Click here to switch to the map view.

The map label for this gene is 116623836

Identifier: 116623836

GI number: 116623836

Start: 6006764

End: 6008242

Strand: Direct

Name: 116623836

Synonym: Acid_4748

Alternate gene names: NA

Gene position: 6006764-6008242 (Clockwise)

Preceding gene: 116623835

Following gene: 116623837

Centisome position: 60.27

GC content: 59.16

Gene sequence:

>1479_bases
TTGCGAGCCATTGTTCTCGCATTACTTTGCGTGGCCGGGTGCCAGCAACCTGCTTCGGCTCAGTCTGCTTCCGAGCGTAA
AATTCCGAGAACGTGGGACGAAGGGGAGCTTGAGAGTTGGACGATACCGGCTCGCGAGCCAAGCGCTTATACGGTTCATG
TTCCCTCGTCCTTCTACTACAACATTCCGGTTGCTCCGATTTACAAAAGCTATCCGATCTATCACCCGGAAAAGGAGCCG
CCCGGCTACATAGAGTGGCTCCAAAAGCAGGAGCCTCAAATCGTCTTCGATGCGTCAAAACTGCACACCGACCGGGAATG
GGTCGCCGCAGGAAAGCTGGTGTTCGAAGATCCGCGCGGCAGCGTTCCAGTTGGGATCTTCAGGGATGCGAGTTGGTATC
AGCAAGTGAAGATTCCGCTGACGTCTGACGGGATCGTTCCGGGTTGGCGGTACGTGGTGCGAAAAAGGGGAATCCTGGAG
GCTGGCTCCGCCTCTTGCTCTGCCTGCCACAGCCGGGTGATGCCGGATGGGAGCCTGCTCAATGGGCCGCAAACGAACTA
CCCCGCGGAACGGGACGCTGCCTGGGATATCCCCTCACAGCGAAATCTGCAGGATGCCCGCAAGTACACGTCGGGGCTGT
TTGGGCTGGTGTTCTCGCCCGGGTACAAATCATTTCTCGTAAATGAAACAGCGGAGCTGGACGTCGATCAGATCGCCGGA
ATCCGCGAGGCCATACCTCCGGGGGCGGTCCTGCGCGTGGGCGTCAGTGTCTCGACGCCGGTAAAGATAGCCGACCTCGT
CGGAGTGCGTGACCGGAGGTATCTGGACCTCATTGCCCGCGTACAGCACAGGAACATCGGCGACATGATGCGCTATGCCG
CGTTTGATCCGGGGGACGTCGTGTTTTTCTCTGATCGAAAGACGCTTCCCACGGAGATGCCGCTCCGCGCCTCTGGACTG
TCCCGGTTTAGCGACGAGCAGTTATTTGCCCTGGCCCTATATATCTATTCCCTGCAACCGCCGCCGAACCCAAACCGGCC
TGACAAACTCGCGAAGCGCGGTCAGAAGGTGTTCGAGCGCGAGGGATGCGCGGGATGCCATACTCCGCCGTTGTACACGA
ATAACAAGCTGACACTGGCCGGCGATTTCGAGCCTCCGGCGGAGCATCGTAGCAGGTACGACATCCTGCCTGTCAGGGTC
GGCACCGATCCGAGATCGGCCATGCAGGCCATGCGAGGGACGGGATATTACAAGGTGCCGTCCCTGAAAGGCGTGTGGTA
TCGCGGCCCGTTCGAACACAACGCGTCGGTCGCAACGCTGGAGGACTGGTTCGACGCGAGGCGCTTGCGGGACGACTATG
TCCCGACCGGATTCAAAGGGTATGGTGTAAAGACCCGCGCCGTCAGAGGGCATGAGTTCGGGTTGAAGTTATCGGGCGAA
GACAAGCGGGCATTGATGAGCTTTCTTCGAACGTTGTAG

Upstream 100 bases:

>100_bases
CGGAGCCGCGAACGGAACTAGCATTAGTCGCCTTTCAATTGAATGGCCGGGGAGACCTGCCACACCCGGGTGTATAATTG
GCTCCCGGGAGGGAGCTATA

Downstream 100 bases:

>100_bases
GTAAGAAGCCTAGATTAGTGGGACACGGTTGAAACCCCCACCCGCTCAACTTTGGTGGCCCGCAGGCCGGAGCGACAGGC
CGGGAGGGCCGGGAGGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MRAIVLALLCVAGCQQPASAQSASERKIPRTWDEGELESWTIPAREPSAYTVHVPSSFYYNIPVAPIYKSYPIYHPEKEP
PGYIEWLQKQEPQIVFDASKLHTDREWVAAGKLVFEDPRGSVPVGIFRDASWYQQVKIPLTSDGIVPGWRYVVRKRGILE
AGSASCSACHSRVMPDGSLLNGPQTNYPAERDAAWDIPSQRNLQDARKYTSGLFGLVFSPGYKSFLVNETAELDVDQIAG
IREAIPPGAVLRVGVSVSTPVKIADLVGVRDRRYLDLIARVQHRNIGDMMRYAAFDPGDVVFFSDRKTLPTEMPLRASGL
SRFSDEQLFALALYIYSLQPPPNPNRPDKLAKRGQKVFEREGCAGCHTPPLYTNNKLTLAGDFEPPAEHRSRYDILPVRV
GTDPRSAMQAMRGTGYYKVPSLKGVWYRGPFEHNASVATLEDWFDARRLRDDYVPTGFKGYGVKTRAVRGHEFGLKLSGE
DKRALMSFLRTL

Sequences:

>Translated_492_residues
MRAIVLALLCVAGCQQPASAQSASERKIPRTWDEGELESWTIPAREPSAYTVHVPSSFYYNIPVAPIYKSYPIYHPEKEP
PGYIEWLQKQEPQIVFDASKLHTDREWVAAGKLVFEDPRGSVPVGIFRDASWYQQVKIPLTSDGIVPGWRYVVRKRGILE
AGSASCSACHSRVMPDGSLLNGPQTNYPAERDAAWDIPSQRNLQDARKYTSGLFGLVFSPGYKSFLVNETAELDVDQIAG
IREAIPPGAVLRVGVSVSTPVKIADLVGVRDRRYLDLIARVQHRNIGDMMRYAAFDPGDVVFFSDRKTLPTEMPLRASGL
SRFSDEQLFALALYIYSLQPPPNPNRPDKLAKRGQKVFEREGCAGCHTPPLYTNNKLTLAGDFEPPAEHRSRYDILPVRV
GTDPRSAMQAMRGTGYYKVPSLKGVWYRGPFEHNASVATLEDWFDARRLRDDYVPTGFKGYGVKTRAVRGHEFGLKLSGE
DKRALMSFLRTL
>Mature_492_residues
MRAIVLALLCVAGCQQPASAQSASERKIPRTWDEGELESWTIPAREPSAYTVHVPSSFYYNIPVAPIYKSYPIYHPEKEP
PGYIEWLQKQEPQIVFDASKLHTDREWVAAGKLVFEDPRGSVPVGIFRDASWYQQVKIPLTSDGIVPGWRYVVRKRGILE
AGSASCSACHSRVMPDGSLLNGPQTNYPAERDAAWDIPSQRNLQDARKYTSGLFGLVFSPGYKSFLVNETAELDVDQIAG
IREAIPPGAVLRVGVSVSTPVKIADLVGVRDRRYLDLIARVQHRNIGDMMRYAAFDPGDVVFFSDRKTLPTEMPLRASGL
SRFSDEQLFALALYIYSLQPPPNPNRPDKLAKRGQKVFEREGCAGCHTPPLYTNNKLTLAGDFEPPAEHRSRYDILPVRV
GTDPRSAMQAMRGTGYYKVPSLKGVWYRGPFEHNASVATLEDWFDARRLRDDYVPTGFKGYGVKTRAVRGHEFGLKLSGE
DKRALMSFLRTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55129; Mature: 55129

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIVLALLCVAGCQQPASAQSASERKIPRTWDEGELESWTIPAREPSAYTVHVPSSFYY
CHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCEEE
NIPVAPIYKSYPIYHPEKEPPGYIEWLQKQEPQIVFDASKLHTDREWVAAGKLVFEDPRG
ECCCCCHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHCCCHHHHHCCCEEEECCCC
SVPVGIFRDASWYQQVKIPLTSDGIVPGWRYVVRKRGILEAGSASCSACHSRVMPDGSLL
CCCEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
NGPQTNYPAERDAAWDIPSQRNLQDARKYTSGLFGLVFSPGYKSFLVNETAELDVDQIAG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCHHEEECCCHHCCHHHHHH
IREAIPPGAVLRVGVSVSTPVKIADLVGVRDRRYLDLIARVQHRNIGDMMRYAAFDPGDV
HHHHCCCCCEEEEECCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCE
VFFSDRKTLPTEMPLRASGLSRFSDEQLFALALYIYSLQPPPNPNRPDKLAKRGQKVFER
EEECCCCCCCCCCCCCHHCCCCCCHHHHHHEEEEHHCCCCCCCCCCHHHHHHHHHHHHHH
EGCAGCHTPPLYTNNKLTLAGDFEPPAEHRSRYDILPVRVGTDPRSAMQAMRGTGYYKVP
CCCCCCCCCCCEECCEEEEEECCCCCHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEECC
SLKGVWYRGPFEHNASVATLEDWFDARRLRDDYVPTGFKGYGVKTRAVRGHEFGLKLSGE
CCCCEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCC
DKRALMSFLRTL
HHHHHHHHHHHC
>Mature Secondary Structure
MRAIVLALLCVAGCQQPASAQSASERKIPRTWDEGELESWTIPAREPSAYTVHVPSSFYY
CHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCEEE
NIPVAPIYKSYPIYHPEKEPPGYIEWLQKQEPQIVFDASKLHTDREWVAAGKLVFEDPRG
ECCCCCHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHCCCHHHHHCCCEEEECCCC
SVPVGIFRDASWYQQVKIPLTSDGIVPGWRYVVRKRGILEAGSASCSACHSRVMPDGSLL
CCCEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
NGPQTNYPAERDAAWDIPSQRNLQDARKYTSGLFGLVFSPGYKSFLVNETAELDVDQIAG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCHHEEECCCHHCCHHHHHH
IREAIPPGAVLRVGVSVSTPVKIADLVGVRDRRYLDLIARVQHRNIGDMMRYAAFDPGDV
HHHHCCCCCEEEEECCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCE
VFFSDRKTLPTEMPLRASGLSRFSDEQLFALALYIYSLQPPPNPNRPDKLAKRGQKVFER
EEECCCCCCCCCCCCCHHCCCCCCHHHHHHEEEEHHCCCCCCCCCCHHHHHHHHHHHHHH
EGCAGCHTPPLYTNNKLTLAGDFEPPAEHRSRYDILPVRVGTDPRSAMQAMRGTGYYKVP
CCCCCCCCCCCEECCEEEEEECCCCCHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEECC
SLKGVWYRGPFEHNASVATLEDWFDARRLRDDYVPTGFKGYGVKTRAVRGHEFGLKLSGE
CCCCEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCC
DKRALMSFLRTL
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA