| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624834
Identifier: 116624834
GI number: 116624834
Start: 7213126
End: 7214277
Strand: Reverse
Name: 116624834
Synonym: Acid_5758
Alternate gene names: NA
Gene position: 7214277-7213126 (Counterclockwise)
Preceding gene: 116624837
Following gene: 116624833
Centisome position: 72.39
GC content: 61.98
Gene sequence:
>1152_bases TTGCGCTACGTGGTGGAGGCCTATCTGGAGAACCACTTCGACCGCGTGAAAGAGCGGACGATCGGGTTCGAGGTCTTCCA GCGCGATCCGGATTACGACACGAATCAGGATTCCGTGGTCCGAACGACCGCGGCCGAGATTCGCAAGAAACTGGCGCAGT ACTATCTTGAACCCGGGCATGAGGGTGAGCTGCGTGTCCTGTTGCCGCAGGGCTCGTACCTGCCGGAGTTTCGTGCAGCG CCGGCGGTGGTTCCGGCGCCGCTGCCTGCTCCGCCGCCTCCCGACGAGAAGGCTCCAGCCGCCGGTACGAGAGTGGTCCG GGAGCGGCTGGTCGGGGTGGCAATCGCGCTCGCGGTGGTGACGGTCGCGGGACTGGGGGCGTACGGTATTTCAAGGCCGC GCACCAACGAGTTAAGCCTGTTTTGGAAACCGCTGCTGGAAGATAGTTCGAGCGCGGTGATCTGCGTGGGGCAGCCGCTG CGGGTGTATATCTTCGAGGGCAACCGGACCGCCGATTTGAACGAGAAGATGGTGGGCACGTTGACCACACCGCCGGCCAG TCCGGAGGTTCGCGAGCAGACCACGATCACGCTTTCGGAGTTGAAATCGGCGGGGGACCGCTATTACTCGGTGGGCGACT ACCTGGCCTCGGTGCGGCTGGCCGAGTTTCTGGGGCAGCGCGCCAAGCCATTCCAGATTATCGGCGATCGCAGCGCTGCG TTGAAAGATCTGCGCGGAAGGCCGGCGGTTTTGATCGGGCAATTCAATAATCTTTGGACGATGGGGCTGACCGGCAACCT GCGCTATTACATCGACCGCAGCACGCATTTCAGCTATGACGTGCTTGACCGGCAGAATCCGGGCAAGGTGATGTTCTCAG CGGTCCGCAACGCCAGCCGGCCGGAGGAATATGCGATCGTGAGCCGGATCTTCGACGCACCCACGGAGAAGACGGTGGTG TCGATCGCGGGTATGACCTTCAACGGCACCACGGCGGCGGGTGAATTTCTGACCAACGAGCGTTATATGCGGGAGGCGTT CGGCCGGGCTCCCTCAGGGTGGAATCAGAAGAACATTCAGGTGATCCTGAAGACTACGATGATGGGCGGCGCCACGGGAC CACCCAAGGTTGTTGCCACCTACTTCTGGTAA
Upstream 100 bases:
>100_bases TCAGGTCTTAACGGGTGTCGATGATACTGCGGTTCGAGAGCAGTTAGGCCGGCTTCTAGCCAGTGGGCCATTCCGGACGA GTAAGCGGTGCCAGTCCCTT
Downstream 100 bases:
>100_bases GCGGGTGTGCATGGCAGATTGCAGTAGGGAAGAGGCATGTAGATCGCTCCCTTACGGTCGCGGTTCGCGGTGCGGGCGAG TGCGCAGATGGCGAATGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MRYVVEAYLENHFDRVKERTIGFEVFQRDPDYDTNQDSVVRTTAAEIRKKLAQYYLEPGHEGELRVLLPQGSYLPEFRAA PAVVPAPLPAPPPPDEKAPAAGTRVVRERLVGVAIALAVVTVAGLGAYGISRPRTNELSLFWKPLLEDSSSAVICVGQPL RVYIFEGNRTADLNEKMVGTLTTPPASPEVREQTTITLSELKSAGDRYYSVGDYLASVRLAEFLGQRAKPFQIIGDRSAA LKDLRGRPAVLIGQFNNLWTMGLTGNLRYYIDRSTHFSYDVLDRQNPGKVMFSAVRNASRPEEYAIVSRIFDAPTEKTVV SIAGMTFNGTTAAGEFLTNERYMREAFGRAPSGWNQKNIQVILKTTMMGGATGPPKVVATYFW
Sequences:
>Translated_383_residues MRYVVEAYLENHFDRVKERTIGFEVFQRDPDYDTNQDSVVRTTAAEIRKKLAQYYLEPGHEGELRVLLPQGSYLPEFRAA PAVVPAPLPAPPPPDEKAPAAGTRVVRERLVGVAIALAVVTVAGLGAYGISRPRTNELSLFWKPLLEDSSSAVICVGQPL RVYIFEGNRTADLNEKMVGTLTTPPASPEVREQTTITLSELKSAGDRYYSVGDYLASVRLAEFLGQRAKPFQIIGDRSAA LKDLRGRPAVLIGQFNNLWTMGLTGNLRYYIDRSTHFSYDVLDRQNPGKVMFSAVRNASRPEEYAIVSRIFDAPTEKTVV SIAGMTFNGTTAAGEFLTNERYMREAFGRAPSGWNQKNIQVILKTTMMGGATGPPKVVATYFW >Mature_383_residues MRYVVEAYLENHFDRVKERTIGFEVFQRDPDYDTNQDSVVRTTAAEIRKKLAQYYLEPGHEGELRVLLPQGSYLPEFRAA PAVVPAPLPAPPPPDEKAPAAGTRVVRERLVGVAIALAVVTVAGLGAYGISRPRTNELSLFWKPLLEDSSSAVICVGQPL RVYIFEGNRTADLNEKMVGTLTTPPASPEVREQTTITLSELKSAGDRYYSVGDYLASVRLAEFLGQRAKPFQIIGDRSAA LKDLRGRPAVLIGQFNNLWTMGLTGNLRYYIDRSTHFSYDVLDRQNPGKVMFSAVRNASRPEEYAIVSRIFDAPTEKTVV SIAGMTFNGTTAAGEFLTNERYMREAFGRAPSGWNQKNIQVILKTTMMGGATGPPKVVATYFW
Specific function: Unknown
COG id: COG5616
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42449; Mature: 42449
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVVEAYLENHFDRVKERTIGFEVFQRDPDYDTNQDSVVRTTAAEIRKKLAQYYLEPGH CCHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC EGELRVLLPQGSYLPEFRAAPAVVPAPLPAPPPPDEKAPAAGTRVVRERLVGVAIALAVV CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TVAGLGAYGISRPRTNELSLFWKPLLEDSSSAVICVGQPLRVYIFEGNRTADLNEKMVGT HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEE LTTPPASPEVREQTTITLSELKSAGDRYYSVGDYLASVRLAEFLGQRAKPFQIIGDRSAA EECCCCCCCCCHHHEEEHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH LKDLRGRPAVLIGQFNNLWTMGLTGNLRYYIDRSTHFSYDVLDRQNPGKVMFSAVRNASR HHHHCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCC PEEYAIVSRIFDAPTEKTVVSIAGMTFNGTTAAGEFLTNERYMREAFGRAPSGWNQKNIQ CHHHHHHHHHHCCCCCCEEEEEECEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE VILKTTMMGGATGPPKVVATYFW EEEEEHHCCCCCCCCCEEEEECC >Mature Secondary Structure MRYVVEAYLENHFDRVKERTIGFEVFQRDPDYDTNQDSVVRTTAAEIRKKLAQYYLEPGH CCHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC EGELRVLLPQGSYLPEFRAAPAVVPAPLPAPPPPDEKAPAAGTRVVRERLVGVAIALAVV CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH TVAGLGAYGISRPRTNELSLFWKPLLEDSSSAVICVGQPLRVYIFEGNRTADLNEKMVGT HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEE LTTPPASPEVREQTTITLSELKSAGDRYYSVGDYLASVRLAEFLGQRAKPFQIIGDRSAA EECCCCCCCCCHHHEEEHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH LKDLRGRPAVLIGQFNNLWTMGLTGNLRYYIDRSTHFSYDVLDRQNPGKVMFSAVRNASR HHHHCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCC PEEYAIVSRIFDAPTEKTVVSIAGMTFNGTTAAGEFLTNERYMREAFGRAPSGWNQKNIQ CHHHHHHHHHHCCCCCCEEEEEECEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE VILKTTMMGGATGPPKVVATYFW EEEEEHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA