| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is cya3 [H]
Identifier: 116624120
GI number: 116624120
Start: 6357032
End: 6358882
Strand: Reverse
Name: cya3 [H]
Synonym: Acid_5036
Alternate gene names: 116624120
Gene position: 6358882-6357032 (Counterclockwise)
Preceding gene: 116624122
Following gene: 116624115
Centisome position: 63.81
GC content: 61.43
Gene sequence:
>1851_bases ATGACGCCGAATCGATTGATCGCGACGGACACTGTCGCGGGCCAGGAAAGTCCCCAATCCGGCGAACCGCAGGCTTACGG TTTCGGCCCGTTCCGGGTGCTGCCGTGCGAACGCGTGCTGCGTCGCGGCGACCAGACTCTCCCACTCCCTCCGAAGGCTT TCGAGACGCTGCTGCTATTGGTGCGCAATCCCGGCCATCTGATGCGGAAAGGGGAGATGATGAAGGCGTTGTGGCCGGAT AGCTTTGTGGAAGAGGTCAATTTGGCCAACAATATCTCCCTAGTGCGAAAAACGCTGGGCGATAGTGCGGGCGATTGCGG CTACATACAGACGGTTCCGAAGCTCGGATATCGGTTTCTTCCCGCGGTGACCGGCGTTTGGGGTAAGGGTCCACCTACCG CAGATTCCGCTCGTTTGGAGCGGCAGCCGGCCGAACGAGTTGTACGCTTTCTTGCGCTTCCGTTTCGCATGCTCCTCGGC GACGAGCGGATCGACTTCCTTGGACGCAGTTTACCGGAGGCTATCTCGGCATCGCTCGCCGGACTGAGTTGCATGACGGT GCGCTCGAGCCTGCTGGCAGCGCAATTTTCCGAGAGCCGGCCAGATCCGCGGCGGATCGCGCGGGAGGCGGAGGTGGACC TGGTACTGGCGGGCACGATTCTGTGCGAGCACGACCAGGTGCGGGTCAACACGGAATTGGTGCAGGCTCCCACCGGAACA CTGCTGTTTTCCTACTCTTGCGAAGCGAAGCGCGACAACATCTTCGAGATTCAGGACATCCTGGTGGACAAGATTGTGGA AGCCCTGATGTTGCGATTGACGGAACGCGAACGAAGAACGCTGAAGCACGATGTGCCCGGCTCGGCGAGAGCCTACGAGT TCTACCTGCGAGCGAATCACGTAGCGCGGGAGCGTTCCGTGGAGAATCTGGCGCTGGCGCGCGACCTCTACCGCGAATGC GTGGACGAAGACCCGAACTACGCTCCTGCATGGGCTCGTCTGGGCCGTTGCTACCGTTTCCTGGAGAAGTTTGGAGAGGA CGGTCCACAGAGCCTGGAGTTGGCCCAGTGGGCCTTTCATAGGGCATTTGCACTGAATCCCGACCTTTCCATCGCGCACA ATCTCTACACGCAGATCGAAGCCGATTTAGGCGATGCGCAAGGGGCGATGGTGCGTCTGCTGGAGCACTCGGAGACACAC CCGAATGATCCCGAGCTGTTTGCAGGACTGGTGCAGGCCTGCCGCTTCTGCGGACTGCTGGATGAATCCGTCTCCGCGCA TCACCGCGCACGGCGGCTGGATTCGAAAGCGGTGACTAGCGTAGCTCATACGTTCTTCTTGAAGGGTGATTACGCGCGCG CGTTGGACACGTACGGCACCGGTTCGGGCTTTTACCTGGATGCGGCGTTGCTGGCGGTAGCGGGACGCGAGCCCGAAGCC GCGGAGTTGCTGGAAAGGCGCCGCAATTCGGGTGTTCGTGCCGGATGGATGCGCGTACTGATGGAATCGCTGTTTGCACT GCTGAAGGGGAATCGCGCGGCTAGCGTCGCCGCAGTAAGACAGGCGCTTGCGCAGGTGGTAAGGGATCCTGAGCTGAAGT TCTACATGGCGAGGCACTTGGCGTACGGCGGCGAGCCCGCGGCGGCGCTGGATACGATCCACGAGTTGGAAGCCGAGGGC TTCACGTGCTCGCTGGCGATGCGGAACGATCCGTGGCTGCGATCCCTGCGTTCGGTCGCCGGGTATGCGCGAGTTGTGGA TGCAGTGCTGAGTCGTGAAGAAGCAGCGCGAACATCGTTCATCGGGGCGGACGGCTGGGTGGTATTAGGTGCGGTGCCGG CGAACACATAG
Upstream 100 bases:
>100_bases CCGAAATACGGAATTCGATTTACGAAAACAGTATGCGTGTCGTGATCTGAGTAAGTCTTAAGGAAGGTTCAGGGATTTCT CAGGGAAGTCTCATTCCGCC
Downstream 100 bases:
>100_bases GAGCGACCGTGCGCAGTGCAACTTCGCGATCTCCCGTTCTACTGGACTTTGCGCGCCGACACAGGGCCGAGCAGTAACTC CTTAGGCGCGCCAGACGCAT
Product: transcriptional regulator CadC
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MTPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLLVRNPGHLMRKGEMMKALWPD SFVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFLPAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLG DERIDFLGRSLPEAISASLAGLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGT LLFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANHVARERSVENLALARDLYREC VDEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFHRAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETH PNDPELFAGLVQACRFCGLLDESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEA AELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHLAYGGEPAAALDTIHELEAEG FTCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSFIGADGWVVLGAVPANT
Sequences:
>Translated_616_residues MTPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLLVRNPGHLMRKGEMMKALWPD SFVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFLPAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLG DERIDFLGRSLPEAISASLAGLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGT LLFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANHVARERSVENLALARDLYREC VDEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFHRAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETH PNDPELFAGLVQACRFCGLLDESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEA AELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHLAYGGEPAAALDTIHELEAEG FTCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSFIGADGWVVLGAVPANT >Mature_615_residues TPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLLVRNPGHLMRKGEMMKALWPDS FVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFLPAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLGD ERIDFLGRSLPEAISASLAGLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGTL LFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANHVARERSVENLALARDLYRECV DEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFHRAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETHP NDPELFAGLVQACRFCGLLDESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEAA ELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHLAYGGEPAAALDTIHELEAEGF TCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSFIGADGWVVLGAVPANT
Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]
COG id: COG3710
COG function: function code K; DNA-binding winged-HTH domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 68219; Mature: 68087
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLL CCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCHHHHHHHHHH VRNPGHLMRKGEMMKALWPDSFVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFL HCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH PAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLGDERIDFLGRSLPEAISASLA HHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGT CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEEECCCCEEECHHHHCCCCCC LLFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANH EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHH VARERSVENLALARDLYRECVDEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFH HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETHPNDPELFAGLVQACRFCGLL HHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH DESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH AELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH AYGGEPAAALDTIHELEAEGFTCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSF HCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IGADGWVVLGAVPANT ECCCCEEEEEECCCCC >Mature Secondary Structure TPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLL CCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCHHHHHHHHHH VRNPGHLMRKGEMMKALWPDSFVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFL HCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH PAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLGDERIDFLGRSLPEAISASLA HHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGT CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEEECCCCEEECHHHHCCCCCC LLFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANH EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHH VARERSVENLALARDLYRECVDEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFH HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETHPNDPELFAGLVQACRFCGLL HHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH DESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH AELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH AYGGEPAAALDTIHELEAEGFTCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSF HCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IGADGWVVLGAVPANT ECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]