| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116624748
Identifier: 116624748
GI number: 116624748
Start: 7106671
End: 7107753
Strand: Reverse
Name: 116624748
Synonym: Acid_5672
Alternate gene names: NA
Gene position: 7107753-7106671 (Counterclockwise)
Preceding gene: 116624750
Following gene: 116624747
Centisome position: 71.32
GC content: 67.77
Gene sequence:
>1083_bases ATGCTCAAGCTATCGCACGTATTGCCGTTTCTGCTGCTTACTTCCTGCGCCGTCCGCCAGTCCGGTCCGCGAACGTGGCG CTTTGCCGATCGCACGCTGATGCCTCCGGGGGTCGCCGCCCCCGACCTGGCCGCGCGCACCTTCACCGCCCCCCTCGCGA TCACGGGCGACTGCCTGGTGAGCGACGCCCTGAGCGTCCAGCGACGGCATTCCCGCATCCTGGTCACGGTCCACCGCGAG GCCCTGCTGCGCCAGCCTCCGGGGTGGCTGGCCGATTGGATCGATCGTGCCGTGTCGCAGGGCTGCATCCCGGCCGGACA GGGTCCGCTGCTCACCGCACGGATACTGGAATCGCTACCGCTGCCGGACGGGGCCGCACTGCGCCTGCTCCGCGCCGAGG GACGGTACAACTTTGTCGAGCTGCTGCCGGGCACCCGGCTTCAGGTGGTGAGCCCCGTGCTGAGTTCCGGGACCACGCTC GACGCCGCTCCGGAAAGCCCGATGAAAGTCTCCGGCAAGGACACGAGCATTACGGTAGAGATGCAGGCGCCCGCCAACCT GATTGGGGTGGAGACCGCGTGGTACGACCTGATCGCCAAGCCCGGCGGCCGCGGATCGACGATTGTTCCCACGTCGGCGC GGGTCACCATCGGCGGGCAGGCGGAAGACCGGACCGGGCCGGCGGTCAATCTTTTCCGGTTCCCTCCGGAGGCGGCGTTT TATCGCCTCTTCTACAAGGCCGACGAGAGCGAGGTCCTGGCGCTGGCACCGACGCGCGCCGCGCTGCCCGCGGACCCGGA CACCTGCGGGCAGCCCGCCTGCTTTCCGATTCCGCGAGGAGTGGGCGTGAACCCCTACATGCGCATCGAGGTGAATGGCG CGCCGCTCACGGTGCCGGTGAATGCGACGGTGCGCAGCGTACTTCAGGCCGCCAGGCAACGGCCCGAGGAGGTGCTGCCG ACCCTTGCCATAACCAAGCCCTTCGCCGGACGTCCAACCGCCTTGGAATTCGACCGGGGAAAACAGGATATCCTCAACCT GACACTGACGGGTGATGAGCAACTCCGTTGGGGTTCAAGATGA
Upstream 100 bases:
>100_bases GTATAAGGTGAGCAAACCCCAGAACCATGGAGGCCACCCGGGGCGAACCGGCATGCCCGCATTATCGCATCCCTGCCTGA TGTGCTAAATTTTTAGCAGG
Downstream 100 bases:
>100_bases GAGACTTTCTCCGCGGAGGGATGCAGGAAACGCCATGCTTGTTCTCACTCGCAGCCAGATCGCCGGGCTCCTCAAGTTCG ATGAGTACGTGACGGTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MLKLSHVLPFLLLTSCAVRQSGPRTWRFADRTLMPPGVAAPDLAARTFTAPLAITGDCLVSDALSVQRRHSRILVTVHRE ALLRQPPGWLADWIDRAVSQGCIPAGQGPLLTARILESLPLPDGAALRLLRAEGRYNFVELLPGTRLQVVSPVLSSGTTL DAAPESPMKVSGKDTSITVEMQAPANLIGVETAWYDLIAKPGGRGSTIVPTSARVTIGGQAEDRTGPAVNLFRFPPEAAF YRLFYKADESEVLALAPTRAALPADPDTCGQPACFPIPRGVGVNPYMRIEVNGAPLTVPVNATVRSVLQAARQRPEEVLP TLAITKPFAGRPTALEFDRGKQDILNLTLTGDEQLRWGSR
Sequences:
>Translated_360_residues MLKLSHVLPFLLLTSCAVRQSGPRTWRFADRTLMPPGVAAPDLAARTFTAPLAITGDCLVSDALSVQRRHSRILVTVHRE ALLRQPPGWLADWIDRAVSQGCIPAGQGPLLTARILESLPLPDGAALRLLRAEGRYNFVELLPGTRLQVVSPVLSSGTTL DAAPESPMKVSGKDTSITVEMQAPANLIGVETAWYDLIAKPGGRGSTIVPTSARVTIGGQAEDRTGPAVNLFRFPPEAAF YRLFYKADESEVLALAPTRAALPADPDTCGQPACFPIPRGVGVNPYMRIEVNGAPLTVPVNATVRSVLQAARQRPEEVLP TLAITKPFAGRPTALEFDRGKQDILNLTLTGDEQLRWGSR >Mature_360_residues MLKLSHVLPFLLLTSCAVRQSGPRTWRFADRTLMPPGVAAPDLAARTFTAPLAITGDCLVSDALSVQRRHSRILVTVHRE ALLRQPPGWLADWIDRAVSQGCIPAGQGPLLTARILESLPLPDGAALRLLRAEGRYNFVELLPGTRLQVVSPVLSSGTTL DAAPESPMKVSGKDTSITVEMQAPANLIGVETAWYDLIAKPGGRGSTIVPTSARVTIGGQAEDRTGPAVNLFRFPPEAAF YRLFYKADESEVLALAPTRAALPADPDTCGQPACFPIPRGVGVNPYMRIEVNGAPLTVPVNATVRSVLQAARQRPEEVLP TLAITKPFAGRPTALEFDRGKQDILNLTLTGDEQLRWGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38742; Mature: 38742
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLSHVLPFLLLTSCAVRQSGPRTWRFADRTLMPPGVAAPDLAARTFTAPLAITGDCLV CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHEECCEEEECHHHH SDALSVQRRHSRILVTVHREALLRQPPGWLADWIDRAVSQGCIPAGQGPLLTARILESLP HHHHHHHHCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC LPDGAALRLLRAEGRYNFVELLPGTRLQVVSPVLSSGTTLDAAPESPMKVSGKDTSITVE CCCCHHEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCEECCCCCCCCEECCCCCEEEEE MQAPANLIGVETAWYDLIAKPGGRGSTIVPTSARVTIGGQAEDRTGPAVNLFRFPPEAAF EECCCCEEEHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCCCCCCEEEEEECCCHHHH YRLFYKADESEVLALAPTRAALPADPDTCGQPACFPIPRGVGVNPYMRIEVNGAPLTVPV EEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEC NATVRSVLQAARQRPEEVLPTLAITKPFAGRPTALEFDRGKQDILNLTLTGDEQLRWGSR CHHHHHHHHHHHHCHHHHCCEEEECCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MLKLSHVLPFLLLTSCAVRQSGPRTWRFADRTLMPPGVAAPDLAARTFTAPLAITGDCLV CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHEECCEEEECHHHH SDALSVQRRHSRILVTVHREALLRQPPGWLADWIDRAVSQGCIPAGQGPLLTARILESLP HHHHHHHHCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC LPDGAALRLLRAEGRYNFVELLPGTRLQVVSPVLSSGTTLDAAPESPMKVSGKDTSITVE CCCCHHEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCEECCCCCCCCEECCCCCEEEEE MQAPANLIGVETAWYDLIAKPGGRGSTIVPTSARVTIGGQAEDRTGPAVNLFRFPPEAAF EECCCCEEEHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCCCCCCEEEEEECCCHHHH YRLFYKADESEVLALAPTRAALPADPDTCGQPACFPIPRGVGVNPYMRIEVNGAPLTVPV EEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEC NATVRSVLQAARQRPEEVLPTLAITKPFAGRPTALEFDRGKQDILNLTLTGDEQLRWGSR CHHHHHHHHHHHHCHHHHCCEEEECCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA