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The map label for this gene is yfhP [C]

Identifier: 116624954

GI number: 116624954

Start: 7376496

End: 7376921

Strand: Direct

Name: yfhP [C]

Synonym: Acid_5883

Alternate gene names: 116624954

Gene position: 7376496-7376921 (Clockwise)

Preceding gene: 116624953

Following gene: 116624955

Centisome position: 74.02

GC content: 59.39

Gene sequence:

>426_bases
ATGCACACTTCCGTAAAAGGCGAATACGCACTTCAGGCGATCTTTGACCTCGCCTCGCAGCGCTCCGGCGAACCCATCCG
CATCGCCGATATCGCGCAGCGCCAAAAGATTCCGCAGAAGTTCCTGGAGCTGATCCTGGCCAGTCTGAAACAGGCCGGCT
TCGTGGAATCGCGCCGCGGCGCCGAAGGCGGCTATCTCCTTTCCCGTCCGGCAGATTCGCTGACCGTGGGCGAGGTGTTG
CGCTACGTCGAAGGCCCCCAGGGAAAAAGTCGCAAGGGCCGCAAAGGCCCCGCCACACCTTTTTCCGACATGTGGGAACA
GGTCGATGCCGCCGTCAGCAGCGTCATCGATAAAACCACCTTCGCCGACTTGCAGCGCGCGTGGCAGGAACAACAGAACA
AATACGTCTTGAATTGGGAGATTTAA

Upstream 100 bases:

>100_bases
ACACCAAATCCCACCTTTTTCCGCGATTCGCATTGCACCTTCCCTCCCCCAAGGCTACAATCTCTAGTGAGATACAGGTG
ATTCCCGGCACAAAACCCCG

Downstream 100 bases:

>100_bases
CTTTGCGCGTCTACGACGACAATTCGCTCAGCATTGGCCGCACCCCGCTGGTTCGTCTGAACCGCGTCATCGATGGCGGA
AAAGCCATTGTTCTCGCCAA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MHTSVKGEYALQAIFDLASQRSGEPIRIADIAQRQKIPQKFLELILASLKQAGFVESRRGAEGGYLLSRPADSLTVGEVL
RYVEGPQGKSRKGRKGPATPFSDMWEQVDAAVSSVIDKTTFADLQRAWQEQQNKYVLNWEI

Sequences:

>Translated_141_residues
MHTSVKGEYALQAIFDLASQRSGEPIRIADIAQRQKIPQKFLELILASLKQAGFVESRRGAEGGYLLSRPADSLTVGEVL
RYVEGPQGKSRKGRKGPATPFSDMWEQVDAAVSSVIDKTTFADLQRAWQEQQNKYVLNWEI
>Mature_141_residues
MHTSVKGEYALQAIFDLASQRSGEPIRIADIAQRQKIPQKFLELILASLKQAGFVESRRGAEGGYLLSRPADSLTVGEVL
RYVEGPQGKSRKGRKGPATPFSDMWEQVDAAVSSVIDKTTFADLQRAWQEQQNKYVLNWEI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=84, Percent_Identity=41.6666666666667, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15767; Mature: 15767

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTSVKGEYALQAIFDLASQRSGEPIRIADIAQRQKIPQKFLELILASLKQAGFVESRRG
CCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
AEGGYLLSRPADSLTVGEVLRYVEGPQGKSRKGRKGPATPFSDMWEQVDAAVSSVIDKTT
CCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FADLQRAWQEQQNKYVLNWEI
HHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MHTSVKGEYALQAIFDLASQRSGEPIRIADIAQRQKIPQKFLELILASLKQAGFVESRRG
CCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
AEGGYLLSRPADSLTVGEVLRYVEGPQGKSRKGRKGPATPFSDMWEQVDAAVSSVIDKTT
CCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FADLQRAWQEQQNKYVLNWEI
HHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]