| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116623789
GI number: 116623789
Start: 5951626
End: 5954283
Strand: Reverse
Name: macB [H]
Synonym: Acid_4701
Alternate gene names: 116623789
Gene position: 5954283-5951626 (Counterclockwise)
Preceding gene: 116623790
Following gene: 116623786
Centisome position: 59.75
GC content: 65.65
Gene sequence:
>2658_bases ATGTGGGGCAAGCGCAAACACTCGGATTTCCAGTCGGAAATCGAAGCTCACCTGCAATTGGAGGCCGACCGGCTGCGCGC CGAAGGACTGAACGCCGCGCAGGCCGAAATGGCGGCCCGGAAGGCGTTCGGCAACACGACCGCGGCGGAAGAGCGCTTCT ACGAATCCGGGAAATGGATGGTGTGGGACAACCTGGTGCGCGACATTCGTTATGCCGCGCGCATGCTCGCGAAGGATCCG CGGTTCAGCCTGCTGGCGATCCTCGGGCTGGCACTGGGAATCGCAGTGAGCACGTCGATCTTCACACTCATTCACGCGTC GCTGCGGTTGCGGGAAGTAGCGCAGGACCCCGCCTCGTACGTCGGGCTCACGCGGGTGGTTAACGGGCGCGCCACCGGCG GCTTCTCCTACCCCGAATACTTGTATTTCCGCGATCATTCCGCGACGTTTCGCGAGGTGACCGCGACTTCCGGGCGGGAA CGCTTTCTGATGACGCCGATTTCCGGCGGCGAGGCCGAAGAGGTGCGCGGCCGATTTCTTTCGGCGAACTTCCTGGGCAC GCCCGGTTTGCAGCCCGCGCTGGGAAGAAGTTTTTCCCCGGAGGAGGAACGGCCCGGCGGCACACCGGTCGCGCTGCTGG ATTTCCGTTTTTGGAAGAGCCGCTTTGGGTCCGACCCCGGCGTGCTCGGCAAGACCGTTATTCTCAACGCGCGTCCGCTG ATCGTCGTGGGCGTGGCCGCGGCGCGGTATGGCGCGGGCGACACGTCAGATCTCTATGTGCCACTAGGCATGCAACCGGC GCTGCTCGGCCGGGGAGACTGGCTGCGCGATGGCGCGGAACGCTGGCTCACGCTCGATGCGCGGATGAAGTCCGGGGTGT CCACGCCGCAGGCCCAGGCTGAAATGGATGTGCTTGCCGATTCCCTGCGGCGCGATATCCAGGCAGTTCCGGGCGAAGGC GGGGTTCGGGTGACCCCTGGCGGCGACAATCCCGAAAAGAGCAAAGAGATTCTGGCCATGGTTTTGATGGCCACGGTCGC GGTGTCGATGATCCTGTTAATCGCGTGCTCCAATCTCGCCAATCTGCTGCTGGCGCGGGCGGTGGTCCGCCAGCGGGAGA TCGGCGTCCGCCTGTCGCTGGGTGCGAGCCGGGCACGGCTGGTAGCTCAGTTATTAACCGAGAGTATGATTCTGGCGCTC GCCGGGGGACTGCTCGGACTTCTGTTCTCGCACTGGCTGGCGAAGGCGCTGATCGTGATGATGGACGCGCCGCCCGGGAT GGCGTTCGATCTGGGGATGGATCCGGTGGTAGTGCTGTATGCGTTCCTGCTTTCGGTCGCGACCGGCATCTCCTTCGGCC TGGCGCCGGCGCTGGCGGCTACCAGGACTAATCTTTCGCAGGCGCTGCATGCGGCGGGATTCCTTCAGGCTCCGTCGAGG CGGTCCAGGCTGTGGTCGGCGCGCAACGCGCTGGTGATCGTTCCGCTGGCCTTGTCGCTGATGCTCCTGCTGGGCGCGGG GGGCGCGCTGCGGCGCGTGCAGCGCAGGTTCATCAACGGCCCGGCGTTCGAAGCGGCGCACCTGGTGGAGGCATCGCTCC GTCTGAACATGCAGGGCTACGATCAACAACGGACGCTGCAGTTTCAGGAGAACCTGCGGCAGCGCATCGGCGGGATGCCG AACGTGACGTCGGTAGCGTTGGCCAGCGCGATGCCTCTTTCCAACGGCGTGGGATGGTTCCCGCTGGCCGTGGAAGGCGG CCGCGACACCGGCGGGCAACCAGCTCCGCACGCAGACTACAACGTAATTTCTCCCGAATTCTTCGAGACCGTGGGGGCGC GGGCGGTGCGCGGCCGCGCGTTCACGGCGAGTGATCGCGAGGGTTCTCCGCCGGTCGCAATGGTGAACCAGGACCTGGCC CGGCGCTACTGGCCGGACCAGGAGCCGATTGGCAAACGCCTGCGGCTGAGCGATTCGAAGGGACCTTACTTCGAGGTGAT CGGCGTGGCGCCGGACATGCAGGATGCGAGCAGCCCCCTGAATTCCGTGTTCCCCATCGTGTACGTTGCCGCCGCACAGG