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The map label for this gene is ydgJ [C]

Identifier: 116623906

GI number: 116623906

Start: 6089123

End: 6090427

Strand: Direct

Name: ydgJ [C]

Synonym: Acid_4818

Alternate gene names: 116623906

Gene position: 6089123-6090427 (Clockwise)

Preceding gene: 116623904

Following gene: 116623909

Centisome position: 61.1

GC content: 63.6

Gene sequence:

>1305_bases
TTGTCTCTGTTGATTGATCGCCGCACGATTCTGGCCGCGCCTTTCTTTATTCGCAATCTGATCTCCGCTCCGCCCAGCGG
GCAGGTGCGCCTGGGAGCTTTCGGCGCCGGCGGCATGGGGTTCGTGACGCTCGACGTTCTGGCGCGCCATCCAAAACTCA
AGGTGGCCTGCGTCGCCGAAGTCGATTCCGCCAAGCTCGATCAGCTCAAGGCAAAATATCCCGATGCGCGGGTCCATCAG
GACTGGCGCGTCATGCTCGCCAAGGAGCGCAAGAATATCGACGCCGTCTGCGTCGGCACGCCCGACCACATGCACGCTCC
CATGGCGATGTCGGCGATGCGCCTCGGGCTGCCGGTGTACCAGCAGAAGCCGATGGCGCACAGCATCGACGAGGTCCGGC
GCCTCACCGCTTTCGCGCACAAGAAGAACCTGATCACCCAGATGGGCATTCAGATTCACTCGAGCAAGGAATACCGCAGC
GCGGTGCAACTCGTCCAGTCGGGCGCCATCGGCAAGGTCAAAGAGGTTCACTCCTGGAGCGAAAAGAAGTGGGGCGATCC
CGATCCGCTGCCTACGCGGACCGACCCCGTGCCGGCGACGCTGAATTGGGATTACTGGATCGGCGTCGCCCAGCCGCGCC
CGTTCATCACGGACGTTTTCCATCCGCTGAACTGGCGTAAGCGCATCGATTTCGGCACCGCGACCTTCGGCGACATGGGC
TGCCACATCCTCGACCCGGTGTTTAGCGCGCTGGCGCTCTCCGCGCCGATCTCGGTTCGCTCCGAGGGACCCGCGCCGAA
TAAGGAGAGCTGGGCGCTCGACTCCGTCATTCAGTACGTGTTTCCAGCAACGAAGTTCACGGAGGGGAAGACCGTGCCGC
TCACCTGGTACGATGGCGACGCGCGCCCGCCGCAGGAAGTGCAGGCGCTCGCCGGTGCGCGCAAACTGCCCGGCCAGGGA
TCGCTGTTCATCGGCACCAAGGGACTGATGCTGTTGCCGCACGTCGGCATGCCCGTCCTGCTGCCGGAGGACCAATACCG
CGGCTACGAAATGCCGGCGCTCGAAGTGGTCAGCCACTACAACCAGTTCGTGGATGCCGTGCTCGGCAATGGCAAGACGA
CGGCGGGTTTCGATTATTCCGGACCGCTGACCGAGGCCGTCCTGCTTGGCCCGCTGGCGACGCGCATGCCGAAGACCACT
CTCGCCTGGAACTCCGCGAAGTTGCAGTTCACCAACTCGCCCGAAGCCAACCAGTACGTTCGGACCTCATATCGCGACGG
TTGGAAGGTGAAGGGCCTGGTCTAG

Upstream 100 bases:

>100_bases
CCACGCTGCCCTACGATGACCTTCGTAGTAGTCTTCGTCACAGGCCGGGTAAGAAGCCCGCCGAAAACTGAGACAATGTG
TGTTTTCCTGGAGAATACCA

Downstream 100 bases:

>100_bases
AATCACTACTCCAGCTCGAACGCGATTGTGACCGTCGTGATCACCTCCACCGGCTGTCCGTTGAGGAGCGTGGGTTGGTA
GCGCCACTGTTTCACTGCAT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dehydrogenase; Oxidoreductase; Dehydrogenase; NADH-Dependent Dyhydrogenase; Dehydrogenase-Like Protein; NADH-Dependent Dihydrogenase; Hydrogenase; NADH-Dependent Dehydrogenase-Like Protein; NADH-Dependent Deydrogenase; Gfo/Idh/MocA Family Oxidoreductase; Inositol 2-Dehydrogenase; Oxidoreductase-Like; Dehydrogenase And Relate Protein; Dehydrogenases Related Protein

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MSLLIDRRTILAAPFFIRNLISAPPSGQVRLGAFGAGGMGFVTLDVLARHPKLKVACVAEVDSAKLDQLKAKYPDARVHQ
DWRVMLAKERKNIDAVCVGTPDHMHAPMAMSAMRLGLPVYQQKPMAHSIDEVRRLTAFAHKKNLITQMGIQIHSSKEYRS
AVQLVQSGAIGKVKEVHSWSEKKWGDPDPLPTRTDPVPATLNWDYWIGVAQPRPFITDVFHPLNWRKRIDFGTATFGDMG
CHILDPVFSALALSAPISVRSEGPAPNKESWALDSVIQYVFPATKFTEGKTVPLTWYDGDARPPQEVQALAGARKLPGQG
SLFIGTKGLMLLPHVGMPVLLPEDQYRGYEMPALEVVSHYNQFVDAVLGNGKTTAGFDYSGPLTEAVLLGPLATRMPKTT
LAWNSAKLQFTNSPEANQYVRTSYRDGWKVKGLV

Sequences:

>Translated_434_residues
MSLLIDRRTILAAPFFIRNLISAPPSGQVRLGAFGAGGMGFVTLDVLARHPKLKVACVAEVDSAKLDQLKAKYPDARVHQ
DWRVMLAKERKNIDAVCVGTPDHMHAPMAMSAMRLGLPVYQQKPMAHSIDEVRRLTAFAHKKNLITQMGIQIHSSKEYRS
AVQLVQSGAIGKVKEVHSWSEKKWGDPDPLPTRTDPVPATLNWDYWIGVAQPRPFITDVFHPLNWRKRIDFGTATFGDMG
CHILDPVFSALALSAPISVRSEGPAPNKESWALDSVIQYVFPATKFTEGKTVPLTWYDGDARPPQEVQALAGARKLPGQG
SLFIGTKGLMLLPHVGMPVLLPEDQYRGYEMPALEVVSHYNQFVDAVLGNGKTTAGFDYSGPLTEAVLLGPLATRMPKTT
LAWNSAKLQFTNSPEANQYVRTSYRDGWKVKGLV
>Mature_433_residues
SLLIDRRTILAAPFFIRNLISAPPSGQVRLGAFGAGGMGFVTLDVLARHPKLKVACVAEVDSAKLDQLKAKYPDARVHQD
WRVMLAKERKNIDAVCVGTPDHMHAPMAMSAMRLGLPVYQQKPMAHSIDEVRRLTAFAHKKNLITQMGIQIHSSKEYRSA
VQLVQSGAIGKVKEVHSWSEKKWGDPDPLPTRTDPVPATLNWDYWIGVAQPRPFITDVFHPLNWRKRIDFGTATFGDMGC
HILDPVFSALALSAPISVRSEGPAPNKESWALDSVIQYVFPATKFTEGKTVPLTWYDGDARPPQEVQALAGARKLPGQGS
LFIGTKGLMLLPHVGMPVLLPEDQYRGYEMPALEVVSHYNQFVDAVLGNGKTTAGFDYSGPLTEAVLLGPLATRMPKTTL
AWNSAKLQFTNSPEANQYVRTSYRDGWKVKGLV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 47890; Mature: 47759

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLIDRRTILAAPFFIRNLISAPPSGQVRLGAFGAGGMGFVTLDVLARHPKLKVACVAE
CCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHEEHHHHHCCCCEEEEEEEC
VDSAKLDQLKAKYPDARVHQDWRVMLAKERKNIDAVCVGTPDHMHAPMAMSAMRLGLPVY
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHCCCHHHHHHHHCCCHH
QQKPMAHSIDEVRRLTAFAHKKNLITQMGIQIHSSKEYRSAVQLVQSGAIGKVKEVHSWS
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHH
EKKWGDPDPLPTRTDPVPATLNWDYWIGVAQPRPFITDVFHPLNWRKRIDFGTATFGDMG
HHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCHHHHHHCCCCCHHCCCCCCCCCCCCC
CHILDPVFSALALSAPISVRSEGPAPNKESWALDSVIQYVFPATKFTEGKTVPLTWYDGD
HHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC
ARPPQEVQALAGARKLPGQGSLFIGTKGLMLLPHVGMPVLLPEDQYRGYEMPALEVVSHY
CCCHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCEEEECCHHCCCCCCCHHHHHHHH
NQFVDAVLGNGKTTAGFDYSGPLTEAVLLGPLATRMPKTTLAWNSAKLQFTNSPEANQYV
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCCHHH
RTSYRDGWKVKGLV
HHHCCCCEEEECCC
>Mature Secondary Structure 
SLLIDRRTILAAPFFIRNLISAPPSGQVRLGAFGAGGMGFVTLDVLARHPKLKVACVAE
CEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHEEHHHHHCCCCEEEEEEEC
VDSAKLDQLKAKYPDARVHQDWRVMLAKERKNIDAVCVGTPDHMHAPMAMSAMRLGLPVY
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHCCCHHHHHHHHCCCHH
QQKPMAHSIDEVRRLTAFAHKKNLITQMGIQIHSSKEYRSAVQLVQSGAIGKVKEVHSWS
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHH
EKKWGDPDPLPTRTDPVPATLNWDYWIGVAQPRPFITDVFHPLNWRKRIDFGTATFGDMG
HHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCHHHHHHCCCCCHHCCCCCCCCCCCCC
CHILDPVFSALALSAPISVRSEGPAPNKESWALDSVIQYVFPATKFTEGKTVPLTWYDGD
HHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC
ARPPQEVQALAGARKLPGQGSLFIGTKGLMLLPHVGMPVLLPEDQYRGYEMPALEVVSHY
CCCHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCEEEECCHHCCCCCCCHHHHHHHH
NQFVDAVLGNGKTTAGFDYSGPLTEAVLLGPLATRMPKTTLAWNSAKLQFTNSPEANQYV
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCCHHH
RTSYRDGWKVKGLV
HHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA