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The map label for this gene is etfB [H]

Identifier: 116624774

GI number: 116624774

Start: 7138134

End: 7138898

Strand: Direct

Name: etfB [H]

Synonym: Acid_5698

Alternate gene names: 116624774

Gene position: 7138134-7138898 (Clockwise)

Preceding gene: 116624769

Following gene: 116624775

Centisome position: 71.63

GC content: 61.96

Gene sequence:

>765_bases
GTGAAGATCATCGTTGCCGTCAAGCAGGTGCCGGTGCGAGACTCCGCTCTCCGCATTGACACTTCCGGTAAGTGGATCGA
AGAACAAGACCTTAGCTTTGAAATCAACGAGCCGGACGCCTACGCTCTCGAAGCCGCGCTGCTCCTCAAGGAAAAGCACG
GCGGCGAAGTTGTCGTGCTGTGCGCTGGCCCCGAGCGCGCGGGGCAGACCATCCGCGAGGCTCTCGCCAAAGGGGCCGAT
CGCGCCATTCATCTTTTCTGCGACGATTTGGTGAGTTTGGATACTCTGGCGCTCTCCCGCCGCCTCGCAGCCGCCGCGGC
TGCCGAGCGCGCGGACCTGATCCTCACCGGGCTCCAGTCCGACGATCTCGGGCTTGGACAGACTGGCGTCGTCATGGCCG
AGATCCTCGGCATCCCGCATGCCGCAATCGTCATGCAAATTGAAATCGCCGGCGCCGGATTGCGCATCAAGCGTGAATTG
GAAGATGGCTGGTTTCAGTGGGTGCAGCTCCCGATGCCCGCGCTTCTTACGGTCCAATCCGGCATCAGCCCGCTGCGCTA
CGCCACCCTTATGGGCATCAAAAAGGCGAAAACCAAAGACGTCCGCCGCATCGTGCCGGACCAGCCGGCCGCATCCCCGA
CGGTCGCCCTGCAACGCATCTACCTCCCCCAACGTAAGAAGGAAACACAGATCCTCGCCGGCACTCCGGCGGAATCCGCA
GCCAAGCTGGCCGACGTCCTGAAATTCGAAGTGAGGGTCATATGA

Upstream 100 bases:

>100_bases
TATCTTACCCACGGGTAAGCAAAAACGCAAGAGGATTACTTGCGCCACGGACACCCACCGTTCTCCTTGCCGACGCAGGC
AGTCCTTCGGAGAAACTGTC

Downstream 100 bases:

>100_bases
AAGGCGTGCTCGTCATTCTGGAATATCGCGGCGCCTGGAACCGGATGTCGTGGGAAGCCCTCGCCGCAGGGCGCGGAATC
GCCGCCCAGCTCCACCAACC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKIIVAVKQVPVRDSALRIDTSGKWIEEQDLSFEINEPDAYALEAALLLKEKHGGEVVVLCAGPERAGQTIREALAKGAD
RAIHLFCDDLVSLDTLALSRRLAAAAAAERADLILTGLQSDDLGLGQTGVVMAEILGIPHAAIVMQIEIAGAGLRIKREL
EDGWFQWVQLPMPALLTVQSGISPLRYATLMGIKKAKTKDVRRIVPDQPAASPTVALQRIYLPQRKKETQILAGTPAESA
AKLADVLKFEVRVI

Sequences:

>Translated_254_residues
MKIIVAVKQVPVRDSALRIDTSGKWIEEQDLSFEINEPDAYALEAALLLKEKHGGEVVVLCAGPERAGQTIREALAKGAD
RAIHLFCDDLVSLDTLALSRRLAAAAAAERADLILTGLQSDDLGLGQTGVVMAEILGIPHAAIVMQIEIAGAGLRIKREL
EDGWFQWVQLPMPALLTVQSGISPLRYATLMGIKKAKTKDVRRIVPDQPAASPTVALQRIYLPQRKKETQILAGTPAESA
AKLADVLKFEVRVI
>Mature_254_residues
MKIIVAVKQVPVRDSALRIDTSGKWIEEQDLSFEINEPDAYALEAALLLKEKHGGEVVVLCAGPERAGQTIREALAKGAD
RAIHLFCDDLVSLDTLALSRRLAAAAAAERADLILTGLQSDDLGLGQTGVVMAEILGIPHAAIVMQIEIAGAGLRIKREL
EDGWFQWVQLPMPALLTVQSGISPLRYATLMGIKKAKTKDVRRIVPDQPAASPTVALQRIYLPQRKKETQILAGTPAESA
AKLADVLKFEVRVI

Specific function: The electron transfer flavoprotein of this bacterium serves as an electron acceptor specifically for trimethylamine dehydrogenase. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=254, Percent_Identity=33.0708661417323, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI62420877, Length=213, Percent_Identity=36.150234741784, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI25141345, Length=208, Percent_Identity=32.6923076923077, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6321646, Length=208, Percent_Identity=27.8846153846154, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24651147, Length=195, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24651145, Length=195, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27496; Mature: 27496

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIVAVKQVPVRDSALRIDTSGKWIEEQDLSFEINEPDAYALEAALLLKEKHGGEVVVL
CEEEEEEECCCCCCCEEEEECCCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEE
CAGPERAGQTIREALAKGADRAIHLFCDDLVSLDTLALSRRLAAAAAAERADLILTGLQS
ECCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
DDLGLGQTGVVMAEILGIPHAAIVMQIEIAGAGLRIKRELEDGWFQWVQLPMPALLTVQS
CCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEHHHHHHHHHHHCCCCCEEEHHC
GISPLRYATLMGIKKAKTKDVRRIVPDQPAASPTVALQRIYLPQRKKETQILAGTPAESA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHH
AKLADVLKFEVRVI
HHHHHHHHEEEEEC
>Mature Secondary Structure
MKIIVAVKQVPVRDSALRIDTSGKWIEEQDLSFEINEPDAYALEAALLLKEKHGGEVVVL
CEEEEEEECCCCCCCEEEEECCCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEE
CAGPERAGQTIREALAKGADRAIHLFCDDLVSLDTLALSRRLAAAAAAERADLILTGLQS
ECCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
DDLGLGQTGVVMAEILGIPHAAIVMQIEIAGAGLRIKRELEDGWFQWVQLPMPALLTVQS
CCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEHHHHHHHHHHHCCCCCEEEHHC
GISPLRYATLMGIKKAKTKDVRRIVPDQPAASPTVALQRIYLPQRKKETQILAGTPAESA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHH
AKLADVLKFEVRVI
HHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7798207; 12567183 [H]