repeats; Fg-Gap; Fg-Gap Repeat Protein; ASPIC And UnbV Domain Protein; Rhs Family Protein; FG-GAP Repeat Domain-Containing Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MDGSKLLAAALRLWLLSISAGLVAAEAPAPILFRNVAETSGVRFVLENDPTPQKRLIETMPGGIAIFDYNGDGLPDLFFT NGASIPSLQKDSPKYFNRLYRNDGGMKFTDVTQQARLAGAGYSMGAAAADYDNDGNVDLFVAGVNRNILYRNLGNGQFQD VTEKAGITSDGWAVAAGWFDFDNDGNLDLLVVHYARWPADDRYCGDASLNLRIYCHPKYFDGLPSTLYRNRGDGTFQDVS QESGIAKYAGRGMSVAFADYDGDGFVDAFVTNDNMPNFLFHNRGNGTFEELALPAGVALPDLGRAVASMGADFRDYNNDG LPDIVVTALAGETFPLFRNVGKGAFTDAGYSSKLGPLTIRHSGWGIGTFDFNNDGWKDIFTADSHVNDLVEQIEAARYKE PNGVFLNLANGTFRDVSAEAGQTAARAHRGSAYADLNGDGRIDVVVSCLGEPAEIWENRSPAANWIIVKLVGVRSNRDGI GARIRIGDQYNQMTSAVSYASSSHAGVHFGLGKLALIPRIEIRWPSGVVQLLENVKPNQVLTVRETK
Sequences:
>Translated_547_residues MDGSKLLAAALRLWLLSISAGLVAAEAPAPILFRNVAETSGVRFVLENDPTPQKRLIETMPGGIAIFDYNGDGLPDLFFT NGASIPSLQKDSPKYFNRLYRNDGGMKFTDVTQQARLAGAGYSMGAAAADYDNDGNVDLFVAGVNRNILYRNLGNGQFQD VTEKAGITSDGWAVAAGWFDFDNDGNLDLLVVHYARWPADDRYCGDASLNLRIYCHPKYFDGLPSTLYRNRGDGTFQDVS QESGIAKYAGRGMSVAFADYDGDGFVDAFVTNDNMPNFLFHNRGNGTFEELALPAGVALPDLGRAVASMGADFRDYNNDG LPDIVVTALAGETFPLFRNVGKGAFTDAGYSSKLGPLTIRHSGWGIGTFDFNNDGWKDIFTADSHVNDLVEQIEAARYKE PNGVFLNLANGTFRDVSAEAGQTAARAHRGSAYADLNGDGRIDVVVSCLGEPAEIWENRSPAANWIIVKLVGVRSNRDGI GARIRIGDQYNQMTSAVSYASSSHAGVHFGLGKLALIPRIEIRWPSGVVQLLENVKPNQVLTVRETK >Mature_547_residues MDGSKLLAAALRLWLLSISAGLVAAEAPAPILFRNVAETSGVRFVLENDPTPQKRLIETMPGGIAIFDYNGDGLPDLFFT NGASIPSLQKDSPKYFNRLYRNDGGMKFTDVTQQARLAGAGYSMGAAAADYDNDGNVDLFVAGVNRNILYRNLGNGQFQD VTEKAGITSDGWAVAAGWFDFDNDGNLDLLVVHYARWPADDRYCGDASLNLRIYCHPKYFDGLPSTLYRNRGDGTFQDVS QESGIAKYAGRGMSVAFADYDGDGFVDAFVTNDNMPNFLFHNRGNGTFEELALPAGVALPDLGRAVASMGADFRDYNNDG LPDIVVTALAGETFPLFRNVGKGAFTDAGYSSKLGPLTIRHSGWGIGTFDFNNDGWKDIFTADSHVNDLVEQIEAARYKE PNGVFLNLANGTFRDVSAEAGQTAARAHRGSAYADLNGDGRIDVVVSCLGEPAEIWENRSPAANWIIVKLVGVRSNRDGI GARIRIGDQYNQMTSAVSYASSSHAGVHFGLGKLALIPRIEIRWPSGVVQLLENVKPNQVLTVRETK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=468, Percent_Identity=25, Blast_Score=84, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59261; Mature: 59261
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGSKLLAAALRLWLLSISAGLVAAEAPAPILFRNVAETSGVRFVLENDPTPQKRLIETM CCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHC PGGIAIFDYNGDGLPDLFFTNGASIPSLQKDSPKYFNRLYRNDGGMKFTDVTQQARLAGA CCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHCCC GYSMGAAAADYDNDGNVDLFVAGVNRNILYRNLGNGQFQDVTEKAGITSDGWAVAAGWFD CCCCCCEECCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEEE FDNDGNLDLLVVHYARWPADDRYCGDASLNLRIYCHPKYFDGLPSTLYRNRGDGTFQDVS CCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCHHHCCCCHHHHCCCCCCCHHHHH QESGIAKYAGRGMSVAFADYDGDGFVDAFVTNDNMPNFLFHNRGNGTFEELALPAGVALP HHCCHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHCCCCCCCH DLGRAVASMGADFRDYNNDGLPDIVVTALAGETFPLFRNVGKGAFTDAGYSSKLGPLTIR HHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEE HSGWGIGTFDFNNDGWKDIFTADSHVNDLVEQIEAARYKEPNGVFLNLANGTFRDVSAEA ECCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC GQTAARAHRGSAYADLNGDGRIDVVVSCLGEPAEIWENRSPAANWIIVKLVGVRSNRDGI CHHHHHHHCCCEEEECCCCCCEEEEEEECCCHHHHHCCCCCCCCEEEEEEEEECCCCCCC GARIRIGDQYNQMTSAVSYASSSHAGVHFGLGKLALIPRIEIRWPSGVVQLLENVKPNQV CEEEEECCHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEEEECCHHHHHHHHCCCCCEE LTVRETK EEEEECC >Mature Secondary Structure MDGSKLLAAALRLWLLSISAGLVAAEAPAPILFRNVAETSGVRFVLENDPTPQKRLIETM CCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHC PGGIAIFDYNGDGLPDLFFTNGASIPSLQKDSPKYFNRLYRNDGGMKFTDVTQQARLAGA CCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHCCC GYSMGAAAADYDNDGNVDLFVAGVNRNILYRNLGNGQFQDVTEKAGITSDGWAVAAGWFD CCCCCCEECCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEEE FDNDGNLDLLVVHYARWPADDRYCGDASLNLRIYCHPKYFDGLPSTLYRNRGDGTFQDVS CCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCHHHCCCCHHHHCCCCCCCHHHHH QESGIAKYAGRGMSVAFADYDGDGFVDAFVTNDNMPNFLFHNRGNGTFEELALPAGVALP HHCCHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHCCCCCCCH DLGRAVASMGADFRDYNNDGLPDIVVTALAGETFPLFRNVGKGAFTDAGYSSKLGPLTIR HHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEE HSGWGIGTFDFNNDGWKDIFTADSHVNDLVEQIEAARYKEPNGVFLNLANGTFRDVSAEA ECCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC GQTAARAHRGSAYADLNGDGRIDVVVSCLGEPAEIWENRSPAANWIIVKLVGVRSNRDGI CHHHHHHHCCCEEEECCCCCCEEEEEEECCCHHHHHCCCCCCCCEEEEEEEEECCCCCCC GARIRIGDQYNQMTSAVSYASSSHAGVHFGLGKLALIPRIEIRWPSGVVQLLENVKPNQV CEEEEECCHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEEEECCHHHHHHHHCCCCCEE LTVRETK EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA