| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is bglX [H]
Identifier: 116624091
GI number: 116624091
Start: 6316986
End: 6318791
Strand: Reverse
Name: bglX [H]
Synonym: Acid_5006
Alternate gene names: 116624091
Gene position: 6318791-6316986 (Counterclockwise)
Preceding gene: 116624092
Following gene: 116624088
Centisome position: 63.41
GC content: 60.35
Gene sequence:
>1806_bases ATGAAAAAGTCTTATAGTCTTCGACTGGCCCTTGTCCCGGGTCTGATCGCGGCCGCGTGTCTTTGCTGGGCCGCCGCCAA GCCTAAATCTCTTTCCTCCTACGATCCGCAGGTCAAAGCGCTGCTGGCGCAGATGACGCTGGATGAAAAAATCGGGCAGA TGACGCAGCCCGAGCAGAACGAGCTCAAAGATCCGGCCGATGTGGAGAACTACTTCGTTGGCTCGCTGTTGAGCGGCGGC AGTTCGGATCCGAAGGAAGGCAACAGTATCGAGGCGTGGACGAATCTCTACGACCGGTTGCAAGCGCGGACGCAGAACAC GCGGTTGAAGATACCGATTCTCTACGGCATTGATGCGGTTCACGGGCACAACAATGTGCTGAATGCCGTGATCTTCCCGC ACAACGTCGGGCTGGGGTGCACGCGCAACCCGAAGCTGGTGGAGCAGGTAGAGCGGGTGACCGCGGAAGAGATTCGCGCG ACTGGGATCCAGTGGGCATTCGGGCCGTGCGTGACGGTGCCGCAGGATATTCGCTGGGGCCGCACGTACGAGGGCTTCTC GGAAGACCCGAAGCTGGTGCGCGAGCTTTCCGGACCGGCGGTGCGCGGTTTCCAGGGCAAAGATTACAGCGACCCCCTCG GCGTGTTGGCATGCGCCAAGCACTTCGTCGGCGATGGCGGCACGGCTTATGGATCGACGAAGACGGGTCTCGACCAGGGC GATACGAAGGTCGATGAAGCCACGCTGCGCAAGATCCACTTGCAGGGTTATTACTCGGCGATCGAAGCGGGAGTGGGCAC GATCATGCCGAGCTACAGCAGTTGGAATGGGGTGAAGTGCTCAGCGAGTAAGAAGCTCCTCACGGACCTGCTGAAAAATG AGATGGGGTTCGAGGGCTTTCTGATTTCCGATTACAACGCGATCGACCAGCTGGCCAAGGACTACAAAGACGCGGTGGCC ATCTCAATCAACGCCGGGATGGACATGGTGATGGTGCCGACCCGGTATCGCGAGTATTACAACGACTTGAAGGCGCTGGT GGGCGAGGGCAAGGTCCCGATGTCGCGAATTGACGATGCAGTGACACGCATCCTGCGCGTGAAGTTCGCGATGGGGCTGA TGGATCCAAAGCGTTCGCAACTGGCAGACCGCAGTCTGCAGAAGAGTTTCGGATCACCGGAGCATCGAGCCGTGGCGCGG CAGGCGGTGCGCGAATCGATGGTTCTGCTGAAGAACGATAAAAAGCTATTGCCACTATCGAAGAAGGCGGCGCGAATTCA CGTGGGCGGTAAGAACGCGGACGATCTTGGCAACCAGTGCGGCGGTTGGACGATCGACTGGCAGGGGAAGAGCGGGCCGA TTACGCCGGGTGGCACGACGATCCTGGCGGCGATTCAGGGCGCTGTCTCGAAAGATACGAAGGTCACGTTCTCAAAGGGC GGTGAGGGCGCGGCCGGCGCGGATGTGGGTGTGGTGGTGATCGGCGAGACACCGTACGCGGAAATGAAGGGCGACCGGAG CGACCTTTCGTTGGACAAGGAAGACGCGGCAGCGGTGAAGGCGATGAAGGCCACTGGGATCCCGGTAGTCGTAATCGTAG TCTCGGGGCGCCCGATGGTGCTGGGCGACGTACTTGACCAGGCCGGAGCAGTAATGGCTGCGTGGCTGCCGGGAACCGAA GGGCAGGGAGTCGCGGACGTGCTGTTCGGAGACTACAAGCCCACGGGAAAGCTCTCGTTCACATGGCCGCGTAGCAATGC GAAAGCGGACGCGGTGTTCGCTTACGGTTACGGCTTGAAGTACTGA
Upstream 100 bases:
>100_bases AAACCGTACGACGAGCGCAGTGCGGGGGTGAAAGACGGGTTCGGCAACACGTGGTGGATGGCCACCTACACCGGGGTGTA AGAGAGATATGCTTTAAGGG
Downstream 100 bases:
>100_bases CGTCTAAATTGGAAAAGCCCCGCGCCGAGGAGCGCGATGACGAACAACGCCAAGGTGGAAGGCTCGGGCGCGTCGTCGGT TGCGTCGAATATTGAAAACG
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MKKSYSLRLALVPGLIAAACLCWAAAKPKSLSSYDPQVKALLAQMTLDEKIGQMTQPEQNELKDPADVENYFVGSLLSGG SSDPKEGNSIEAWTNLYDRLQARTQNTRLKIPILYGIDAVHGHNNVLNAVIFPHNVGLGCTRNPKLVEQVERVTAEEIRA TGIQWAFGPCVTVPQDIRWGRTYEGFSEDPKLVRELSGPAVRGFQGKDYSDPLGVLACAKHFVGDGGTAYGSTKTGLDQG DTKVDEATLRKIHLQGYYSAIEAGVGTIMPSYSSWNGVKCSASKKLLTDLLKNEMGFEGFLISDYNAIDQLAKDYKDAVA ISINAGMDMVMVPTRYREYYNDLKALVGEGKVPMSRIDDAVTRILRVKFAMGLMDPKRSQLADRSLQKSFGSPEHRAVAR QAVRESMVLLKNDKKLLPLSKKAARIHVGGKNADDLGNQCGGWTIDWQGKSGPITPGGTTILAAIQGAVSKDTKVTFSKG GEGAAGADVGVVVIGETPYAEMKGDRSDLSLDKEDAAAVKAMKATGIPVVVIVVSGRPMVLGDVLDQAGAVMAAWLPGTE GQGVADVLFGDYKPTGKLSFTWPRSNAKADAVFAYGYGLKY
Sequences:
>Translated_601_residues MKKSYSLRLALVPGLIAAACLCWAAAKPKSLSSYDPQVKALLAQMTLDEKIGQMTQPEQNELKDPADVENYFVGSLLSGG SSDPKEGNSIEAWTNLYDRLQARTQNTRLKIPILYGIDAVHGHNNVLNAVIFPHNVGLGCTRNPKLVEQVERVTAEEIRA TGIQWAFGPCVTVPQDIRWGRTYEGFSEDPKLVRELSGPAVRGFQGKDYSDPLGVLACAKHFVGDGGTAYGSTKTGLDQG DTKVDEATLRKIHLQGYYSAIEAGVGTIMPSYSSWNGVKCSASKKLLTDLLKNEMGFEGFLISDYNAIDQLAKDYKDAVA ISINAGMDMVMVPTRYREYYNDLKALVGEGKVPMSRIDDAVTRILRVKFAMGLMDPKRSQLADRSLQKSFGSPEHRAVAR QAVRESMVLLKNDKKLLPLSKKAARIHVGGKNADDLGNQCGGWTIDWQGKSGPITPGGTTILAAIQGAVSKDTKVTFSKG GEGAAGADVGVVVIGETPYAEMKGDRSDLSLDKEDAAAVKAMKATGIPVVVIVVSGRPMVLGDVLDQAGAVMAAWLPGTE GQGVADVLFGDYKPTGKLSFTWPRSNAKADAVFAYGYGLKY >Mature_601_residues MKKSYSLRLALVPGLIAAACLCWAAAKPKSLSSYDPQVKALLAQMTLDEKIGQMTQPEQNELKDPADVENYFVGSLLSGG SSDPKEGNSIEAWTNLYDRLQARTQNTRLKIPILYGIDAVHGHNNVLNAVIFPHNVGLGCTRNPKLVEQVERVTAEEIRA TGIQWAFGPCVTVPQDIRWGRTYEGFSEDPKLVRELSGPAVRGFQGKDYSDPLGVLACAKHFVGDGGTAYGSTKTGLDQG DTKVDEATLRKIHLQGYYSAIEAGVGTIMPSYSSWNGVKCSASKKLLTDLLKNEMGFEGFLISDYNAIDQLAKDYKDAVA ISINAGMDMVMVPTRYREYYNDLKALVGEGKVPMSRIDDAVTRILRVKFAMGLMDPKRSQLADRSLQKSFGSPEHRAVAR QAVRESMVLLKNDKKLLPLSKKAARIHVGGKNADDLGNQCGGWTIDWQGKSGPITPGGTTILAAIQGAVSKDTKVTFSKG GEGAAGADVGVVVIGETPYAEMKGDRSDLSLDKEDAAAVKAMKATGIPVVVIVVSGRPMVLGDVLDQAGAVMAAWLPGTE GQGVADVLFGDYKPTGKLSFTWPRSNAKADAVFAYGYGLKY
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=619, Percent_Identity=32.1486268174475, Blast_Score=283, Evalue=3e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 64669; Mature: 64669
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSYSLRLALVPGLIAAACLCWAAAKPKSLSSYDPQVKALLAQMTLDEKIGQMTQPEQN CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHH ELKDPADVENYFVGSLLSGGSSDPKEGNSIEAWTNLYDRLQARTQNTRLKIPILYGIDAV HCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEE HGHNNVLNAVIFPHNVGLGCTRNPKLVEQVERVTAEEIRATGIQWAFGPCVTVPQDIRWG CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC RTYEGFSEDPKLVRELSGPAVRGFQGKDYSDPLGVLACAKHFVGDGGTAYGSTKTGLDQG CCCCCCCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DTKVDEATLRKIHLQGYYSAIEAGVGTIMPSYSSWNGVKCSASKKLLTDLLKNEMGFEGF CCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCEE LISDYNAIDQLAKDYKDAVAISINAGMDMVMVPTRYREYYNDLKALVGEGKVPMSRIDDA EECCHHHHHHHHHHHHCEEEEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHH VTRILRVKFAMGLMDPKRSQLADRSLQKSFGSPEHRAVARQAVRESMVLLKNDKKLLPLS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCC KKAARIHVGGKNADDLGNQCGGWTIDWQGKSGPITPGGTTILAAIQGAVSKDTKVTFSKG CCCEEEEECCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECC GEGAAGADVGVVVIGETPYAEMKGDRSDLSLDKEDAAAVKAMKATGIPVVVIVVSGRPMV CCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEE LGDVLDQAGAVMAAWLPGTEGQGVADVLFGDYKPTGKLSFTWPRSNAKADAVFAYGYGLK HHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEECCCCC Y C >Mature Secondary Structure MKKSYSLRLALVPGLIAAACLCWAAAKPKSLSSYDPQVKALLAQMTLDEKIGQMTQPEQN CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHH ELKDPADVENYFVGSLLSGGSSDPKEGNSIEAWTNLYDRLQARTQNTRLKIPILYGIDAV HCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEE HGHNNVLNAVIFPHNVGLGCTRNPKLVEQVERVTAEEIRATGIQWAFGPCVTVPQDIRWG CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC RTYEGFSEDPKLVRELSGPAVRGFQGKDYSDPLGVLACAKHFVGDGGTAYGSTKTGLDQG CCCCCCCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DTKVDEATLRKIHLQGYYSAIEAGVGTIMPSYSSWNGVKCSASKKLLTDLLKNEMGFEGF CCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCEE LISDYNAIDQLAKDYKDAVAISINAGMDMVMVPTRYREYYNDLKALVGEGKVPMSRIDDA EECCHHHHHHHHHHHHCEEEEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHH VTRILRVKFAMGLMDPKRSQLADRSLQKSFGSPEHRAVARQAVRESMVLLKNDKKLLPLS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCC KKAARIHVGGKNADDLGNQCGGWTIDWQGKSGPITPGGTTILAAIQGAVSKDTKVTFSKG CCCEEEEECCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECC GEGAAGADVGVVVIGETPYAEMKGDRSDLSLDKEDAAAVKAMKATGIPVVVIVVSGRPMV CCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEE LGDVLDQAGAVMAAWLPGTEGQGVADVLFGDYKPTGKLSFTWPRSNAKADAVFAYGYGLK HHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEECCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]