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The map label for this gene is yfeW [C]

Identifier: 116624372

GI number: 116624372

Start: 6633102

End: 6634418

Strand: Direct

Name: yfeW [C]

Synonym: Acid_5293

Alternate gene names: 116624372

Gene position: 6633102-6634418 (Clockwise)

Preceding gene: 116624370

Following gene: 116624379

Centisome position: 66.56

GC content: 62.11

Gene sequence:

>1317_bases
ATGCAATCCACCGTGCGCCGCCACACCAGCACCTGCAATACTCTTGCGCTCCTGGCGCTTATTGTTTCCCCGAGCTTCAC
GTTCGCCCAGTCAACCAACCCGAAGCCCGAGTCGCTGGGGTTCTCCTCGGAACGGCTGGGCCGGCTGCACGACGCCATGC
AGCGCCCTGTTGACGAGAAGGCCCTGGCCGGCGTGGTCACGTTGTTGATGCGCCACGGCAAACTGGTAGAGCAACGTTCT
TACGGGGTGAAGGACATGGCATCCGGCGCCCCCATGACCAACGACACGATCTTTCGCATCTACTCCATGACCAAGCCGGT
CACGGGTGTGGCCATGATGATGCTCTACGAGGAGGGCAAGTGGCATCCGACGGACCCGATCTCGAAGTTCGTCCCCGAGC
TCGCGGACGTGAGAGTATTCAAAGAGGTGGATGCCAAGGGCGCGACGATCACCGAGCCGCCGGTGCATCCGCCCACCATG
GCGGAACTGCTCACGCACACCGCCGGTTTCACCTACGGGCTGTTCGGCTCGACTTCGATCGACAAACAGTACCTAGCGCG
AAACTGCTTCGGGGCTGCCAATCTGCACGCCATGACGCAGTGCTTCGCGGGCATACCGCTGCTTTTCCAGCCTGGGTCGA
AGTGGGTATACAGCGTGTCGATGGACATCCAGGGCTACATCATCGAGAAGCTCTCCGGGAAGCCTCTGGCCGAGTTCCTG
GAAGAACGGATCTTCAAGCCACTTCGCATGCCGGATACCGCATTCTTCGTGCCGAAAGCCAAGCGCGACCGCTTTGCCTC
GCTCTACGCCGCAGCCCCGGATGGGAAATTGGCCGTGACCGGGGAAGCGTCCGGCCCGAAGGCGGATTTCGTTTCGCCGC
CGGGAGCACCCTCGGGAGGAGGCGGCCTGGTTTCGACGGCGAGCGACTACGCGCGTTTCGCCCAGATGCTGCTCAACCAC
GGTGAACTCGATGGCGCCCGCATTCTTTCACCGGCCTCCGTGGACCTGATGACTTCCAATCACCTGTCGCCCCACTTGCT
GACGGGTGAGTTTTCGATCGGCAAAGCGGTGATGCGGCCGGGACACGGATGGGGCTACGACTTGGCCGTGTACAATGATC
CGCCGGCCGCTGACGAGATCGTGGGCAAGGGCACATTCTACTGGGAAGGAGCCGCGGCCACGTGGTTCTGGGTCGATCCC
GTCAACGATCTCGTCTTCGTCGGAATGACCCAGAGGATGTTCGGCAACGGCCAACCGCCGATGCACCATTTCAGCCGCCC
CACCGTATACGGAGCACTGATCGATCCCCGGAAGTAG

Upstream 100 bases:

>100_bases
ATTGTTGGCTGCATGGAACTCCCGAACCGGCACCGGAGTTTTTCATTCTACGTCGAAACCGGCTTCAAGACAGTGACCTG
CCTTGGAGTATCATCGTGGC

Downstream 100 bases:

>100_bases
CCTGACCGATCTTAACGAACCGACGTCCACACGCCGTGAATCGCCGAAACGATCGCATCGGGGCGATCCTGCGGCATGTC
GTGAGTGCTGTCCGGCACCA

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MQSTVRRHTSTCNTLALLALIVSPSFTFAQSTNPKPESLGFSSERLGRLHDAMQRPVDEKALAGVVTLLMRHGKLVEQRS
YGVKDMASGAPMTNDTIFRIYSMTKPVTGVAMMMLYEEGKWHPTDPISKFVPELADVRVFKEVDAKGATITEPPVHPPTM
AELLTHTAGFTYGLFGSTSIDKQYLARNCFGAANLHAMTQCFAGIPLLFQPGSKWVYSVSMDIQGYIIEKLSGKPLAEFL
EERIFKPLRMPDTAFFVPKAKRDRFASLYAAAPDGKLAVTGEASGPKADFVSPPGAPSGGGGLVSTASDYARFAQMLLNH
GELDGARILSPASVDLMTSNHLSPHLLTGEFSIGKAVMRPGHGWGYDLAVYNDPPAADEIVGKGTFYWEGAAATWFWVDP
VNDLVFVGMTQRMFGNGQPPMHHFSRPTVYGALIDPRK

Sequences:

>Translated_438_residues
MQSTVRRHTSTCNTLALLALIVSPSFTFAQSTNPKPESLGFSSERLGRLHDAMQRPVDEKALAGVVTLLMRHGKLVEQRS
YGVKDMASGAPMTNDTIFRIYSMTKPVTGVAMMMLYEEGKWHPTDPISKFVPELADVRVFKEVDAKGATITEPPVHPPTM
AELLTHTAGFTYGLFGSTSIDKQYLARNCFGAANLHAMTQCFAGIPLLFQPGSKWVYSVSMDIQGYIIEKLSGKPLAEFL
EERIFKPLRMPDTAFFVPKAKRDRFASLYAAAPDGKLAVTGEASGPKADFVSPPGAPSGGGGLVSTASDYARFAQMLLNH
GELDGARILSPASVDLMTSNHLSPHLLTGEFSIGKAVMRPGHGWGYDLAVYNDPPAADEIVGKGTFYWEGAAATWFWVDP
VNDLVFVGMTQRMFGNGQPPMHHFSRPTVYGALIDPRK
>Mature_438_residues
MQSTVRRHTSTCNTLALLALIVSPSFTFAQSTNPKPESLGFSSERLGRLHDAMQRPVDEKALAGVVTLLMRHGKLVEQRS
YGVKDMASGAPMTNDTIFRIYSMTKPVTGVAMMMLYEEGKWHPTDPISKFVPELADVRVFKEVDAKGATITEPPVHPPTM
AELLTHTAGFTYGLFGSTSIDKQYLARNCFGAANLHAMTQCFAGIPLLFQPGSKWVYSVSMDIQGYIIEKLSGKPLAEFL
EERIFKPLRMPDTAFFVPKAKRDRFASLYAAAPDGKLAVTGEASGPKADFVSPPGAPSGGGGLVSTASDYARFAQMLLNH
GELDGARILSPASVDLMTSNHLSPHLLTGEFSIGKAVMRPGHGWGYDLAVYNDPPAADEIVGKGTFYWEGAAATWFWVDP
VNDLVFVGMTQRMFGNGQPPMHHFSRPTVYGALIDPRK

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=460, Percent_Identity=26.0869565217391, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115533026, Length=370, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 47725; Mature: 47725

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTVRRHTSTCNTLALLALIVSPSFTFAQSTNPKPESLGFSSERLGRLHDAMQRPVDEK
CCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHCCCCHH
ALAGVVTLLMRHGKLVEQRSYGVKDMASGAPMTNDTIFRIYSMTKPVTGVAMMMLYEEGK
HHHHHHHHHHHCCHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC
WHPTDPISKFVPELADVRVFKEVDAKGATITEPPVHPPTMAELLTHTAGFTYGLFGSTSI
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCEEECCCCCCC
DKQYLARNCFGAANLHAMTQCFAGIPLLFQPGSKWVYSVSMDIQGYIIEKLSGKPLAEFL
CHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHH
EERIFKPLRMPDTAFFVPKAKRDRFASLYAAAPDGKLAVTGEASGPKADFVSPPGAPSGG
HHHHCCCCCCCCCEEECCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
GGLVSTASDYARFAQMLLNHGELDGARILSPASVDLMTSNHLSPHLLTGEFSIGKAVMRP
CCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCEEEECCCHHHHHHHCC
GHGWGYDLAVYNDPPAADEIVGKGTFYWEGAAATWFWVDPVNDLVFVGMTQRMFGNGQPP
CCCCCEEEEEECCCCCHHHHHCCCCEEECCCCEEEEEECCCCCEEEECCHHHHHCCCCCC
MHHFSRPTVYGALIDPRK
HHHCCCCEEEEEECCCCC
>Mature Secondary Structure
MQSTVRRHTSTCNTLALLALIVSPSFTFAQSTNPKPESLGFSSERLGRLHDAMQRPVDEK
CCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHCCCCHH
ALAGVVTLLMRHGKLVEQRSYGVKDMASGAPMTNDTIFRIYSMTKPVTGVAMMMLYEEGK
HHHHHHHHHHHCCHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC
WHPTDPISKFVPELADVRVFKEVDAKGATITEPPVHPPTMAELLTHTAGFTYGLFGSTSI
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCEEECCCCCCC
DKQYLARNCFGAANLHAMTQCFAGIPLLFQPGSKWVYSVSMDIQGYIIEKLSGKPLAEFL
CHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHH
EERIFKPLRMPDTAFFVPKAKRDRFASLYAAAPDGKLAVTGEASGPKADFVSPPGAPSGG
HHHHCCCCCCCCCEEECCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
GGLVSTASDYARFAQMLLNHGELDGARILSPASVDLMTSNHLSPHLLTGEFSIGKAVMRP
CCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCEEEECCCHHHHHHHCC
GHGWGYDLAVYNDPPAADEIVGKGTFYWEGAAATWFWVDPVNDLVFVGMTQRMFGNGQPP
CCCCCEEEEEECCCCCHHHHHCCCCEEECCCCEEEEEECCCCCEEEECCHHHHHCCCCCC
MHHFSRPTVYGALIDPRK
HHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]