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The map label for this gene is 116624082

Identifier: 116624082

GI number: 116624082

Start: 6302672

End: 6303583

Strand: Direct

Name: 116624082

Synonym: Acid_4996

Alternate gene names: NA

Gene position: 6302672-6303583 (Clockwise)

Preceding gene: 116624081

Following gene: 116624083

Centisome position: 63.24

GC content: 63.16

Gene sequence:

>912_bases
GTGCGTCTTTTCCTCCCCCTGTTCCTGGCGGTAGCCGCCTTCACTCAGCCCCGCCAGGTCGCGATCACGATTGACGATCT
TCCCCGCGGCGGCGATTCCAGAGATGCGCGCGATCTTGCCTCCATACGCGCTCTCACGACGAAACTCCTCGAGCCCCTCC
GCGGCATCCCCGTCATCGGCTTCGTCAATGCCGGTCGGGCCGAACAACTCGGTGCCCCTGGGCTGCAGACCATCCTCAAA
CTCTGGCTCGACGCCGGAGCCACCCTCGGCAACCACACCTGGTCGCATCCCGACCTCAACACGACACCACTCGCCGATTA
CGAAGCCGACCTGCTCCGCGGCGAACCCGCCATTACCCAAGCGCTAGGACGCCCGCCCGTCTACTTCCGCCATCCCTTTC
TGCACGCCGGCAAGAATGCCGATACGCGCCGCGCGCTCGAGAGATTTCTCGCCGAACACCACTACCGTATCGCCCCCGTC
ACGCTCGATAACTCCGATTGGATGTTCGCCGCCGTTTACGCCCCGGCACTCAAGACCGACCCCGCGCTCGCCATCCGCGT
CCGCGAAACCTACCTCGCCTATATGGAGTCGATCTTCGACTTCTTTGAGCAGCGCACCCGTGAAGTCGTGGGCCGCGACA
TCCCGCAAACCCTGCTGATTCACGCCAGCCGCCTCAACGCGGATGCCATGCCCGCCCTCCTCGCCATGATGCGCCGCCGC
GGCTACCAGTTTGTCTCGCTCGAGGATGCCCTCAAAGACTCCGCCTACAGCCTGCCCAACGAATACTTCGGAACCGGAGG
CTTTTCCTGGATTCATCGCTGGTCGCGCACCAAGGGCATGTCCAACAAAGGCGAGCCTGATGAACCCGCCTGGATCGCGG
ATGCCTACCGGAATCTCCAAAAGGTACAATAA

Upstream 100 bases:

>100_bases
ATCGCCGCTGCCTCCACGGACCCGCGTAACATGGTCAAGAAATCAGTCGCTTGGGCTCGCCGCACCGTGACTCACCGCCT
GGCCATGTCAAACTCATAAT

Downstream 100 bases:

>100_bases
GGGGCATGAGGGTATGTCTGTGTTTGCTGGCGCTCGCGGTCTGCTCCGTTGCGGCCGAGAAGCCGAAACCCAGCGAAATC
GTCAGCGGGAAACTCATGGT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase-Related Protein; Polysaccharide Deacetylase Domain Protein; Peptidoglycan GlcNAc Deacetylase Proteins; Polysaccharide Deacetylase Family

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRLFLPLFLAVAAFTQPRQVAITIDDLPRGGDSRDARDLASIRALTTKLLEPLRGIPVIGFVNAGRAEQLGAPGLQTILK
LWLDAGATLGNHTWSHPDLNTTPLADYEADLLRGEPAITQALGRPPVYFRHPFLHAGKNADTRRALERFLAEHHYRIAPV
TLDNSDWMFAAVYAPALKTDPALAIRVRETYLAYMESIFDFFEQRTREVVGRDIPQTLLIHASRLNADAMPALLAMMRRR
GYQFVSLEDALKDSAYSLPNEYFGTGGFSWIHRWSRTKGMSNKGEPDEPAWIADAYRNLQKVQ

Sequences:

>Translated_303_residues
MRLFLPLFLAVAAFTQPRQVAITIDDLPRGGDSRDARDLASIRALTTKLLEPLRGIPVIGFVNAGRAEQLGAPGLQTILK
LWLDAGATLGNHTWSHPDLNTTPLADYEADLLRGEPAITQALGRPPVYFRHPFLHAGKNADTRRALERFLAEHHYRIAPV
TLDNSDWMFAAVYAPALKTDPALAIRVRETYLAYMESIFDFFEQRTREVVGRDIPQTLLIHASRLNADAMPALLAMMRRR
GYQFVSLEDALKDSAYSLPNEYFGTGGFSWIHRWSRTKGMSNKGEPDEPAWIADAYRNLQKVQ
>Mature_303_residues
MRLFLPLFLAVAAFTQPRQVAITIDDLPRGGDSRDARDLASIRALTTKLLEPLRGIPVIGFVNAGRAEQLGAPGLQTILK
LWLDAGATLGNHTWSHPDLNTTPLADYEADLLRGEPAITQALGRPPVYFRHPFLHAGKNADTRRALERFLAEHHYRIAPV
TLDNSDWMFAAVYAPALKTDPALAIRVRETYLAYMESIFDFFEQRTREVVGRDIPQTLLIHASRLNADAMPALLAMMRRR
GYQFVSLEDALKDSAYSLPNEYFGTGGFSWIHRWSRTKGMSNKGEPDEPAWIADAYRNLQKVQ

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34056; Mature: 34056

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFLPLFLAVAAFTQPRQVAITIDDLPRGGDSRDARDLASIRALTTKLLEPLRGIPVIG
CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
FVNAGRAEQLGAPGLQTILKLWLDAGATLGNHTWSHPDLNTTPLADYEADLLRGEPAITQ
EECCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHH
ALGRPPVYFRHPFLHAGKNADTRRALERFLAEHHYRIAPVTLDNSDWMFAAVYAPALKTD
HHCCCCCEEECCHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCC
PALAIRVRETYLAYMESIFDFFEQRTREVVGRDIPQTLLIHASRLNADAMPALLAMMRRR
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC
GYQFVSLEDALKDSAYSLPNEYFGTGGFSWIHRWSRTKGMSNKGEPDEPAWIADAYRNLQ
CCEEEEHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
KVQ
HCC
>Mature Secondary Structure
MRLFLPLFLAVAAFTQPRQVAITIDDLPRGGDSRDARDLASIRALTTKLLEPLRGIPVIG
CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
FVNAGRAEQLGAPGLQTILKLWLDAGATLGNHTWSHPDLNTTPLADYEADLLRGEPAITQ
EECCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHH
ALGRPPVYFRHPFLHAGKNADTRRALERFLAEHHYRIAPVTLDNSDWMFAAVYAPALKTD
HHCCCCCEEECCHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCC
PALAIRVRETYLAYMESIFDFFEQRTREVVGRDIPQTLLIHASRLNADAMPALLAMMRRR
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC
GYQFVSLEDALKDSAYSLPNEYFGTGGFSWIHRWSRTKGMSNKGEPDEPAWIADAYRNLQ
CCEEEEHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
KVQ
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA