| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623692
Identifier: 116623692
GI number: 116623692
Start: 5817856
End: 5820702
Strand: Direct
Name: 116623692
Synonym: Acid_4604
Alternate gene names: NA
Gene position: 5817856-5820702 (Clockwise)
Preceding gene: 116623691
Following gene: 116623693
Centisome position: 58.38
GC content: 65.54
Gene sequence:
>2847_bases GTGACGCGCCTGGGACTCCTCGCACTCTTTGCGGCAGCCGCGCTCGCGGCTGCCGTCCCACCTTCGGACTACGGAAAACT CCCCCTCCATTTTGAAGAGAACCGCGGGCAGACCGACGCGCGCGTGCGCTACCTCGCGCGCTCGGCCGATCGCACGCTGT TTCTCACCGCCGATGGCGCGGTCCTGAGCGCCGGCGGCGTTGCCGTGCGCCTGCGCCTGCGCGGAATCGACCGGCGGGCG TCGATCGAAGGCATCGATCGGCAGGCCGGCGTCAGCAACTATCTCGGCCGCCGGCCGCTCACGGCTGTCCCGCAGTTCGC GCGCGTGCGTTATCGCAATGCGTGGCCGGGAATCGACGTAGTCTTCTATGGGACGGCCGGCCAGTTGGAATACGACTTTA TCGTCGCTCCGGGAGCCGACCCGCGCCGCATCCGGCTCGAGTTCGAAGGCGCCGGCACCCTTCGCCGCGAGGCCGGCGAC CTGGTGTTCAGTACTGCCGCCGGCGAACTGCGCCAGCGCGCTCCCATGATTTACCAGGCCGGCAGGCAAGTGGGCGGCGG CTACACGCTGCACGGACAGCAGGTGGGCTTTGCGCTCGCTGCGTACGATCGCACCCAGCCGCTGGTGATCGACCCGATGC TGACTTACAATGCGCGCTTCGGAGCGCGCGGCCCTTCGTTCAACACCACCGTTCCCGGCCTGAATGGCTTCGACCGCGGC GGCGCGGCGATCGCGGCGGATGCCGCCGGGAATGCTTACGTCGTCGGCGCGGCATACACCGCCGATTTTCCCTCGACTCC CGGCGTGTTCCAGCCGGCCTTGCACACCGGAACCGGCGGCGCTGGTGGAATTCAGCCCAACGACGTCTTCGTGATGAAGC TGAATTCCACCGGCTCGGCGCTGGTCTACTCCACCTTCCTCGGCGGCGCCGGCGATGACGTTTCCACCGGGATCGCGCTC GATCCCGATGGCAATGTCTATCTGTGCGGCACCACCAACTCCGCGGATTTTCCGACCACGCCGGGCGCTTTCATCGCCGC CTCGCCGATCCCCGGAGGGTATACCGGGTTCGTCGCCAAGATCGACGCGGACGCGACCAAATTGCTGTACTCCACCTACC TCGGGGGCACGTCGATCGCCACCGACATCCGCGGCATCGCGATCGATAGCGCGCGCAATATGTACGTTACCGGCGTCACC GGCGGCGTCAACTTTCCAGTAACTCCGGGCGCCTTCCGCACCACTGCCCCGCAGTTCGCGTTCAGCGCCTTCGTCACCAA ATTCAATGCCGCCGGCACCGCGCTGGTCTATTCGACGTTTCTCGGCATGGCGTCCGGCAATTTCGGGTCGGCGCAGCCTC CCATCGCCAACATGGGCATCGCGGTGGACAGCACCGGCAATGCCTACGTCGGCGGCTTCACGGGCGACCGGAGTTTCCCC ACCACCAGCGGCGCCTTTCAACCCGCCATCAACCAGACCGTGGCCGGGAGCGGCTTCGTCACCAAGCTCAATGCCGCCGG CAGCGATCTGATCTTCTCGACTTATCTCGGCGGCAGTTATTACGACGGCGTGGATGCGCTGGCGCTCGGCCCCGATGGCA GCGTCTACGTGACCGGCCACGCATCGTCCACCAATTTCCCGACCACGGCGGGAGCCTTCATGACGGCGCCGAATCCCGAG TTTCCCGCCGGCACCGTGATTCGCTATCCGCCGTACGGCTTTGTCTCGCGGCTCAAGCCCGATGGCAGCGGCCTCATTTA TTCGACGTACATCGGCGGTGGCGGCAGCATCATCATGGGAGCCATCGCGGTAGATCCGCAGGGGAACGCCTTCGTGATCG GCGCGGCCGATTCCACCAGCTTCCCCACGACTCCCGGCGCCATCCAGCCCTGCCTCGAAGATCCCAGCGGGTTTTCCAAC GCGATCCTTTTTAAGCTCGATCCCAACGGCAGCCGCCTGCTGTACTCGACATTCCTCGGCGGCAACGTCCGCGATCAGGG CTTCGGAATTGCCCTGGATAAGGATGGCAATGCCTACGTCACCGGCATGAGCGATTCCACCACATTTGTAACCACGCCGG GCGCGGCTGGTATCCCGACCGGGCAGGCTTTCATCGCCAAGGTCAATTTCGCAACACCCACGCCCGCTGGCGTGACCTGC GTTGCCAATACGGCTAGTATGGTCCCAGGTCCGGTAGCGGCAGGCGAGATCGTGAGCATCTTCGGCACCGGACTCGGCCC CGCGGACCCGCAGAGCGGCGTCGTCGTCAACGGCGCGTTCACCACTTCGCTGGGCGGCACCCGGCTGCTGTTCGATGGCG TCGCCGCGCCGCTGCTGATGGTCTCCGGAAATCAGATCAACGCCATTGTGCCCTCGCCCGTAAGGTTCCGCGCGCAGACC GTGATGCAGGTCGAAGTCGGCGGCAAGCTCTTCCCCGCCCAGACGCTGGATGTCGCGATCTCTTCGCCAGCCGTCTTTAC GGTAAACGGCACCGGCACGGGATGGGCAGCGGCCCTCAATCAGGATGGCACCGTAAACTCGCCGGCGAACCCAGCGGCGC GCGGCTCGGTGGTCTGGCTGTTCGCCAATAGCGCCGGCCCCTGGCAGCCCGTGCTCGGCGATGGACTCGTGCTCGCCGAC GCGCACCCGATCCAGATCTTCCCCACCGTCCAACTCAGCACCAACCAAGTACCCGTGAATTATAACGGCAATTCGCCCGG CTCGGTCACCGCTCTCTGGCAGTTGAATGTCTTCATTCCGCAGACCCTGTTCCCTTCCACCGCCCTGCAAGTACACATCA CCGGCCCGAACGCCCTCACCCAACGGGTCACAATCGCGATCAAGTAA
Upstream 100 bases:
>100_bases ACGTACAAAATGACCCTCGCCTCCGCCGGCGGCAACAAGGGCACCCTCACCCTGGAATGGGAAAACAAGAAAGCCAGCGT GGATTTCACGGCAAAGTAAC
Downstream 100 bases:
>100_bases GTTGCGCGCGACACCCGCTTCTGGTATACCTGTTCACCATTACCTTTCCCCACGTCCGGGCAACGTAAAAAGGGGTTAGC AATGTATTTACCTACGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 948; Mature: 947
Protein sequence:
>948_residues MTRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGAVLSAGGVAVRLRLRGIDRRA SIEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDVVFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGD LVFSTAAGELRQRAPMIYQAGRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRG GAAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSALVYSTFLGGAGDDVSTGIAL DPDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAKIDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVT GGVNFPVTPGAFRTTAPQFAFSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFP TTSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGHASSTNFPTTAGAFMTAPNPE FPAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMGAIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSN AILFKLDPNGSRLLYSTFLGGNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTC VANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLMVSGNQINAIVPSPVRFRAQT VMQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALNQDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLAD AHPIQIFPTVQLSTNQVPVNYNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK
Sequences:
>Translated_948_residues MTRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGAVLSAGGVAVRLRLRGIDRRA SIEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDVVFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGD LVFSTAAGELRQRAPMIYQAGRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRG GAAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSALVYSTFLGGAGDDVSTGIAL DPDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAKIDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVT GGVNFPVTPGAFRTTAPQFAFSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFP TTSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGHASSTNFPTTAGAFMTAPNPE FPAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMGAIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSN AILFKLDPNGSRLLYSTFLGGNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTC VANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLMVSGNQINAIVPSPVRFRAQT VMQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALNQDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLAD AHPIQIFPTVQLSTNQVPVNYNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK >Mature_947_residues TRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGAVLSAGGVAVRLRLRGIDRRAS IEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDVVFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGDL VFSTAAGELRQRAPMIYQAGRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRGG AAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSALVYSTFLGGAGDDVSTGIALD PDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAKIDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVTG GVNFPVTPGAFRTTAPQFAFSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFPT TSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGHASSTNFPTTAGAFMTAPNPEF PAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMGAIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSNA ILFKLDPNGSRLLYSTFLGGNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTCV ANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLMVSGNQINAIVPSPVRFRAQTV MQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALNQDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLADA HPIQIFPTVQLSTNQVPVNYNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97374; Mature: 97242
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGA CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCC VLSAGGVAVRLRLRGIDRRASIEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDV EEECCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCHHCCHHHHHEECCCCCCEEE VFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGDLVFSTAAGELRQRAPMIYQA EEECCCCCEEEEEEECCCCCCEEEEEEECCCCCEECCCCCEEEEECHHHHHHHCCHHHHH GRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRG CHHCCCCEEEECCCCEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCC GAAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSA CCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCE LVYSTFLGGAGDDVSTGIALDPDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAK EEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEE IDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVTGGVNFPVTPGAFRTTAPQFA ECCCHHHHHHHHHCCCCCHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHH FSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFP HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEECCCCEEEECCCCCCCCC TTSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGH CCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEC ASSTNFPTTAGAFMTAPNPEFPAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMG CCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCEEEE AIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSNAILFKLDPNGSRLLYSTFLG EEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEEECC GNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTC CCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEE VANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLM EECCHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEE VSGNQINAIVPSPVRFRAQTVMQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALN EECCEEEEECCCCCEEEEEEEEEEEECCEECCCCEEEEEECCCEEEEEECCCCCEEEEEC QDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLADAHPIQIFPTVQLSTNQVPVN CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCEEEEE YNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK ECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEC >Mature Secondary Structure TRLGLLALFAAAALAAAVPPSDYGKLPLHFEENRGQTDARVRYLARSADRTLFLTADGA CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCC VLSAGGVAVRLRLRGIDRRASIEGIDRQAGVSNYLGRRPLTAVPQFARVRYRNAWPGIDV EEECCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCHHCCHHHHHEECCCCCCEEE VFYGTAGQLEYDFIVAPGADPRRIRLEFEGAGTLRREAGDLVFSTAAGELRQRAPMIYQA EEECCCCCEEEEEEECCCCCCEEEEEEECCCCCEECCCCCEEEEECHHHHHHHCCHHHHH GRQVGGGYTLHGQQVGFALAAYDRTQPLVIDPMLTYNARFGARGPSFNTTVPGLNGFDRG CHHCCCCEEEECCCCEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCC GAAIAADAAGNAYVVGAAYTADFPSTPGVFQPALHTGTGGAGGIQPNDVFVMKLNSTGSA CCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCE LVYSTFLGGAGDDVSTGIALDPDGNVYLCGTTNSADFPTTPGAFIAASPIPGGYTGFVAK EEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEE IDADATKLLYSTYLGGTSIATDIRGIAIDSARNMYVTGVTGGVNFPVTPGAFRTTAPQFA ECCCHHHHHHHHHCCCCCHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHH FSAFVTKFNAAGTALVYSTFLGMASGNFGSAQPPIANMGIAVDSTGNAYVGGFTGDRSFP HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEECCCCEEEECCCCCCCCC TTSGAFQPAINQTVAGSGFVTKLNAAGSDLIFSTYLGGSYYDGVDALALGPDGSVYVTGH CCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEC ASSTNFPTTAGAFMTAPNPEFPAGTVIRYPPYGFVSRLKPDGSGLIYSTYIGGGGSIIMG CCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCEEEE AIAVDPQGNAFVIGAADSTSFPTTPGAIQPCLEDPSGFSNAILFKLDPNGSRLLYSTFLG EEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEEECC GNVRDQGFGIALDKDGNAYVTGMSDSTTFVTTPGAAGIPTGQAFIAKVNFATPTPAGVTC CCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEE VANTASMVPGPVAAGEIVSIFGTGLGPADPQSGVVVNGAFTTSLGGTRLLFDGVAAPLLM EECCHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEE VSGNQINAIVPSPVRFRAQTVMQVEVGGKLFPAQTLDVAISSPAVFTVNGTGTGWAAALN EECCEEEEECCCCCEEEEEEEEEEEECCEECCCCEEEEEECCCEEEEEECCCCCEEEEEC QDGTVNSPANPAARGSVVWLFANSAGPWQPVLGDGLVLADAHPIQIFPTVQLSTNQVPVN CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCEEEEE YNGNSPGSVTALWQLNVFIPQTLFPSTALQVHITGPNALTQRVTIAIK ECCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA