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The map label for this gene is ocd2 [H]

Identifier: 116624747

GI number: 116624747

Start: 7105656

End: 7106636

Strand: Reverse

Name: ocd2 [H]

Synonym: Acid_5671

Alternate gene names: 116624747

Gene position: 7106636-7105656 (Counterclockwise)

Preceding gene: 116624748

Following gene: 116624745

Centisome position: 71.31

GC content: 64.53

Gene sequence:

>981_bases
ATGCTTGTTCTCACTCGCAGCCAGATCGCCGGGCTCCTCAAGTTCGATGAGTACGTGACGGTGGTGGGCGCGGCCTTCCG
CGCCCATGCCGAGGGCTGCTCCATCCCGCCCGCCCTGATGCACGTGAGCGCGCCGGACGGAGAGTTCCACATCAAGGCCG
GCGGATTGCTGACTCCCGAGCCGTACTTCGCGCTCAAATCCAACGGAGGATTCTTTCTCAACCGCGAGCGCTACGGGATG
CCCAACATCCAGGGCATGGTGATTTTAGCCAGCGCCTCCGACGGCCTGCCGCTTGCGGTGATGGATTCCATGGAGATCAC
GATCCAACGAACCGGCGCCGCCACGGCGATCGCGGCGCGGTACCTGGCGCGGCGGGATTCCTCGGTGGTCACGATATGCG
GCTGCGGCAATCAGGGACGAATTCAGCTGCGCGCGATCTGCCACTCGCTACCCATCCGCAAGGCCTTCGCGTTTGGACTC
ACGCTCGAGGGATCGCGCGCGTTTGCCACGGCTATGAGCGCCGAACTCAAGATTATCGTGGAAGCCACGGAGGATCTACC
GGCGGCACTGCGCCAAAGCGACGTGTGCGTCACCTGCACACCGGCGAGGAAGGCATTGATCTTCGCAGCCGATGTGCCGA
GAGGGATGTTCCTCTCCGCCGTCGGCGCGGACAGTCCGGACAAGCAGGAACTCGACCAGCACCTGCTGCCGCTGGCCGGG
GTGTATGGCGATCTGTTGGAGCAATGCGCCCAGGTCGGCGAGTTCCATCACGGCATTGAGCACGGGCTGGTCACGCGCGA
GGATTTCCGCGGTGAACTGGGCGCATTGATTGCCGGCACGGCTCGCGGGCGCACGAGCGCGGACGAGATCACGATTTACG
ATTCCACGGGGACGGCCATTCAGGACGTTGCCGCGGCGGTCGCGGTTTATCGCAAGGCGAAGGCGGCGGGCATCGGGACG
GAGTTGGATTTGGCCACGTAG

Upstream 100 bases:

>100_bases
GGAAAACAGGATATCCTCAACCTGACACTGACGGGTGATGAGCAACTCCGTTGGGGTTCAAGATGAGAGACTTTCTCCGC
GGAGGGATGCAGGAAACGCC

Downstream 100 bases:

>100_bases
AACGCCGGCTGAAAGCCGGCGGCAGCCAGGATTGGATGCCCCAGCGGCATGACCGCAAATTGGGTAACGGATTGGATGAG
GGGCGCGCGGTCGGCGGGGT

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLVLTRSQIAGLLKFDEYVTVVGAAFRAHAEGCSIPPALMHVSAPDGEFHIKAGGLLTPEPYFALKSNGGFFLNRERYGM
PNIQGMVILASASDGLPLAVMDSMEITIQRTGAATAIAARYLARRDSSVVTICGCGNQGRIQLRAICHSLPIRKAFAFGL
TLEGSRAFATAMSAELKIIVEATEDLPAALRQSDVCVTCTPARKALIFAADVPRGMFLSAVGADSPDKQELDQHLLPLAG
VYGDLLEQCAQVGEFHHGIEHGLVTREDFRGELGALIAGTARGRTSADEITIYDSTGTAIQDVAAAVAVYRKAKAAGIGT
ELDLAT

Sequences:

>Translated_326_residues
MLVLTRSQIAGLLKFDEYVTVVGAAFRAHAEGCSIPPALMHVSAPDGEFHIKAGGLLTPEPYFALKSNGGFFLNRERYGM
PNIQGMVILASASDGLPLAVMDSMEITIQRTGAATAIAARYLARRDSSVVTICGCGNQGRIQLRAICHSLPIRKAFAFGL
TLEGSRAFATAMSAELKIIVEATEDLPAALRQSDVCVTCTPARKALIFAADVPRGMFLSAVGADSPDKQELDQHLLPLAG
VYGDLLEQCAQVGEFHHGIEHGLVTREDFRGELGALIAGTARGRTSADEITIYDSTGTAIQDVAAAVAVYRKAKAAGIGT
ELDLAT
>Mature_326_residues
MLVLTRSQIAGLLKFDEYVTVVGAAFRAHAEGCSIPPALMHVSAPDGEFHIKAGGLLTPEPYFALKSNGGFFLNRERYGM
PNIQGMVILASASDGLPLAVMDSMEITIQRTGAATAIAARYLARRDSSVVTICGCGNQGRIQLRAICHSLPIRKAFAFGL
TLEGSRAFATAMSAELKIIVEATEDLPAALRQSDVCVTCTPARKALIFAADVPRGMFLSAVGADSPDKQELDQHLLPLAG
VYGDLLEQCAQVGEFHHGIEHGLVTREDFRGELGALIAGTARGRTSADEITIYDSTGTAIQDVAAAVAVYRKAKAAGIGT
ELDLAT

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=233, Percent_Identity=30.4721030042918, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI62241008, Length=233, Percent_Identity=30.4721030042918, Blast_Score=98, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34476; Mature: 34476

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLTRSQIAGLLKFDEYVTVVGAAFRAHAEGCSIPPALMHVSAPDGEFHIKAGGLLTPE
CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCEEEEECCCCCCC
PYFALKSNGGFFLNRERYGMPNIQGMVILASASDGLPLAVMDSMEITIQRTGAATAIAAR
CCEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCEEEECCEEEEEEECCCHHHHHHH
YLARRDSSVVTICGCGNQGRIQLRAICHSLPIRKAFAFGLTLEGSRAFATAMSAELKIIV
HHHHCCCCEEEEEECCCCCCEEEEEHHHHCCCHHHHEEEEEECCCHHHHHHHCCEEEEEE
EATEDLPAALRQSDVCVTCTPARKALIFAADVPRGMFLSAVGADSPDKQELDQHLLPLAG
EECCHHHHHHCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH
VYGDLLEQCAQVGEFHHGIEHGLVTREDFRGELGALIAGTARGRTSADEITIYDSTGTAI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHEEEECCCCCCCCCEEEEECCCCCHH
QDVAAAVAVYRKAKAAGIGTELDLAT
HHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MLVLTRSQIAGLLKFDEYVTVVGAAFRAHAEGCSIPPALMHVSAPDGEFHIKAGGLLTPE
CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCEEEEECCCCCCC
PYFALKSNGGFFLNRERYGMPNIQGMVILASASDGLPLAVMDSMEITIQRTGAATAIAAR
CCEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCEEEECCEEEEEEECCCHHHHHHH
YLARRDSSVVTICGCGNQGRIQLRAICHSLPIRKAFAFGLTLEGSRAFATAMSAELKIIV
HHHHCCCCEEEEEECCCCCCEEEEEHHHHCCCHHHHEEEEEECCCHHHHHHHCCEEEEEE
EATEDLPAALRQSDVCVTCTPARKALIFAADVPRGMFLSAVGADSPDKQELDQHLLPLAG
EECCHHHHHHCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH
VYGDLLEQCAQVGEFHHGIEHGLVTREDFRGELGALIAGTARGRTSADEITIYDSTGTAI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHEEEECCCCCCCCCEEEEECCCCCHH
QDVAAAVAVYRKAKAAGIGTELDLAT
HHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]