GTGCGCTGTTCCTAAAGGGCATGCGGACCGATCCGCCGGACTATCAGATGCAGTTCCTGGCACGAACCAGCGGGCCGCCG GCAGCGTTGAAGGCGGCGATCCGTCAGGAAGCGCACGCCACGGATTCTTCGCTGCGCATCAACGTGCAAACCATCGAAGA GTCGGTGGAGGCCCAGTTCGGACCTGTCAAGACGATCTCCATGCTGCTGGGCGCTTTGAGCGCGCTGGCGCTGTTGATGG CGGCGGTAGGGATTTACGCGGTTCTCTCGTATTCCGTCAGCCGGCGAACCCACGAGATCGGAATCCGCACGGCGTTGGGG GCGCAGCGGCGGGAAATTCTCGCGCTGGTTATGCAGCGTACGGCGGCGCTGGTGGCTTGGGGGATCGGACTGGGGCTCGG GGCCGCGCTGCTGCTGACGCGGATCTTCGCGCGGAGCTTCCACAAGCTCGGGCAACTGGATGCGGTTACGTGCGTGACGG TGTGCGCCGTGCTCGGCGGGTTTGCGCTGCTGGCCGGTTATTTGCCCGCGCGGAAGGCGCTGCGCGTGGATCCGCTGCAG GCGCTGCGCTGCGATTAG
Upstream 100 bases:
>100_bases CTCACGAAAGCGGGGAAAAAGCAGCTGATTCACGAGACCGGCCAGTGGCGGAAACTCGCGGCGGCGATCGGACGGGTCTT GGGACCGGAGGTGTGAAGGT
Downstream 100 bases:
>100_bases CATTCTGCTGAAATGCGGTGCATTCCTCGATCCGCCGAAGTGGCCGCTGCGATACCCTACTGATGGCGCAGCGAACTGAC CGGATCGACCCGTGAAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 885; Mature: 885
Protein sequence:
>885_residues MWGKRKHSDFQSEIEAHLQLEADRLRAEGLNAAQAEMAARKAFGNTTAAEERFYESGKWMVWDNLVRDIRYAARMLAKDP RFSLLAILGLALGIAVSTSIFTLIHASLRLREVAQDPASYVGLTRVVNGRATGGFSYPEYLYFRDHSATFREVTATSGRE RFLMTPISGGEAEEVRGRFLSANFLGTPGLQPALGRSFSPEEERPGGTPVALLDFRFWKSRFGSDPGVLGKTVILNARPL IVVGVAAARYGAGDTSDLYVPLGMQPALLGRGDWLRDGAERWLTLDARMKSGVSTPQAQAEMDVLADSLRRDIQAVPGEG GVRVTPGGDNPEKSKEILAMVLMATVAVSMILLIACSNLANLLLARAVVRQREIGVRLSLGASRARLVAQLLTESMILAL AGGLLGLLFSHWLAKALIVMMDAPPGMAFDLGMDPVVVLYAFLLSVATGISFGLAPALAATRTNLSQALHAAGFLQAPSR RSRLWSARNALVIVPLALSLMLLLGAGGALRRVQRRFINGPAFEAAHLVEASLRLNMQGYDQQRTLQFQENLRQRIGGMP NVTSVALASAMPLSNGVGWFPLAVEGGRDTGGQPAPHADYNVISPEFFETVGARAVRGRAFTASDREGSPPVAMVNQDLA RRYWPDQEPIGKRLRLSDSKGPYFEVIGVAPDMQDASSPLNSVFPIVYVAAAQGALFLKGMRTDPPDYQMQFLARTSGPP AALKAAIRQEAHATDSSLRINVQTIEESVEAQFGPVKTISMLLGALSALALLMAAVGIYAVLSYSVSRRTHEIGIRTALG AQRREILALVMQRTAALVAWGIGLGLGAALLLTRIFARSFHKLGQLDAVTCVTVCAVLGGFALLAGYLPARKALRVDPLQ ALRCD
Sequences:
>Translated_885_residues MWGKRKHSDFQSEIEAHLQLEADRLRAEGLNAAQAEMAARKAFGNTTAAEERFYESGKWMVWDNLVRDIRYAARMLAKDP RFSLLAILGLALGIAVSTSIFTLIHASLRLREVAQDPASYVGLTRVVNGRATGGFSYPEYLYFRDHSATFREVTATSGRE RFLMTPISGGEAEEVRGRFLSANFLGTPGLQPALGRSFSPEEERPGGTPVALLDFRFWKSRFGSDPGVLGKTVILNARPL IVVGVAAARYGAGDTSDLYVPLGMQPALLGRGDWLRDGAERWLTLDARMKSGVSTPQAQAEMDVLADSLRRDIQAVPGEG GVRVTPGGDNPEKSKEILAMVLMATVAVSMILLIACSNLANLLLARAVVRQREIGVRLSLGASRARLVAQLLTESMILAL AGGLLGLLFSHWLAKALIVMMDAPPGMAFDLGMDPVVVLYAFLLSVATGISFGLAPALAATRTNLSQALHAAGFLQAPSR RSRLWSARNALVIVPLALSLMLLLGAGGALRRVQRRFINGPAFEAAHLVEASLRLNMQGYDQQRTLQFQENLRQRIGGMP NVTSVALASAMPLSNGVGWFPLAVEGGRDTGGQPAPHADYNVISPEFFETVGARAVRGRAFTASDREGSPPVAMVNQDLA RRYWPDQEPIGKRLRLSDSKGPYFEVIGVAPDMQDASSPLNSVFPIVYVAAAQGALFLKGMRTDPPDYQMQFLARTSGPP AALKAAIRQEAHATDSSLRINVQTIEESVEAQFGPVKTISMLLGALSALALLMAAVGIYAVLSYSVSRRTHEIGIRTALG AQRREILALVMQRTAALVAWGIGLGLGAALLLTRIFARSFHKLGQLDAVTCVTVCAVLGGFALLAGYLPARKALRVDPLQ ALRCD >Mature_885_residues MWGKRKHSDFQSEIEAHLQLEADRLRAEGLNAAQAEMAARKAFGNTTAAEERFYESGKWMVWDNLVRDIRYAARMLAKDP RFSLLAILGLALGIAVSTSIFTLIHASLRLREVAQDPASYVGLTRVVNGRATGGFSYPEYLYFRDHSATFREVTATSGRE RFLMTPISGGEAEEVRGRFLSANFLGTPGLQPALGRSFSPEEERPGGTPVALLDFRFWKSRFGSDPGVLGKTVILNARPL IVVGVAAARYGAGDTSDLYVPLGMQPALLGRGDWLRDGAERWLTLDARMKSGVSTPQAQAEMDVLADSLRRDIQAVPGEG GVRVTPGGDNPEKSKEILAMVLMATVAVSMILLIACSNLANLLLARAVVRQREIGVRLSLGASRARLVAQLLTESMILAL AGGLLGLLFSHWLAKALIVMMDAPPGMAFDLGMDPVVVLYAFLLSVATGISFGLAPALAATRTNLSQALHAAGFLQAPSR RSRLWSARNALVIVPLALSLMLLLGAGGALRRVQRRFINGPAFEAAHLVEASLRLNMQGYDQQRTLQFQENLRQRIGGMP NVTSVALASAMPLSNGVGWFPLAVEGGRDTGGQPAPHADYNVISPEFFETVGARAVRGRAFTASDREGSPPVAMVNQDLA RRYWPDQEPIGKRLRLSDSKGPYFEVIGVAPDMQDASSPLNSVFPIVYVAAAQGALFLKGMRTDPPDYQMQFLARTSGPP AALKAAIRQEAHATDSSLRINVQTIEESVEAQFGPVKTISMLLGALSALALLMAAVGIYAVLSYSVSRRTHEIGIRTALG AQRREILALVMQRTAALVAWGIGLGLGAALLLTRIFARSFHKLGQLDAVTCVTVCAVLGGFALLAGYLPARKALRVDPLQ ALRCD
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=296, Percent_Identity=26.3513513513513, Blast_Score=93, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 95317; Mature: 95317
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGKRKHSDFQSEIEAHLQLEADRLRAEGLNAAQAEMAARKAFGNTTAAEERFYESGKWM CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEE VWDNLVRDIRYAARMLAKDPRFSLLAILGLALGIAVSTSIFTLIHASLRLREVAQDPASY EHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH VGLTRVVNGRATGGFSYPEYLYFRDHSATFREVTATSGRERFLMTPISGGEAEEVRGRFL HHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCHHHHCCCEE SANFLGTPGLQPALGRSFSPEEERPGGTPVALLDFRFWKSRFGSDPGVLGKTVILNARPL ECCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEECCCCE IVVGVAAARYGAGDTSDLYVPLGMQPALLGRGDWLRDGAERWLTLDARMKSGVSTPQAQA EEEEEHHHHCCCCCCCCEEEECCCCCHHCCCCCHHHHHHHHHEEEHHHHHCCCCCCHHHH EMDVLADSLRRDIQAVPGEGGVRVTPGGDNPEKSKEILAMVLMATVAVSMILLIACSNLA HHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLLARAVVRQREIGVRLSLGASRARLVAQLLTESMILALAGGLLGLLFSHWLAKALIVM HHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE MDAPPGMAFDLGMDPVVVLYAFLLSVATGISFGLAPALAATRTNLSQALHAAGFLQAPSR ECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RSRLWSARNALVIVPLALSLMLLLGAGGALRRVQRRFINGPAFEAAHLVEASLRLNMQGY HHHHHHHCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC DQQRTLQFQENLRQRIGGMPNVTSVALASAMPLSNGVGWFPLAVEGGRDTGGQPAPHADY CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCC NVISPEFFETVGARAVRGRAFTASDREGSPPVAMVNQDLARRYWPDQEPIGKRLRLSDSK CCCCHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCC GPYFEVIGVAPDMQDASSPLNSVFPIVYVAAAQGALFLKGMRTDPPDYQMQFLARTSGPP CCEEEEEECCCCCHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCH AALKAAIRQEAHATDSSLRINVQTIEESVEAQFGPVKTISMLLGALSALALLMAAVGIYA HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLSYSVSRRTHEIGIRTALGAQRREILALVMQRTAALVAWGIGLGLGAALLLTRIFARSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKLGQLDAVTCVTVCAVLGGFALLAGYLPARKALRVDPLQALRCD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC >Mature Secondary Structure MWGKRKHSDFQSEIEAHLQLEADRLRAEGLNAAQAEMAARKAFGNTTAAEERFYESGKWM CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEE VWDNLVRDIRYAARMLAKDPRFSLLAILGLALGIAVSTSIFTLIHASLRLREVAQDPASY EHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH VGLTRVVNGRATGGFSYPEYLYFRDHSATFREVTATSGRERFLMTPISGGEAEEVRGRFL HHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCHHHHCCCEE SANFLGTPGLQPALGRSFSPEEERPGGTPVALLDFRFWKSRFGSDPGVLGKTVILNARPL ECCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEECCCCE IVVGVAAARYGAGDTSDLYVPLGMQPALLGRGDWLRDGAERWLTLDARMKSGVSTPQAQA EEEEEHHHHCCCCCCCCEEEECCCCCHHCCCCCHHHHHHHHHEEEHHHHHCCCCCCHHHH EMDVLADSLRRDIQAVPGEGGVRVTPGGDNPEKSKEILAMVLMATVAVSMILLIACSNLA HHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLLARAVVRQREIGVRLSLGASRARLVAQLLTESMILALAGGLLGLLFSHWLAKALIVM HHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE MDAPPGMAFDLGMDPVVVLYAFLLSVATGISFGLAPALAATRTNLSQALHAAGFLQAPSR ECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RSRLWSARNALVIVPLALSLMLLLGAGGALRRVQRRFINGPAFEAAHLVEASLRLNMQGY HHHHHHHCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC DQQRTLQFQENLRQRIGGMPNVTSVALASAMPLSNGVGWFPLAVEGGRDTGGQPAPHADY CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCC NVISPEFFETVGARAVRGRAFTASDREGSPPVAMVNQDLARRYWPDQEPIGKRLRLSDSK CCCCHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCC GPYFEVIGVAPDMQDASSPLNSVFPIVYVAAAQGALFLKGMRTDPPDYQMQFLARTSGPP CCEEEEEECCCCCHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCH AALKAAIRQEAHATDSSLRINVQTIEESVEAQFGPVKTISMLLGALSALALLMAAVGIYA HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLSYSVSRRTHEIGIRTALGAQRREILALVMQRTAALVAWGIGLGLGAALLLTRIFARSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKLGQLDAVTCVTVCAVLGGFALLAGYLPARKALRVDPLQALRCD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]