Click here to switch to the map view.

The map label for this gene is ybhG [C]

Identifier: 116625058

GI number: 116625058

Start: 7512750

End: 7513925

Strand: Direct

Name: ybhG [C]

Synonym: Acid_5988

Alternate gene names: 116625058

Gene position: 7512750-7513925 (Clockwise)

Preceding gene: 116625057

Following gene: 116625059

Centisome position: 75.39

GC content: 64.71

Gene sequence:

>1176_bases
ATGAAGAAACGAATTCCGATTCTATTGGCCGCGCTGGCGGTGATCGGGGCCGCGACATATTGGTTTCGCAGCGCGGGGAA
AGCGCCCGACAACCGGCTGGTGATTTCCGGGAACATCGAGCTCGATGAAGTCAATATCGCATTCAAGACGGCGGGGCGGC
TGACCGAGCGCGCGGTGGATGAAGGCGACGGCGTGAAGAAGGGGCAAGTTGTGGCGCGGCTGGATCGCGACCAACTGACG
GCGCAGCGCGAGCGCGAGGCCGCGGGGCTCGCGGCAAGCGAATCGCAGCTGCTGCAGGCGCAGACCGCGGTGGAGCTGCA
GCGCGCGAGCCTGGCAGCCGAGATCGAGACCCGGCAGGCGGATCTCCAATCGATGGAGGCGCGCCTGGCGGAGTTGCGCA
ATGGAGCGCGTCCGCAGGAGAAGCTGGACGCCAGAGCGGCGGTGGACGCGGCGGCGAGCGAGTTGGAGCGCGCCCGAAAA
GACTGGGAGCGCGCGCAGACGCTCCACAAGAACGACGATATCTCGACCGCCCAATTCGACCAATACCGCAATCGCTTCGA
AAACGCGCAGGCGATGTTGAAACAGGTGCAGGAGCGCGAGGCGCTGGTGCTGGCGGGTCCGCGAGTGGAGCAGGTGAACG
CGCAGCGCGGGCAGGTAGCGCGGGCGCAGGGGTCGGTGAAGATGGCGGAGGCGAATGCGCTGGAGTTGAAGCGGCGGGAG
CAGGAAGTCGCCACCCGGCGCGCCGAGATCGCGCGTTCCAAAGCCAACCTGGCGCTGATCGATTCGCAGCTCGCCGATAC
CACGGCGGTCTCGCCAGTGGATGGCGTGGTGCTGATGAAGGCGGTGGATGTAGGCGAAGTGGTGGCTCCGGGAACCACGA
TCGTGACGGTCGGCGACATCGATCACCCGTGGCTGCGAGGGTATGTAAACGAGACGGACCTGGGAAAGGTGAAGATCGGT
TCCAAGGTGCGGGTGACCACGGACACGTATCCCGGAAAGGTCTACAACGGGCGCGTGAGCTTCATCGCGTCGCAGGCGGA
GTTCACGCCGAAACAGATTCAGACGCAGCAGGAGCGCGTGAAGCTGGTGTACCGGGTCAAGATCGAAGTGGAAAATCCGG
GGCGCGAGTTGAAATCGAACATGCCGGCGGACGCCGAGATTGTATTGGCCCAGTAG

Upstream 100 bases:

>100_bases
GCGCGGGACAACCAGACGGCGGCGCTCTACAACTACAACGTGGCGAGAATCGACCTGGCGCAATCCGTAGGCGCGGTACG
CAGGATGGTGGAGTGACGAA

Downstream 100 bases:

>100_bases
ATGCAGCCGCACGAGCCGATTATCGAAACCCGCGACCTGACGCGCCGGTTCGGGCAACTGACGGCGGTGGACCACCTGAA
TCTTTCGGTGGCGCGAGGCG

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: ORF1; Fragment [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MKKRIPILLAALAVIGAATYWFRSAGKAPDNRLVISGNIELDEVNIAFKTAGRLTERAVDEGDGVKKGQVVARLDRDQLT
AQREREAAGLAASESQLLQAQTAVELQRASLAAEIETRQADLQSMEARLAELRNGARPQEKLDARAAVDAAASELERARK
DWERAQTLHKNDDISTAQFDQYRNRFENAQAMLKQVQEREALVLAGPRVEQVNAQRGQVARAQGSVKMAEANALELKRRE
QEVATRRAEIARSKANLALIDSQLADTTAVSPVDGVVLMKAVDVGEVVAPGTTIVTVGDIDHPWLRGYVNETDLGKVKIG
SKVRVTTDTYPGKVYNGRVSFIASQAEFTPKQIQTQQERVKLVYRVKIEVENPGRELKSNMPADAEIVLAQ

Sequences:

>Translated_391_residues
MKKRIPILLAALAVIGAATYWFRSAGKAPDNRLVISGNIELDEVNIAFKTAGRLTERAVDEGDGVKKGQVVARLDRDQLT
AQREREAAGLAASESQLLQAQTAVELQRASLAAEIETRQADLQSMEARLAELRNGARPQEKLDARAAVDAAASELERARK
DWERAQTLHKNDDISTAQFDQYRNRFENAQAMLKQVQEREALVLAGPRVEQVNAQRGQVARAQGSVKMAEANALELKRRE
QEVATRRAEIARSKANLALIDSQLADTTAVSPVDGVVLMKAVDVGEVVAPGTTIVTVGDIDHPWLRGYVNETDLGKVKIG
SKVRVTTDTYPGKVYNGRVSFIASQAEFTPKQIQTQQERVKLVYRVKIEVENPGRELKSNMPADAEIVLAQ
>Mature_391_residues
MKKRIPILLAALAVIGAATYWFRSAGKAPDNRLVISGNIELDEVNIAFKTAGRLTERAVDEGDGVKKGQVVARLDRDQLT
AQREREAAGLAASESQLLQAQTAVELQRASLAAEIETRQADLQSMEARLAELRNGARPQEKLDARAAVDAAASELERARK
DWERAQTLHKNDDISTAQFDQYRNRFENAQAMLKQVQEREALVLAGPRVEQVNAQRGQVARAQGSVKMAEANALELKRRE
QEVATRRAEIARSKANLALIDSQLADTTAVSPVDGVVLMKAVDVGEVVAPGTTIVTVGDIDHPWLRGYVNETDLGKVKIG
SKVRVTTDTYPGKVYNGRVSFIASQAEFTPKQIQTQQERVKLVYRVKIEVENPGRELKSNMPADAEIVLAQ

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1787013, Length=368, Percent_Identity=30.9782608695652, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1789900, Length=357, Percent_Identity=28.2913165266106, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003997
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 42952; Mature: 42952

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRIPILLAALAVIGAATYWFRSAGKAPDNRLVISGNIELDEVNIAFKTAGRLTERAVD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEEEHHHHHHHHHHHC
EGDGVKKGQVVARLDRDQLTAQREREAAGLAASESQLLQAQTAVELQRASLAAEIETRQA
CCCCCCCCHHEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLQSMEARLAELRNGARPQEKLDARAAVDAAASELERARKDWERAQTLHKNDDISTAQFD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QYRNRFENAQAMLKQVQEREALVLAGPRVEQVNAQRGQVARAQGSVKMAEANALELKRRE
HHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCHHHHCCCEEEECCHHHHHHHHH
QEVATRRAEIARSKANLALIDSQLADTTAVSPVDGVVLMKAVDVGEVVAPGTTIVTVGDI
HHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCEEEEEEECCCCEECCCCEEEEECCC
DHPWLRGYVNETDLGKVKIGSKVRVTTDTYPGKVYNGRVSFIASQAEFTPKQIQTQQERV
CCHHHHCCCCCCCCCEEEECCEEEEEECCCCCCEECCEEEEEECCCCCCHHHHHHHHHHE
KLVYRVKIEVENPGRELKSNMPADAEIVLAQ
EEEEEEEEEECCCCHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MKKRIPILLAALAVIGAATYWFRSAGKAPDNRLVISGNIELDEVNIAFKTAGRLTERAVD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEEEHHHHHHHHHHHC
EGDGVKKGQVVARLDRDQLTAQREREAAGLAASESQLLQAQTAVELQRASLAAEIETRQA
CCCCCCCCHHEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLQSMEARLAELRNGARPQEKLDARAAVDAAASELERARKDWERAQTLHKNDDISTAQFD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QYRNRFENAQAMLKQVQEREALVLAGPRVEQVNAQRGQVARAQGSVKMAEANALELKRRE
HHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCHHHHCCCEEEECCHHHHHHHHH
QEVATRRAEIARSKANLALIDSQLADTTAVSPVDGVVLMKAVDVGEVVAPGTTIVTVGDI
HHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCEEEEEEECCCCEECCCCEEEEECCC
DHPWLRGYVNETDLGKVKIGSKVRVTTDTYPGKVYNGRVSFIASQAEFTPKQIQTQQERV
CCHHHHCCCCCCCCCEEEECCEEEEEECCCCCCEECCEEEEEECCCCCCHHHHHHHHHHE
KLVYRVKIEVENPGRELKSNMPADAEIVLAQ
EEEEEEEEEECCCCHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10788346 [H]