| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is qheDH [H]
Identifier: 116624095
GI number: 116624095
Start: 6323846
End: 6325639
Strand: Direct
Name: qheDH [H]
Synonym: Acid_5010
Alternate gene names: 116624095
Gene position: 6323846-6325639 (Clockwise)
Preceding gene: 116624090
Following gene: 116624096
Centisome position: 63.46
GC content: 66.16
Gene sequence:
>1794_bases ATGCATGTGATCAAGGGTTTCCGGGTATTCCCCCTCTTGGCGGCCCTTCTCGTTCTCCGCTCGGCGATGGCCGCGCCGGA TGCCAGGAAACTCTTTCGCGACCACTGCGCCGGCTGCCATGGCGCCGACGCTCGCGGCAGCGGCAAGGCTCCGGGCCTCG AAGGCAGCCCTCATCTCAGCGGCCAGTCCGTGCAGCAATTACAGGAAATCATCCGCGCCGGCTTCCCCGCCACCGGCATG CCCCCGTTCGACCTGCCCGCTGACGATCTCACCGCGCTCGCGTCCTTCCTCCGCGGCCTCAACGCCGGCGCCACCATCCT CCCCGCGGCCGGCAGACGCGTAGCCTGGGGCCCGCCCGAACCCGGCGATTGGCTCACCTACAACGGAGACCTCAGCGCCA ATCGCTATAGCAGCCTGAAGCAGATCAATCGCACCAACGCCGCCGGCCTCCGGCTCAAATGGATCTTCCCTCTGCCTTAC TACGCCCTCGAAACCACGCCCCTCGAGTCCGGGGGAGTCATGTACGTGACCGGTCCCAACCAGGTCTACGCCATCGACGC CCTCAACGGAAGTCAGCTTTGGAAGTACTCGCGCCCCCAGACTCGCGGACTGGTCGGCGATTCCGCCCTCGGTACCAATC GCGGAGTCGCCATCCACGAGGGCAAAGTCTTCTTCCAGACCGATAACGCCCACCTGCTCGCGCTCGACCGCGCCACCGGC GAACTGCTCTGGGAGAAAGCCATGCCCGAGGAACCCAACCCGAACTACGGCGGCACGATGGCGCCACTCATCGTCGGCGA TACCGTGATCGCCGGTGTCGCGGGCGCCGACCACGGCATCCGCGGCTTCATCGCCTGCTACAAAGCCGAGACCGGCGCCC TGCTCTGGCGCCACTGGACCGTCCCCCGCAAAGGCGAGCCCGGTTCAGAGACCTGGCAGGGCAGTGAGCCCCTCCGCGGC GGCGGTTCCACCTGGCTCACCGGTTCCTACGACCCCTCGACCGACACACTCTACTGGCCCACCGGCAACCCCTGGCCCGA CGGCGACGATCGCGATCGCCCCGGCGACAACCTCTATACCAACTGCATCCTTGCCCTCAACCCCCACACCGGCGAACTCA AGTGGCACTATCAGTTCACGCCGCACGATGTCAAGGATCGCGACGCCACCGAGCCCCCCGTCCTGGTTGACACCACTTAC TGCGGCACGCCTCGCAAGTTACTCCTCCATGCCGACCGCAATGGCTTCTTCTACGTGCTGGACCGGACCACCGGCGAATT ACTCCTGACCAAGCCCTTCCTCCGCCGCGTCGATTGGGCCACGGAAATCGCACCCGATGGCCGCCCCGTAGTGATCGCTC CCCGCGGCTGCCCCAGCGACGCCGCCAACTGGAGTTCGGCCGCCTTCAGCCCGGTGACCCGCCTGTTCTACTTCCTTGCC CTCGAAGAATGCACCGGCAGCCCCACCGGCTATCCCGACCAGACCGGGCAGCGCTTTCTCCGCGCCCTCAATATCGAAAC CGGAAAAATCGTTTGGGAAGTCCCGCAGCCTGAAGCCGCCAAGGCCAAGACTTGGGCCGGCGTCCTCGCCACCGCCGGCG GCGTCGTCTTCTACGGTAAACCCAACGGCGGCTTCGAAGCCGTGGACGACCGCGACGGCAAACTGCTCTGGCGCTTTGAA ACCAATGTCCGCATGAAGGCCTCGCCCATGACCTTCCAGTTCGCCGGCCGCCAGTACGTCGCCGTCGCCGCCGGTCCCAA CATCCTCTGCTTCACCGCTGATCCTCGCCCGTAA
Upstream 100 bases:
>100_bases GCAACTCCTGTGCCCGCGGCGAGAAACGTACGGCGATTTACATGTCGCATAGGCTTCTGTAGATCCTACACCGAGAAAAT CCCGTTGTATACTCGCACCG
Downstream 100 bases:
>100_bases GCCAAGCGCGCGTTTGGCGTGGAGTGCGCGGCAGGTTGTTATACTCGTATTTCCATGCATAGAGTCCGTTTTGCGCCTTC TCCCACGGGATTTCTGCACA
Product: pyrrolo-quinoline quinone
Products: NA
Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MHVIKGFRVFPLLAALLVLRSAMAAPDARKLFRDHCAGCHGADARGSGKAPGLEGSPHLSGQSVQQLQEIIRAGFPATGM PPFDLPADDLTALASFLRGLNAGATILPAAGRRVAWGPPEPGDWLTYNGDLSANRYSSLKQINRTNAAGLRLKWIFPLPY YALETTPLESGGVMYVTGPNQVYAIDALNGSQLWKYSRPQTRGLVGDSALGTNRGVAIHEGKVFFQTDNAHLLALDRATG ELLWEKAMPEEPNPNYGGTMAPLIVGDTVIAGVAGADHGIRGFIACYKAETGALLWRHWTVPRKGEPGSETWQGSEPLRG GGSTWLTGSYDPSTDTLYWPTGNPWPDGDDRDRPGDNLYTNCILALNPHTGELKWHYQFTPHDVKDRDATEPPVLVDTTY CGTPRKLLLHADRNGFFYVLDRTTGELLLTKPFLRRVDWATEIAPDGRPVVIAPRGCPSDAANWSSAAFSPVTRLFYFLA LEECTGSPTGYPDQTGQRFLRALNIETGKIVWEVPQPEAAKAKTWAGVLATAGGVVFYGKPNGGFEAVDDRDGKLLWRFE TNVRMKASPMTFQFAGRQYVAVAAGPNILCFTADPRP
Sequences:
>Translated_597_residues MHVIKGFRVFPLLAALLVLRSAMAAPDARKLFRDHCAGCHGADARGSGKAPGLEGSPHLSGQSVQQLQEIIRAGFPATGM PPFDLPADDLTALASFLRGLNAGATILPAAGRRVAWGPPEPGDWLTYNGDLSANRYSSLKQINRTNAAGLRLKWIFPLPY YALETTPLESGGVMYVTGPNQVYAIDALNGSQLWKYSRPQTRGLVGDSALGTNRGVAIHEGKVFFQTDNAHLLALDRATG ELLWEKAMPEEPNPNYGGTMAPLIVGDTVIAGVAGADHGIRGFIACYKAETGALLWRHWTVPRKGEPGSETWQGSEPLRG GGSTWLTGSYDPSTDTLYWPTGNPWPDGDDRDRPGDNLYTNCILALNPHTGELKWHYQFTPHDVKDRDATEPPVLVDTTY CGTPRKLLLHADRNGFFYVLDRTTGELLLTKPFLRRVDWATEIAPDGRPVVIAPRGCPSDAANWSSAAFSPVTRLFYFLA LEECTGSPTGYPDQTGQRFLRALNIETGKIVWEVPQPEAAKAKTWAGVLATAGGVVFYGKPNGGFEAVDDRDGKLLWRFE TNVRMKASPMTFQFAGRQYVAVAAGPNILCFTADPRP >Mature_597_residues MHVIKGFRVFPLLAALLVLRSAMAAPDARKLFRDHCAGCHGADARGSGKAPGLEGSPHLSGQSVQQLQEIIRAGFPATGM PPFDLPADDLTALASFLRGLNAGATILPAAGRRVAWGPPEPGDWLTYNGDLSANRYSSLKQINRTNAAGLRLKWIFPLPY YALETTPLESGGVMYVTGPNQVYAIDALNGSQLWKYSRPQTRGLVGDSALGTNRGVAIHEGKVFFQTDNAHLLALDRATG ELLWEKAMPEEPNPNYGGTMAPLIVGDTVIAGVAGADHGIRGFIACYKAETGALLWRHWTVPRKGEPGSETWQGSEPLRG GGSTWLTGSYDPSTDTLYWPTGNPWPDGDDRDRPGDNLYTNCILALNPHTGELKWHYQFTPHDVKDRDATEPPVLVDTTY CGTPRKLLLHADRNGFFYVLDRTTGELLLTKPFLRRVDWATEIAPDGRPVVIAPRGCPSDAANWSSAAFSPVTRLFYFLA LEECTGSPTGYPDQTGQRFLRALNIETGKIVWEVPQPEAAKAKTWAGVLATAGGVVFYGKPNGGFEAVDDRDGKLLWRFE TNVRMKASPMTFQFAGRQYVAVAAGPNILCFTADPRP
Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=351, Percent_Identity=28.2051282051282, Blast_Score=116, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.98.1 [H]
Molecular weight: Translated: 64933; Mature: 64933
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVIKGFRVFPLLAALLVLRSAMAAPDARKLFRDHCAGCHGADARGSGKAPGLEGSPHLS CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GQSVQQLQEIIRAGFPATGMPPFDLPADDLTALASFLRGLNAGATILPAAGRRVAWGPPE CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCCC PGDWLTYNGDLSANRYSSLKQINRTNAAGLRLKWIFPLPYYALETTPLESGGVMYVTGPN CCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEECCC QVYAIDALNGSQLWKYSRPQTRGLVGDSALGTNRGVAIHEGKVFFQTDNAHLLALDRATG EEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCEEEEEECCCH ELLWEKAMPEEPNPNYGGTMAPLIVGDTVIAGVAGADHGIRGFIACYKAETGALLWRHWT HHHHHHCCCCCCCCCCCCEECCEEECCHHEEECCCCCCCCEEEEEEEECCCCEEEEEEEC VPRKGEPGSETWQGSEPLRGGGSTWLTGSYDPSTDTLYWPTGNPWPDGDDRDRPGDNLYT CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEE NCILALNPHTGELKWHYQFTPHDVKDRDATEPPVLVDTTYCGTPRKLLLHADRNGFFYVL EEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEE DRTTGELLLTKPFLRRVDWATEIAPDGRPVVIAPRGCPSDAANWSSAAFSPVTRLFYFLA ECCCCCEEEECHHHHHHCHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH LEECTGSPTGYPDQTGQRFLRALNIETGKIVWEVPQPEAAKAKTWAGVLATAGGVVFYGK HHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEC PNGGFEAVDDRDGKLLWRFETNVRMKASPMTFQFAGRQYVAVAAGPNILCFTADPRP CCCCCCCCCCCCCEEEEEEECCEEEEECCCEEEECCCEEEEEECCCCEEEEECCCCC >Mature Secondary Structure MHVIKGFRVFPLLAALLVLRSAMAAPDARKLFRDHCAGCHGADARGSGKAPGLEGSPHLS CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GQSVQQLQEIIRAGFPATGMPPFDLPADDLTALASFLRGLNAGATILPAAGRRVAWGPPE CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCCC PGDWLTYNGDLSANRYSSLKQINRTNAAGLRLKWIFPLPYYALETTPLESGGVMYVTGPN CCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEECCC QVYAIDALNGSQLWKYSRPQTRGLVGDSALGTNRGVAIHEGKVFFQTDNAHLLALDRATG EEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCEEEEEECCCH ELLWEKAMPEEPNPNYGGTMAPLIVGDTVIAGVAGADHGIRGFIACYKAETGALLWRHWT HHHHHHCCCCCCCCCCCCEECCEEECCHHEEECCCCCCCCEEEEEEEECCCCEEEEEEEC VPRKGEPGSETWQGSEPLRGGGSTWLTGSYDPSTDTLYWPTGNPWPDGDDRDRPGDNLYT CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEE NCILALNPHTGELKWHYQFTPHDVKDRDATEPPVLVDTTYCGTPRKLLLHADRNGFFYVL EEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEE DRTTGELLLTKPFLRRVDWATEIAPDGRPVVIAPRGCPSDAANWSSAAFSPVTRLFYFLA ECCCCCEEEECHHHHHHCHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH LEECTGSPTGYPDQTGQRFLRALNIETGKIVWEVPQPEAAKAKTWAGVLATAGGVVFYGK HHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEC PNGGFEAVDDRDGKLLWRFETNVRMKASPMTFQFAGRQYVAVAAGPNILCFTADPRP CCCCCCCCCCCCCEEEEEEECCEEEEECCCEEEECCCEEEEEECCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]