Click here to switch to the map view.

The map label for this gene is 116624027

Identifier: 116624027

GI number: 116624027

Start: 6234757

End: 6235536

Strand: Reverse

Name: 116624027

Synonym: Acid_4939

Alternate gene names: NA

Gene position: 6235536-6234757 (Counterclockwise)

Preceding gene: 116624035

Following gene: 116624023

Centisome position: 62.57

GC content: 63.72

Gene sequence:

>780_bases
ATGGGAGCGGCGAGTGCGCCGGCGCCGGCCGTGACGCCGCTGGACTATACGATTCAGGGAGACAATCTGCAGGTTGCGCG
GGTTCGTCTGAAGGCCGGGCAGGAGGTTTATGCCGAGGCCGGGAAGATGGTGTACAAGACCGCCAACGTGCAGTGGGACA
CGCGCATGAGCGGTGCTACGATCGGCGAAAAGCTGATGGGCGCGCTGCGGCGCACGGTGACGGGCGAATCGCTCTTCCTC
ACTTACTTCCGCGCGAATGGCGACGGCGAGGTGGGCTTCGCGGGCAACTATCCGGGACGGATTCAGGTCTTCGAACTGGC
GGCGGGGCGGTCTTTGATCGCGCAGCGGGATGCGTTCCTGTTCGCGCAGCCCACCGTGCAATTCAACATTGCGCTCGTGA
AGAAATTAGGCGCCGGATTCTTTGGCGGCGAGGGATTCATCCTCGAGAAATTCACGGGACCGGGCGCGGTGTTCATTCAT
GCGGGCGGCGATTTCGTGGAGTTCGATCTCGCGCCGGGACAGGTGATCCAGGTGGACACGGGCTGCATCGTGGCGTTCGA
TGAGACGGTGGATTATGACATCCAACTGGCGGGCGGGATCAAGACGGCGCTCTTCGGCGGCGAAGGACTGTTCCTGGCGA
CGCTGACCGGGCCGGGCAAGGTCGTGATCCAGAGCATGACCCTGAATAAGATGCGCCGCGAACTGGCGCCGGGCAGGACC
GGCGGCGACGAGCACAGTCCGCTGGGCGCGCTCGGGGGAATCTTTTCGTCGGAGGATTAA

Upstream 100 bases:

>100_bases
TTGTTAAAATTTCGTGATGGGCTACTGTACAGGTTGCGGATCACAGATCGTCGCGGGGGCGCGTTTTTGCTCCGTCTGCG
GCAAGCCGATGGCGGGGGAC

Downstream 100 bases:

>100_bases
GAAATCGATTGCAGCGCCGCTAACGAGTCCTGCACCGAGGGGCTGTTGCCGGCTTCGATATCTTTCCGCCGGAGCTGGTG
GAACTTCGTCAGAATGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MGAASAPAPAVTPLDYTIQGDNLQVARVRLKAGQEVYAEAGKMVYKTANVQWDTRMSGATIGEKLMGALRRTVTGESLFL
TYFRANGDGEVGFAGNYPGRIQVFELAAGRSLIAQRDAFLFAQPTVQFNIALVKKLGAGFFGGEGFILEKFTGPGAVFIH
AGGDFVEFDLAPGQVIQVDTGCIVAFDETVDYDIQLAGGIKTALFGGEGLFLATLTGPGKVVIQSMTLNKMRRELAPGRT
GGDEHSPLGALGGIFSSED

Sequences:

>Translated_259_residues
MGAASAPAPAVTPLDYTIQGDNLQVARVRLKAGQEVYAEAGKMVYKTANVQWDTRMSGATIGEKLMGALRRTVTGESLFL
TYFRANGDGEVGFAGNYPGRIQVFELAAGRSLIAQRDAFLFAQPTVQFNIALVKKLGAGFFGGEGFILEKFTGPGAVFIH
AGGDFVEFDLAPGQVIQVDTGCIVAFDETVDYDIQLAGGIKTALFGGEGLFLATLTGPGKVVIQSMTLNKMRRELAPGRT
GGDEHSPLGALGGIFSSED
>Mature_258_residues
GAASAPAPAVTPLDYTIQGDNLQVARVRLKAGQEVYAEAGKMVYKTANVQWDTRMSGATIGEKLMGALRRTVTGESLFLT
YFRANGDGEVGFAGNYPGRIQVFELAAGRSLIAQRDAFLFAQPTVQFNIALVKKLGAGFFGGEGFILEKFTGPGAVFIHA
GGDFVEFDLAPGQVIQVDTGCIVAFDETVDYDIQLAGGIKTALFGGEGLFLATLTGPGKVVIQSMTLNKMRRELAPGRTG
GDEHSPLGALGGIFSSED

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 27324; Mature: 27192

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAASAPAPAVTPLDYTIQGDNLQVARVRLKAGQEVYAEAGKMVYKTANVQWDTRMSGAT
CCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHCCEEEEEECCEEEECCCCCCH
IGEKLMGALRRTVTGESLFLTYFRANGDGEVGFAGNYPGRIQVFELAAGRSLIAQRDAFL
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEEEECCCHHHHCCCEEE
FAQPTVQFNIALVKKLGAGFFGGEGFILEKFTGPGAVFIHAGGDFVEFDLAPGQVIQVDT
EECCCEEEEHEEEHHHCCCEECCCCEEEEEECCCCEEEEECCCCEEEEECCCCCEEEEEC
GCIVAFDETVDYDIQLAGGIKTALFGGEGLFLATLTGPGKVVIQSMTLNKMRRELAPGRT
CEEEEEECCCCEEEEEECCEEEEEECCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCC
GGDEHSPLGALGGIFSSED
CCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
GAASAPAPAVTPLDYTIQGDNLQVARVRLKAGQEVYAEAGKMVYKTANVQWDTRMSGAT
CCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHCCEEEEEECCEEEECCCCCCH
IGEKLMGALRRTVTGESLFLTYFRANGDGEVGFAGNYPGRIQVFELAAGRSLIAQRDAFL
HHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEEEECCCHHHHCCCEEE
FAQPTVQFNIALVKKLGAGFFGGEGFILEKFTGPGAVFIHAGGDFVEFDLAPGQVIQVDT
EECCCEEEEHEEEHHHCCCEECCCCEEEEEECCCCEEEEECCCCEEEEECCCCCEEEEEC
GCIVAFDETVDYDIQLAGGIKTALFGGEGLFLATLTGPGKVVIQSMTLNKMRRELAPGRT
CEEEEEECCCCEEEEEECCEEEEEECCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCC
GGDEHSPLGALGGIFSSED
CCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA