Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is cya3 [H]

Identifier: 116624120

GI number: 116624120

Start: 6357032

End: 6358882

Strand: Reverse

Name: cya3 [H]

Synonym: Acid_5036

Alternate gene names: 116624120

Gene position: 6358882-6357032 (Counterclockwise)

Preceding gene: 116624122

Following gene: 116624115

Centisome position: 63.81

GC content: 61.43

Gene sequence:

>1851_bases
ATGACGCCGAATCGATTGATCGCGACGGACACTGTCGCGGGCCAGGAAAGTCCCCAATCCGGCGAACCGCAGGCTTACGG
TTTCGGCCCGTTCCGGGTGCTGCCGTGCGAACGCGTGCTGCGTCGCGGCGACCAGACTCTCCCACTCCCTCCGAAGGCTT
TCGAGACGCTGCTGCTATTGGTGCGCAATCCCGGCCATCTGATGCGGAAAGGGGAGATGATGAAGGCGTTGTGGCCGGAT
AGCTTTGTGGAAGAGGTCAATTTGGCCAACAATATCTCCCTAGTGCGAAAAACGCTGGGCGATAGTGCGGGCGATTGCGG
CTACATACAGACGGTTCCGAAGCTCGGATATCGGTTTCTTCCCGCGGTGACCGGCGTTTGGGGTAAGGGTCCACCTACCG
CAGATTCCGCTCGTTTGGAGCGGCAGCCGGCCGAACGAGTTGTACGCTTTCTTGCGCTTCCGTTTCGCATGCTCCTCGGC
GACGAGCGGATCGACTTCCTTGGACGCAGTTTACCGGAGGCTATCTCGGCATCGCTCGCCGGACTGAGTTGCATGACGGT
GCGCTCGAGCCTGCTGGCAGCGCAATTTTCCGAGAGCCGGCCAGATCCGCGGCGGATCGCGCGGGAGGCGGAGGTGGACC
TGGTACTGGCGGGCACGATTCTGTGCGAGCACGACCAGGTGCGGGTCAACACGGAATTGGTGCAGGCTCCCACCGGAACA
CTGCTGTTTTCCTACTCTTGCGAAGCGAAGCGCGACAACATCTTCGAGATTCAGGACATCCTGGTGGACAAGATTGTGGA
AGCCCTGATGTTGCGATTGACGGAACGCGAACGAAGAACGCTGAAGCACGATGTGCCCGGCTCGGCGAGAGCCTACGAGT
TCTACCTGCGAGCGAATCACGTAGCGCGGGAGCGTTCCGTGGAGAATCTGGCGCTGGCGCGCGACCTCTACCGCGAATGC
GTGGACGAAGACCCGAACTACGCTCCTGCATGGGCTCGTCTGGGCCGTTGCTACCGTTTCCTGGAGAAGTTTGGAGAGGA
CGGTCCACAGAGCCTGGAGTTGGCCCAGTGGGCCTTTCATAGGGCATTTGCACTGAATCCCGACCTTTCCATCGCGCACA
ATCTCTACACGCAGATCGAAGCCGATTTAGGCGATGCGCAAGGGGCGATGGTGCGTCTGCTGGAGCACTCGGAGACACAC
CCGAATGATCCCGAGCTGTTTGCAGGACTGGTGCAGGCCTGCCGCTTCTGCGGACTGCTGGATGAATCCGTCTCCGCGCA
TCACCGCGCACGGCGGCTGGATTCGAAAGCGGTGACTAGCGTAGCTCATACGTTCTTCTTGAAGGGTGATTACGCGCGCG
CGTTGGACACGTACGGCACCGGTTCGGGCTTTTACCTGGATGCGGCGTTGCTGGCGGTAGCGGGACGCGAGCCCGAAGCC
GCGGAGTTGCTGGAAAGGCGCCGCAATTCGGGTGTTCGTGCCGGATGGATGCGCGTACTGATGGAATCGCTGTTTGCACT
GCTGAAGGGGAATCGCGCGGCTAGCGTCGCCGCAGTAAGACAGGCGCTTGCGCAGGTGGTAAGGGATCCTGAGCTGAAGT
TCTACATGGCGAGGCACTTGGCGTACGGCGGCGAGCCCGCGGCGGCGCTGGATACGATCCACGAGTTGGAAGCCGAGGGC
TTCACGTGCTCGCTGGCGATGCGGAACGATCCGTGGCTGCGATCCCTGCGTTCGGTCGCCGGGTATGCGCGAGTTGTGGA
TGCAGTGCTGAGTCGTGAAGAAGCAGCGCGAACATCGTTCATCGGGGCGGACGGCTGGGTGGTATTAGGTGCGGTGCCGG
CGAACACATAG

Upstream 100 bases:

>100_bases
CCGAAATACGGAATTCGATTTACGAAAACAGTATGCGTGTCGTGATCTGAGTAAGTCTTAAGGAAGGTTCAGGGATTTCT
CAGGGAAGTCTCATTCCGCC

Downstream 100 bases:

>100_bases
GAGCGACCGTGCGCAGTGCAACTTCGCGATCTCCCGTTCTACTGGACTTTGCGCGCCGACACAGGGCCGAGCAGTAACTC
CTTAGGCGCGCCAGACGCAT

Product: transcriptional regulator CadC

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MTPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLLVRNPGHLMRKGEMMKALWPD
SFVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFLPAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLG
DERIDFLGRSLPEAISASLAGLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGT
LLFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANHVARERSVENLALARDLYREC
VDEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFHRAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETH
PNDPELFAGLVQACRFCGLLDESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEA
AELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHLAYGGEPAAALDTIHELEAEG
FTCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSFIGADGWVVLGAVPANT

Sequences:

>Translated_616_residues
MTPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLLVRNPGHLMRKGEMMKALWPD
SFVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFLPAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLG
DERIDFLGRSLPEAISASLAGLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGT
LLFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANHVARERSVENLALARDLYREC
VDEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFHRAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETH
PNDPELFAGLVQACRFCGLLDESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEA
AELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHLAYGGEPAAALDTIHELEAEG
FTCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSFIGADGWVVLGAVPANT
>Mature_615_residues
TPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLLVRNPGHLMRKGEMMKALWPDS
FVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFLPAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLGD
ERIDFLGRSLPEAISASLAGLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGTL
LFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANHVARERSVENLALARDLYRECV
DEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFHRAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETHP
NDPELFAGLVQACRFCGLLDESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEAA
ELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHLAYGGEPAAALDTIHELEAEGF
TCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSFIGADGWVVLGAVPANT

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 68219; Mature: 68087

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLL
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCHHHHHHHHHH
VRNPGHLMRKGEMMKALWPDSFVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFL
HCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
PAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLGDERIDFLGRSLPEAISASLA
HHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGT
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEEECCCCEEECHHHHCCCCCC
LLFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANH
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHH
VARERSVENLALARDLYRECVDEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETHPNDPELFAGLVQACRFCGLL
HHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
DESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH
AELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AYGGEPAAALDTIHELEAEGFTCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSF
HCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
IGADGWVVLGAVPANT
ECCCCEEEEEECCCCC
>Mature Secondary Structure 
TPNRLIATDTVAGQESPQSGEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLL
CCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCHHHHHHHHHH
VRNPGHLMRKGEMMKALWPDSFVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFL
HCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
PAVTGVWGKGPPTADSARLERQPAERVVRFLALPFRMLLGDERIDFLGRSLPEAISASLA
HHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GLSCMTVRSSLLAAQFSESRPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGT
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEEECCCCEEECHHHHCCCCCC
LLFSYSCEAKRDNIFEIQDILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANH
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHH
VARERSVENLALARDLYRECVDEDPNYAPAWARLGRCYRFLEKFGEDGPQSLELAQWAFH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RAFALNPDLSIAHNLYTQIEADLGDAQGAMVRLLEHSETHPNDPELFAGLVQACRFCGLL
HHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
DESVSAHHRARRLDSKAVTSVAHTFFLKGDYARALDTYGTGSGFYLDAALLAVAGREPEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH
AELLERRRNSGVRAGWMRVLMESLFALLKGNRAASVAAVRQALAQVVRDPELKFYMARHL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AYGGEPAAALDTIHELEAEGFTCSLAMRNDPWLRSLRSVAGYARVVDAVLSREEAARTSF
HCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
IGADGWVVLGAVPANT
ECCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]