| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624620
Identifier: 116624620
GI number: 116624620
Start: 6947762
End: 6948304
Strand: Reverse
Name: 116624620
Synonym: Acid_5544
Alternate gene names: NA
Gene position: 6948304-6947762 (Counterclockwise)
Preceding gene: 116624621
Following gene: 116624619
Centisome position: 69.72
GC content: 60.59
Gene sequence:
>543_bases GTGCGCTACCGCCTCACGGTATTCCTCCTGTTCGCGTTTTCACTTCCGGCACAGCAGGCTCACAGCCACCTCAATGATTT CAAGCGCAAACTCATCTGGCGCGATCCGCTGATCAAGACCGCGGTCAGCGCCTTGTTCAACGAAGCAAGAAATTCGCCTC ACGAATGGGGGCGTGGTGTGGAGGGTTTTGCCAAGAGGGCCGGATCTTCTTTCGGCAAACGGGTCGTTAAATCCAGCGTG GAACTCGGCCTTAGTGAGTGGACGCACGAAGATCTTCATTACCATCGCCTAGGCGCCGGCAGTTTCATGGCGCGCGTAAA ACATGCCGTGGCGACCACCTACTGGGTGCCGCGCGACAATGGCCCAGGCTACACGCTCGCCGCCGGCCGCATCGCTGGCA CATTCACGGAATCTCAGGTCGCGCGGCTATGGATGCCTTCTCGCGTCGCCACCATGGGTGCTGCCATGCAAGGCACCGCC GCTACCGTCGGCCTGGACGTCGGCATCAATGTCTTGCGCGAATTCTGGCCTCGAGGCCGCTGA
Upstream 100 bases:
>100_bases CATGGTCACTATGTGCGTCGGGGGCGGCCAGGGTGCCGCCGGTATCTTCGAGCTCATGTAGCACAGGCTCCACTGGCAGC CTGATTGCTGTCCTTTACGC
Downstream 100 bases:
>100_bases GCAGTGTAGAATGGCGGCTTCATGCCCGCCAATGGGACTTACCTAATCTGCATTACCGTAGCGACCCTGGCCTGCCTTCT TCTCCTCATCCTGGTCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MRYRLTVFLLFAFSLPAQQAHSHLNDFKRKLIWRDPLIKTAVSALFNEARNSPHEWGRGVEGFAKRAGSSFGKRVVKSSV ELGLSEWTHEDLHYHRLGAGSFMARVKHAVATTYWVPRDNGPGYTLAAGRIAGTFTESQVARLWMPSRVATMGAAMQGTA ATVGLDVGINVLREFWPRGR
Sequences:
>Translated_180_residues MRYRLTVFLLFAFSLPAQQAHSHLNDFKRKLIWRDPLIKTAVSALFNEARNSPHEWGRGVEGFAKRAGSSFGKRVVKSSV ELGLSEWTHEDLHYHRLGAGSFMARVKHAVATTYWVPRDNGPGYTLAAGRIAGTFTESQVARLWMPSRVATMGAAMQGTA ATVGLDVGINVLREFWPRGR >Mature_180_residues MRYRLTVFLLFAFSLPAQQAHSHLNDFKRKLIWRDPLIKTAVSALFNEARNSPHEWGRGVEGFAKRAGSSFGKRVVKSSV ELGLSEWTHEDLHYHRLGAGSFMARVKHAVATTYWVPRDNGPGYTLAAGRIAGTFTESQVARLWMPSRVATMGAAMQGTA ATVGLDVGINVLREFWPRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20070; Mature: 20070
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRLTVFLLFAFSLPAQQAHSHLNDFKRKLIWRDPLIKTAVSALFNEARNSPHEWGRGV CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCH EGFAKRAGSSFGKRVVKSSVELGLSEWTHEDLHYHRLGAGSFMARVKHAVATTYWVPRDN HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCC GPGYTLAAGRIAGTFTESQVARLWMPSRVATMGAAMQGTAATVGLDVGINVLREFWPRGR CCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRYRLTVFLLFAFSLPAQQAHSHLNDFKRKLIWRDPLIKTAVSALFNEARNSPHEWGRGV CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCH EGFAKRAGSSFGKRVVKSSVELGLSEWTHEDLHYHRLGAGSFMARVKHAVATTYWVPRDN HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCC GPGYTLAAGRIAGTFTESQVARLWMPSRVATMGAAMQGTAATVGLDVGINVLREFWPRGR CCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA