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The map label for this gene is groS [H]

Identifier: 116623877

GI number: 116623877

Start: 6057089

End: 6057412

Strand: Direct

Name: groS [H]

Synonym: Acid_4789

Alternate gene names: 116623877

Gene position: 6057089-6057412 (Clockwise)

Preceding gene: 116623875

Following gene: 116623878

Centisome position: 60.78

GC content: 55.56

Gene sequence:

>324_bases
TTGGAACCTGCACAGCGCAACTGTATAATCATAAACATGGACTTAAGACCCTTGCATGACCGCGTGATGGTGAAGCGTTT
GGATGAAGGCGAGCAGGTGCGCGGCGGCATCATTATCCCCGACACGGCGAAGGAAAAGCCGCAGCAGGCCGAGGTTAAGG
CCGTGGGCAACGGCAAACTTCTGGAGAATGGCGAACGGGTGGCGCTCGATGTCAAAGCCGGGGATCGCATTCTGTTCGGA
AAGTACGGCGGCGCGGAGATCAAGATCGATGGTGAAGAATACCTGATCCTGCGTGAAGACGAGATTCTCGCGATTCTGGA
GTAG

Upstream 100 bases:

>100_bases
CATTTGCCCGCCGAATTGTAAATCTCGTGGACACCGCTTACAGGGAAATACGAGGCTGGCCCAGGATTCGGATGGCATCC
AGCGATAATCGGGTGAAGTC

Downstream 100 bases:

>100_bases
CGGGAACTTGGAATCGGCTGTGCTAGTCTAAGAGATTACACAAACAAATCAGGAGTTGTTTCATGTCTTTACGGTTGGCG
CTCAGACCGCTAGCGGTCTG

Product: chaperonin Cpn10

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MEPAQRNCIIINMDLRPLHDRVMVKRLDEGEQVRGGIIIPDTAKEKPQQAEVKAVGNGKLLENGERVALDVKAGDRILFG
KYGGAEIKIDGEEYLILREDEILAILE

Sequences:

>Translated_107_residues
MEPAQRNCIIINMDLRPLHDRVMVKRLDEGEQVRGGIIIPDTAKEKPQQAEVKAVGNGKLLENGERVALDVKAGDRILFG
KYGGAEIKIDGEEYLILREDEILAILE
>Mature_107_residues
MEPAQRNCIIINMDLRPLHDRVMVKRLDEGEQVRGGIIIPDTAKEKPQQAEVKAVGNGKLLENGERVALDVKAGDRILFG
KYGGAEIKIDGEEYLILREDEILAILE

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=52.0833333333333, Blast_Score=92, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17555568, Length=104, Percent_Identity=37.5, Blast_Score=79, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6324594, Length=89, Percent_Identity=41.5730337078652, Blast_Score=68, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21358317, Length=93, Percent_Identity=38.7096774193548, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356029, Length=94, Percent_Identity=35.1063829787234, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 11951; Mature: 11951

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPAQRNCIIINMDLRPLHDRVMVKRLDEGEQVRGGIIIPDTAKEKPQQAEVKAVGNGKL
CCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEE
LENGERVALDVKAGDRILFGKYGGAEIKIDGEEYLILREDEILAILE
EECCCEEEEEECCCCEEEEECCCCEEEEECCCEEEEEECCCEEEEEC
>Mature Secondary Structure
MEPAQRNCIIINMDLRPLHDRVMVKRLDEGEQVRGGIIIPDTAKEKPQQAEVKAVGNGKL
CCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEE
LENGERVALDVKAGDRILFGKYGGAEIKIDGEEYLILREDEILAILE
EECCCEEEEEECCCCEEEEECCCCEEEEECCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA