Click here to switch to the map view.

The map label for this gene is 116624725

Identifier: 116624725

GI number: 116624725

Start: 7081719

End: 7082147

Strand: Direct

Name: 116624725

Synonym: Acid_5649

Alternate gene names: NA

Gene position: 7081719-7082147 (Clockwise)

Preceding gene: 116624724

Following gene: 116624730

Centisome position: 71.06

GC content: 58.28

Gene sequence:

>429_bases
ATGAAGCTGTTGGACGCAAACATCCTTTTGTACGCGGTCAACAAGGACGCACCGCTGCACCAATCCGCACGCCAATGGCT
GGAAAAGACCCTCTCCGGCGACGAGCCGCTCGGGTTCTCATGGAACGTGATTCTGGCCTTTCTGCGGCTCACGACCCGGC
CGGGTTTGTTTCGAAAGCCCTTGTCTCCGGATCAGGCCTTCGACCTGGTGGCGTCATGGCTCGCCGAACCCGCAGCCATC
ATTGTGCACGCCGGTCCGCGTCATCTGGAAATCGTCCACCGCCTTATAAAACCTCTCGGCACCGCGGGTAACCTTACTTC
AGATGCTCACCTGGGCGCTCTCGCAATCGAACAGAACGCACAATTGTGTTCTTGCGATAGCGATTTCGCACGCTTTTCGG
GCGTGGATTGGCTGAACCCGCTGGAGTAG

Upstream 100 bases:

>100_bases
ACTCGCTTGGCGCGGAACAAAACTTCCGATGGGAGAAGGCGCTGGCCATCGCCGATGCAATCGAGGACGAAGAAATTATC
CGGAAACTGGCACTGCGGAA

Downstream 100 bases:

>100_bases
CCGGCATGTCACAGGCGCGAGCGCGTGAAGCGCGGCAGGAGCATCAGAGCGGCGCCGTAGAACAGGAGTGACAGGAAGAG
CGCGGCAGTGCGGTCCTGGC

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKLLDANILLYAVNKDAPLHQSARQWLEKTLSGDEPLGFSWNVILAFLRLTTRPGLFRKPLSPDQAFDLVASWLAEPAAI
IVHAGPRHLEIVHRLIKPLGTAGNLTSDAHLGALAIEQNAQLCSCDSDFARFSGVDWLNPLE

Sequences:

>Translated_142_residues
MKLLDANILLYAVNKDAPLHQSARQWLEKTLSGDEPLGFSWNVILAFLRLTTRPGLFRKPLSPDQAFDLVASWLAEPAAI
IVHAGPRHLEIVHRLIKPLGTAGNLTSDAHLGALAIEQNAQLCSCDSDFARFSGVDWLNPLE
>Mature_142_residues
MKLLDANILLYAVNKDAPLHQSARQWLEKTLSGDEPLGFSWNVILAFLRLTTRPGLFRKPLSPDQAFDLVASWLAEPAAI
IVHAGPRHLEIVHRLIKPLGTAGNLTSDAHLGALAIEQNAQLCSCDSDFARFSGVDWLNPLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006226
- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15633; Mature: 15633

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLDANILLYAVNKDAPLHQSARQWLEKTLSGDEPLGFSWNVILAFLRLTTRPGLFRKP
CCEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
LSPDQAFDLVASWLAEPAAIIVHAGPRHLEIVHRLIKPLGTAGNLTSDAHLGALAIEQNA
CCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCC
QLCSCDSDFARFSGVDWLNPLE
CEECCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLLDANILLYAVNKDAPLHQSARQWLEKTLSGDEPLGFSWNVILAFLRLTTRPGLFRKP
CCEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
LSPDQAFDLVASWLAEPAAIIVHAGPRHLEIVHRLIKPLGTAGNLTSDAHLGALAIEQNA
CCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCC
QLCSCDSDFARFSGVDWLNPLE
CEECCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]