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The map label for this gene is 116624833

Identifier: 116624833

GI number: 116624833

Start: 7212290

End: 7212991

Strand: Reverse

Name: 116624833

Synonym: Acid_5757

Alternate gene names: NA

Gene position: 7212991-7212290 (Counterclockwise)

Preceding gene: 116624834

Following gene: 116624832

Centisome position: 72.38

GC content: 67.24

Gene sequence:

>702_bases
ATGGCGGGCGATCCGGATACGGCGATCGGCGGGGCGGGGAATCGATTTCCTTCGACGCAGATTTCGCTGATCGAGGCGGC
GGGCAGCGGCCTCGCCGGCGAAGCGCTGGAGCGCGTGATCGCGCTGTACTGGAAGCCTGTCTATGCCTTCATCCGCTTCA
AATGGCGTAAGGACAACGAGTCGGCCAAGGACCTGACGCAGGGGTTCTTCACAAGCGCGCTGCAGCGGGAGTTTTTCCAG
CGCTTCGACCCGGCGAAGGCCTCGTTCCGGACGTATCTGCGGATGGCGGTGGAGCGCTTCGCGGCCAACGAGCACTCTTC
CGGGCAGCGGCAGAAGCGCGGCGGCGGGATCGAGTTCGCGGAATTGGACGAGCAGGCGGCCGGCGGCGAATCGCCCGAAG
ACCTGTTCTTCCGGGAATGGAGGCGCCAGCTGTTTGCGCTGGCGATCGAGGACCTGTGCGCGCGCTGCACGGAGGGCGGC
AAGCTCACCGAATGGCGTGTGTTCGAGGCGTACGACCTGGCCGACGGAGAGAGGCCGACCTATGCGGAACTCGCTGGGCG
GCATGGAATCGCGGAGACCGCCGTCACCAATGCGCTGGCGTGGGCGCGGCGCACGCTGCGCGCTCTATTGACGGCGCGGC
TGCGCGGGGTGACCTCGGGCGAGCGCGAATTGCGCGAGGAGATGCGGCGGATATGGAGCTGA

Upstream 100 bases:

>100_bases
GCATGTAGATCGCTCCCTTACGGTCGCGGTTCGCGGTGCGGGCGAGTGCGCAGATGGCGAATGCGTAGATCGGGATAGCG
CGTGGTGGGATCGGGGGCTA

Downstream 100 bases:

>100_bases
GCGATTCGGTGCTGCAACATCTGCGCGATGTGGTCGATTTGCCGGATCTGGCCGGAACACGCTACGAACTGGAAGGCGAG
ATTGGACGCGGCGGGCTGGG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MAGDPDTAIGGAGNRFPSTQISLIEAAGSGLAGEALERVIALYWKPVYAFIRFKWRKDNESAKDLTQGFFTSALQREFFQ
RFDPAKASFRTYLRMAVERFAANEHSSGQRQKRGGGIEFAELDEQAAGGESPEDLFFREWRRQLFALAIEDLCARCTEGG
KLTEWRVFEAYDLADGERPTYAELAGRHGIAETAVTNALAWARRTLRALLTARLRGVTSGERELREEMRRIWS

Sequences:

>Translated_233_residues
MAGDPDTAIGGAGNRFPSTQISLIEAAGSGLAGEALERVIALYWKPVYAFIRFKWRKDNESAKDLTQGFFTSALQREFFQ
RFDPAKASFRTYLRMAVERFAANEHSSGQRQKRGGGIEFAELDEQAAGGESPEDLFFREWRRQLFALAIEDLCARCTEGG
KLTEWRVFEAYDLADGERPTYAELAGRHGIAETAVTNALAWARRTLRALLTARLRGVTSGERELREEMRRIWS
>Mature_232_residues
AGDPDTAIGGAGNRFPSTQISLIEAAGSGLAGEALERVIALYWKPVYAFIRFKWRKDNESAKDLTQGFFTSALQREFFQR
FDPAKASFRTYLRMAVERFAANEHSSGQRQKRGGGIEFAELDEQAAGGESPEDLFFREWRRQLFALAIEDLCARCTEGGK
LTEWRVFEAYDLADGERPTYAELAGRHGIAETAVTNALAWARRTLRALLTARLRGVTSGERELREEMRRIWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26267; Mature: 26136

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDPDTAIGGAGNRFPSTQISLIEAAGSGLAGEALERVIALYWKPVYAFIRFKWRKDNE
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SAKDLTQGFFTSALQREFFQRFDPAKASFRTYLRMAVERFAANEHSSGQRQKRGGGIEFA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
ELDEQAAGGESPEDLFFREWRRQLFALAIEDLCARCTEGGKLTEWRVFEAYDLADGERPT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCC
YAELAGRHGIAETAVTNALAWARRTLRALLTARLRGVTSGERELREEMRRIWS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AGDPDTAIGGAGNRFPSTQISLIEAAGSGLAGEALERVIALYWKPVYAFIRFKWRKDNE
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SAKDLTQGFFTSALQREFFQRFDPAKASFRTYLRMAVERFAANEHSSGQRQKRGGGIEFA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
ELDEQAAGGESPEDLFFREWRRQLFALAIEDLCARCTEGGKLTEWRVFEAYDLADGERPT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCC
YAELAGRHGIAETAVTNALAWARRTLRALLTARLRGVTSGERELREEMRRIWS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA