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The map label for this gene is ylbK [H]

Identifier: 116624496

GI number: 116624496

Start: 6787721

End: 6788623

Strand: Direct

Name: ylbK [H]

Synonym: Acid_5420

Alternate gene names: 116624496

Gene position: 6787721-6788623 (Clockwise)

Preceding gene: 116624489

Following gene: 116624498

Centisome position: 68.11

GC content: 62.79

Gene sequence:

>903_bases
ATGAGAGCCCTGCGGCAAGCCCGCAACTTTGTTTCCGTCCTGCGACGGGTATCCGGCGCGCGAATCCGTTCCAGTGAAAA
CGTGAGAATCGGACTCGCGCTGGGAGGAGGTTTTGCGCGGGGTATCGCGCATACCGGCGTATTGAACGTCTTTCAGCGCG
AGGGAATCCCGATTCATTGCATCACGGGGGTCAGTTCGGGATCCATTGTAGCTGGGGCATTTGCCAGCGGAGCCGCGCCG
GACGAGATTGCACGCGCCGGGTGCGCGATGCGCTTTGGCGATATCGCATGCTGGCGGCTGTGCCGCATGGGCCTTGCAGC
CAGCGAGCGCATGGCGAATTTTCTGGAGCGATTGCTGAAGCGTCACCGTTTTGAACACATGGCGATGCCGCTCGGAATTC
TCGCCACCGATCTCGGCACTGGTGAATCCGTGACATTCCGCGATTCCGGCGACGTGTTCCTGCCAATTCGCGCGAGCTGC
TCCTATCCGGGCCTGTTTCAACCGGTGCGATGGGAAGGCCGTTTGCTGGTGGATGGCGCCATGACGATGGAGATTCCGGC
GCTGCTGGCGCGGCAGCTCGGCGCCACTCACGTGATCTCGGTCCACCTTCCGGTTGAGCCCGGCGGCGTCCCGCCCTCGA
ACGTTTTCCAGGTAGTGAATCGCTGCTTTCAAATTTTGCAGACGCAAACCGAGGACGGGTGGCGGCGGTACAGCGACCTG
GTGATCGCGCCCGATGTGCGCACCGTGGATTGGGACGGCTTCGAATGCGGGCCGAACCTGATCAAGGCCGGGGAAGCCGT
GGCAGAGGCCGCGCTGCCTACGATCCGGCGATGGTTTCCTCAGGCGCGGACGGAAGAAAAGGAGCTACCGCCCGAGGTCG
CGCCGGATTCGTTGATCGCGTGA

Upstream 100 bases:

>100_bases
CACTGAAACATGGCACTCCTCTTGCTCGTCTCTGAAGTAAGAGGTCGCGGCGCCAGCCGCTGAACAGGCGGACACGCCGC
GGAAGGTTAAGGAGGGGTTT

Downstream 100 bases:

>100_bases
ACCCAAGGTCGTCGGATGACCCGGGTTCAGATCGAGGGTTCGTGGTTTACTTTGACCACTTCGATTCGACTGATGTCGGC
CTCCCGCAACTGCGGTAGCA

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRALRQARNFVSVLRRVSGARIRSSENVRIGLALGGGFARGIAHTGVLNVFQREGIPIHCITGVSSGSIVAGAFASGAAP
DEIARAGCAMRFGDIACWRLCRMGLAASERMANFLERLLKRHRFEHMAMPLGILATDLGTGESVTFRDSGDVFLPIRASC
SYPGLFQPVRWEGRLLVDGAMTMEIPALLARQLGATHVISVHLPVEPGGVPPSNVFQVVNRCFQILQTQTEDGWRRYSDL
VIAPDVRTVDWDGFECGPNLIKAGEAVAEAALPTIRRWFPQARTEEKELPPEVAPDSLIA

Sequences:

>Translated_300_residues
MRALRQARNFVSVLRRVSGARIRSSENVRIGLALGGGFARGIAHTGVLNVFQREGIPIHCITGVSSGSIVAGAFASGAAP
DEIARAGCAMRFGDIACWRLCRMGLAASERMANFLERLLKRHRFEHMAMPLGILATDLGTGESVTFRDSGDVFLPIRASC
SYPGLFQPVRWEGRLLVDGAMTMEIPALLARQLGATHVISVHLPVEPGGVPPSNVFQVVNRCFQILQTQTEDGWRRYSDL
VIAPDVRTVDWDGFECGPNLIKAGEAVAEAALPTIRRWFPQARTEEKELPPEVAPDSLIA
>Mature_300_residues
MRALRQARNFVSVLRRVSGARIRSSENVRIGLALGGGFARGIAHTGVLNVFQREGIPIHCITGVSSGSIVAGAFASGAAP
DEIARAGCAMRFGDIACWRLCRMGLAASERMANFLERLLKRHRFEHMAMPLGILATDLGTGESVTFRDSGDVFLPIRASC
SYPGLFQPVRWEGRLLVDGAMTMEIPALLARQLGATHVISVHLPVEPGGVPPSNVFQVVNRCFQILQTQTEDGWRRYSDL
VIAPDVRTVDWDGFECGPNLIKAGEAVAEAALPTIRRWFPQARTEEKELPPEVAPDSLIA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI226510936, Length=212, Percent_Identity=36.3207547169811, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32642; Mature: 32642

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALRQARNFVSVLRRVSGARIRSSENVRIGLALGGGFARGIAHTGVLNVFQREGIPIHC
CHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEE
ITGVSSGSIVAGAFASGAAPDEIARAGCAMRFGDIACWRLCRMGLAASERMANFLERLLK
EECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RHRFEHMAMPLGILATDLGTGESVTFRDSGDVFLPIRASCSYPGLFQPVRWEGRLLVDGA
HHHHHHHHCCHHHHEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCC
MTMEIPALLARQLGATHVISVHLPVEPGGVPPSNVFQVVNRCFQILQTQTEDGWRRYSDL
HHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCE
VIAPDVRTVDWDGFECGPNLIKAGEAVAEAALPTIRRWFPQARTEEKELPPEVAPDSLIA
EECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHCCC
>Mature Secondary Structure
MRALRQARNFVSVLRRVSGARIRSSENVRIGLALGGGFARGIAHTGVLNVFQREGIPIHC
CHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEE
ITGVSSGSIVAGAFASGAAPDEIARAGCAMRFGDIACWRLCRMGLAASERMANFLERLLK
EECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RHRFEHMAMPLGILATDLGTGESVTFRDSGDVFLPIRASCSYPGLFQPVRWEGRLLVDGA
HHHHHHHHCCHHHHEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCC
MTMEIPALLARQLGATHVISVHLPVEPGGVPPSNVFQVVNRCFQILQTQTEDGWRRYSDL
HHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCE
VIAPDVRTVDWDGFECGPNLIKAGEAVAEAALPTIRRWFPQARTEEKELPPEVAPDSLIA
EECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]