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The map label for this gene is yihM [C]

Identifier: 116624943

GI number: 116624943

Start: 7359782

End: 7360915

Strand: Direct

Name: yihM [C]

Synonym: Acid_5870

Alternate gene names: 116624943

Gene position: 7359782-7360915 (Clockwise)

Preceding gene: 116624941

Following gene: 116624944

Centisome position: 73.85

GC content: 62.61

Gene sequence:

>1134_bases
ATGGGGAATTCCGCCCCGGACGGGTACCTGCGTTACAGTATCTTCATGCTTCGTCGCACCTTCCTTCAGACCCTGCCGGT
GGCAGCCGCTGCCCTTTCCGCGGCGCCCGCCGAAGAGGTCCCGGTAAAGCTCGGCTTCGATACCTACTCCGTGCGCGCGT
TCAAATGGAAGGGCATCGAACTCCTCGACTACGCCGCCAGCCAGAAGCTGGACACGATCCAGTTCTCCGCTCTCGGCGAT
TACGGCAGTCTCGACGCGCAGAACCTGCAGAAGGTGAAGGACCGCGCCGCGCAGTTGCATATCTCGATCGATAGCGGCAT
GGGCTGCATCTGCGATTCCAGCAAGAGCTTCAACAAGAAGGGTCCGCCCGCACGCGACCAGATCATCGAAGGCCTGAAGG
TCGCCCACGCGGTGGGCTCCAAATCCATGCGATGCTACATGGGTTCGAGCGAAGACCGGCTCGGCCCTCTCCCCATTGAG
GCCCACATGGAGAACACCATCAAGGTTTTCCGCTCGGTGCGCTCCGAGGCCATGGACCTCGGCGTCAAGATCGCGCTCGA
AAATCACTCCGGCGACATGCAGGCCCGCGAAGTGCGGACCATCATCGAGACCGCCGGCAAGGATTTCGTGGCCTCCTGCC
TGGACACCGGCAATCCCATCTGGTGTGTGGAAGACCCCTTCGTCGCGCTCGAGATCCTCGCGCCCTACGTGGTCACCACG
CACGTCCGCGACTCGGTCGTGTTCGAGACCCCCGAGGGCGCTGCCGGGCAGTGGGTCGCCTGCGGCGATGGCAATGTCGA
TCTCGTCCGCTTCGTGCAGGAATTCCGCCGTCTGTGCCCCACCTCCTCAATGCAGTTGGAAATCATCACCGGCCGCCCAC
CGCGTCCCCTGCCCTACCTGAAAGCCGATTTCTGGAAGGCATTCCCGAAGATGCCCGCCTGGGAGTTCGCGCGCTTTGTC
GAACTCGCCAAGACCGGCCACCCGTTCATGGGCGCGATGGTGATCGAGGATGTCCCCGGCAAGAAGGCCGCCGTGATGGA
CGAGGCACTCAAAGAGCAGCAGCGCGTGGATCTGGAACGCAGTTGGGAATACGCCCGCAAGAAAATGAACGTCGGCATCA
ACTGGCGCGCTTAA

Upstream 100 bases:

>100_bases
GCTGCCCACCTGGCCGAACAGAGATAACGCCATAACTGTCATAAAAACGAGCAATCTAACCATACCCTATCGACATTAGG
GTATATAGCTGAATCTGTCA

Downstream 100 bases:

>100_bases
GTCGCGTGCAGCACGCTCAAGTAGTCGTCGAGCGTGGCATCCAGCCGCTGATAGAGCAGGCTCGTGAAGCTCTCCGTACC
CTGCCCGGATTGTGCGCGCT

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain Protein

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MGNSAPDGYLRYSIFMLRRTFLQTLPVAAAALSAAPAEEVPVKLGFDTYSVRAFKWKGIELLDYAASQKLDTIQFSALGD
YGSLDAQNLQKVKDRAAQLHISIDSGMGCICDSSKSFNKKGPPARDQIIEGLKVAHAVGSKSMRCYMGSSEDRLGPLPIE
AHMENTIKVFRSVRSEAMDLGVKIALENHSGDMQAREVRTIIETAGKDFVASCLDTGNPIWCVEDPFVALEILAPYVVTT
HVRDSVVFETPEGAAGQWVACGDGNVDLVRFVQEFRRLCPTSSMQLEIITGRPPRPLPYLKADFWKAFPKMPAWEFARFV
ELAKTGHPFMGAMVIEDVPGKKAAVMDEALKEQQRVDLERSWEYARKKMNVGINWRA

Sequences:

>Translated_377_residues
MGNSAPDGYLRYSIFMLRRTFLQTLPVAAAALSAAPAEEVPVKLGFDTYSVRAFKWKGIELLDYAASQKLDTIQFSALGD
YGSLDAQNLQKVKDRAAQLHISIDSGMGCICDSSKSFNKKGPPARDQIIEGLKVAHAVGSKSMRCYMGSSEDRLGPLPIE
AHMENTIKVFRSVRSEAMDLGVKIALENHSGDMQAREVRTIIETAGKDFVASCLDTGNPIWCVEDPFVALEILAPYVVTT
HVRDSVVFETPEGAAGQWVACGDGNVDLVRFVQEFRRLCPTSSMQLEIITGRPPRPLPYLKADFWKAFPKMPAWEFARFV
ELAKTGHPFMGAMVIEDVPGKKAAVMDEALKEQQRVDLERSWEYARKKMNVGINWRA
>Mature_376_residues
GNSAPDGYLRYSIFMLRRTFLQTLPVAAAALSAAPAEEVPVKLGFDTYSVRAFKWKGIELLDYAASQKLDTIQFSALGDY
GSLDAQNLQKVKDRAAQLHISIDSGMGCICDSSKSFNKKGPPARDQIIEGLKVAHAVGSKSMRCYMGSSEDRLGPLPIEA
HMENTIKVFRSVRSEAMDLGVKIALENHSGDMQAREVRTIIETAGKDFVASCLDTGNPIWCVEDPFVALEILAPYVVTTH
VRDSVVFETPEGAAGQWVACGDGNVDLVRFVQEFRRLCPTSSMQLEIITGRPPRPLPYLKADFWKAFPKMPAWEFARFVE
LAKTGHPFMGAMVIEDVPGKKAAVMDEALKEQQRVDLERSWEYARKKMNVGINWRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41831; Mature: 41699

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNSAPDGYLRYSIFMLRRTFLQTLPVAAAALSAAPAEEVPVKLGFDTYSVRAFKWKGIE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCEEEEEEEECCCH
LLDYAASQKLDTIQFSALGDYGSLDAQNLQKVKDRAAQLHISIDSGMGCICDSSKSFNKK
HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEEECCCCCCCCC
GPPARDQIIEGLKVAHAVGSKSMRCYMGSSEDRLGPLPIEAHMENTIKVFRSVRSEAMDL
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GVKIALENHSGDMQAREVRTIIETAGKDFVASCLDTGNPIWCVEDPFVALEILAPYVVTT
CEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHEE
HVRDSVVFETPEGAAGQWVACGDGNVDLVRFVQEFRRLCPTSSMQLEIITGRPPRPLPYL
CCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCH
KADFWKAFPKMPAWEFARFVELAKTGHPFMGAMVIEDVPGKKAAVMDEALKEQQRVDLER
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHH
SWEYARKKMNVGINWRA
HHHHHHHHHCCCEEECC
>Mature Secondary Structure 
GNSAPDGYLRYSIFMLRRTFLQTLPVAAAALSAAPAEEVPVKLGFDTYSVRAFKWKGIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCEEEEEEEECCCH
LLDYAASQKLDTIQFSALGDYGSLDAQNLQKVKDRAAQLHISIDSGMGCICDSSKSFNKK
HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEEECCCCCCCCC
GPPARDQIIEGLKVAHAVGSKSMRCYMGSSEDRLGPLPIEAHMENTIKVFRSVRSEAMDL
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GVKIALENHSGDMQAREVRTIIETAGKDFVASCLDTGNPIWCVEDPFVALEILAPYVVTT
CEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHEE
HVRDSVVFETPEGAAGQWVACGDGNVDLVRFVQEFRRLCPTSSMQLEIITGRPPRPLPYL
CCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCH
KADFWKAFPKMPAWEFARFVELAKTGHPFMGAMVIEDVPGKKAAVMDEALKEQQRVDLER
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHH
SWEYARKKMNVGINWRA
HHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA