| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624081
Identifier: 116624081
GI number: 116624081
Start: 6302110
End: 6302670
Strand: Direct
Name: 116624081
Synonym: Acid_4995
Alternate gene names: NA
Gene position: 6302110-6302670 (Clockwise)
Preceding gene: 116624080
Following gene: 116624082
Centisome position: 63.24
GC content: 64.35
Gene sequence:
>561_bases ATGGAAGCCCCCGAAATTCTCGCCGCTTTGCGCACGCAGGCGAACCCCGTCGACGTCGCCGGCATGGCGCGCTACGGCAT CAGCACCAATGGCACGCTCGGCGTCCCTGTGAAGGCGCTCCGCGAACTCGCCAAATCCATCGGCCGCGATCACCGCCTCG CGCTCGACCTCTGGGATTCGGGCATCCACGAGGCACGTATTCTCGCCACAATCATTGACGACCCCGCGCTCGTCACGAAA CGGCAGATGGACCGCTGGGCCCGCGACTTCGACTCCTGGGACGTCTGCGATCAGGCCTGCCAGAATCTCTTCCGCTATAC TCCGCACGCATGGGAAATGGCCGCGAAGTGGTCCGCGGCCCGCCCCGAGTTCGTCCGCCGCACCGGCTTTGCCCTGATGG CCGGCCTTGCCGTCAAATCCAAGTCCGCCCCTCGCGAATACTTCGAGTCCTTCCTTCCCCTCATCGCCGCTGCCTCCACG GACCCGCGTAACATGGTCAAGAAATCAGTCGCTTGGGCTCGCCGCACCGTGACTCACCGCCTGGCCATGTCAAACTCATA A
Upstream 100 bases:
>100_bases AGCCGGTCGCGGCAACATCGCGGACCTCAATTCCCTGCCCGCCCGCTCCGGCGCCACCGCCCCCGCCAAAGGTCTCTTTC AGGTCAGCGTGGAGTATTAA
Downstream 100 bases:
>100_bases TGTGCGTCTTTTCCTCCCCCTGTTCCTGGCGGTAGCCGCCTTCACTCAGCCCCGCCAGGTCGCGATCACGATTGACGATC TTCCCCGCGGCGGCGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MEAPEILAALRTQANPVDVAGMARYGISTNGTLGVPVKALRELAKSIGRDHRLALDLWDSGIHEARILATIIDDPALVTK RQMDRWARDFDSWDVCDQACQNLFRYTPHAWEMAAKWSAARPEFVRRTGFALMAGLAVKSKSAPREYFESFLPLIAAAST DPRNMVKKSVAWARRTVTHRLAMSNS
Sequences:
>Translated_186_residues MEAPEILAALRTQANPVDVAGMARYGISTNGTLGVPVKALRELAKSIGRDHRLALDLWDSGIHEARILATIIDDPALVTK RQMDRWARDFDSWDVCDQACQNLFRYTPHAWEMAAKWSAARPEFVRRTGFALMAGLAVKSKSAPREYFESFLPLIAAAST DPRNMVKKSVAWARRTVTHRLAMSNS >Mature_186_residues MEAPEILAALRTQANPVDVAGMARYGISTNGTLGVPVKALRELAKSIGRDHRLALDLWDSGIHEARILATIIDDPALVTK RQMDRWARDFDSWDVCDQACQNLFRYTPHAWEMAAKWSAARPEFVRRTGFALMAGLAVKSKSAPREYFESFLPLIAAAST DPRNMVKKSVAWARRTVTHRLAMSNS
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20769; Mature: 20769
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAPEILAALRTQANPVDVAGMARYGISTNGTLGVPVKALRELAKSIGRDHRLALDLWDS CCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHC GIHEARILATIIDDPALVTKRQMDRWARDFDSWDVCDQACQNLFRYTPHAWEMAAKWSAA CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC RPEFVRRTGFALMAGLAVKSKSAPREYFESFLPLIAAASTDPRNMVKKSVAWARRTVTHR CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LAMSNS HHHCCC >Mature Secondary Structure MEAPEILAALRTQANPVDVAGMARYGISTNGTLGVPVKALRELAKSIGRDHRLALDLWDS CCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHC GIHEARILATIIDDPALVTKRQMDRWARDFDSWDVCDQACQNLFRYTPHAWEMAAKWSAA CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC RPEFVRRTGFALMAGLAVKSKSAPREYFESFLPLIAAASTDPRNMVKKSVAWARRTVTHR CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LAMSNS HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA