| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623622
Identifier: 116623622
GI number: 116623622
Start: 5731893
End: 5732630
Strand: Direct
Name: 116623622
Synonym: Acid_4532
Alternate gene names: NA
Gene position: 5731893-5732630 (Clockwise)
Preceding gene: 116623618
Following gene: 116623623
Centisome position: 57.52
GC content: 66.8
Gene sequence:
>738_bases GTGAAGCGCCATTGTAGCCGATGGCGCGCGGGACGTTTTTCGGCCGCCGCCGTCTATCCCACGAACATGCGCCTCGCATT TCTCACGTTGATCGGGGTGTTGTGCCACGCCGAGCCCGCCGAGGGCCGCTGGGAGGGCACGATCCAGATCCCCGGCACGC CGCTCGCCGCGATTATCGATCTCGCGCAATCGGCCGGCGCGTGGATTGGTTCCGCGACCGTCCCCGGCTTCACCAAGGGC GCTCCGCTCGCCGACATCGTTGTCCGGGATTCGGCGGTCTCGTTTACGCTCAAGGGCGCGCTCGGCGATCCGAAATTCAG CGGCCGCGTGGACGCTGGCACGTTCGATGGCAGCTTCGTCCAGGCCGGAAATTCCGCCGCCTTTCACCTGCGCCAGGCAG GGGCGCCCCAGGTGGATCTGCCGCGCCAAAGCACCGCGGTCGCGGCCGAACTCGCGGGCGAATGGCAGGGGGAATTCACG CTTGCCGGCAACAAGCTCAAGGCATTGCTCAAGCTCACCAATTCGGCGGGGGGCGCGGCGGCCGCGCAGTTCGTGATCAC CGGCAGGCGCGAAACCAACGTCCCGATCGACCTGGTGCGCCAGGAGGGCGAGTTCCTCACGGTGGTCTCGTCTCAGTACC GCATCAGCTTCGAAGGGCGGTGGCAGAAAGACGAATTGAACGGCACGTTCGCGCAGGGTCCGATCGAAAGCCCGCTGAGC TTACGGAGGGCGCGGTGA
Upstream 100 bases:
>100_bases TGATCCAGCCATCGCTGTCGGCGGCGATCATGCAGGGCGCCAGCAGGGCGATGGCGGCTACGCATAGCGGAAAGGTCTTC ATGGTTCGTCTCCTTGGAAT
Downstream 100 bases:
>100_bases GGATGCGCCTCTCCCTCACCGTACTGGCTGCGGCGGCCTGCTTCGGGCAAGCGACATTCCGCGGTGATGCGGCGCACTCC GGCGCGTTCTCCGGCGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKRHCSRWRAGRFSAAAVYPTNMRLAFLTLIGVLCHAEPAEGRWEGTIQIPGTPLAAIIDLAQSAGAWIGSATVPGFTKG APLADIVVRDSAVSFTLKGALGDPKFSGRVDAGTFDGSFVQAGNSAAFHLRQAGAPQVDLPRQSTAVAAELAGEWQGEFT LAGNKLKALLKLTNSAGGAAAAQFVITGRRETNVPIDLVRQEGEFLTVVSSQYRISFEGRWQKDELNGTFAQGPIESPLS LRRAR
Sequences:
>Translated_245_residues MKRHCSRWRAGRFSAAAVYPTNMRLAFLTLIGVLCHAEPAEGRWEGTIQIPGTPLAAIIDLAQSAGAWIGSATVPGFTKG APLADIVVRDSAVSFTLKGALGDPKFSGRVDAGTFDGSFVQAGNSAAFHLRQAGAPQVDLPRQSTAVAAELAGEWQGEFT LAGNKLKALLKLTNSAGGAAAAQFVITGRRETNVPIDLVRQEGEFLTVVSSQYRISFEGRWQKDELNGTFAQGPIESPLS LRRAR >Mature_245_residues MKRHCSRWRAGRFSAAAVYPTNMRLAFLTLIGVLCHAEPAEGRWEGTIQIPGTPLAAIIDLAQSAGAWIGSATVPGFTKG APLADIVVRDSAVSFTLKGALGDPKFSGRVDAGTFDGSFVQAGNSAAFHLRQAGAPQVDLPRQSTAVAAELAGEWQGEFT LAGNKLKALLKLTNSAGGAAAAQFVITGRRETNVPIDLVRQEGEFLTVVSSQYRISFEGRWQKDELNGTFAQGPIESPLS LRRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26052; Mature: 26052
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHCSRWRAGRFSAAAVYPTNMRLAFLTLIGVLCHAEPAEGRWEGTIQIPGTPLAAIID CCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH LAQSAGAWIGSATVPGFTKGAPLADIVVRDSAVSFTLKGALGDPKFSGRVDAGTFDGSFV HHHHCCCEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCEECCCCCCCCEE QAGNSAAFHLRQAGAPQVDLPRQSTAVAAELAGEWQGEFTLAGNKLKALLKLTNSAGGAA ECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCE AAQFVITGRRETNVPIDLVRQEGEFLTVVSSQYRISFEGRWQKDELNGTFAQGPIESPLS EEEEEEECCCCCCCCCEEEECCCCEEEEEECCEEEEECCCCCHHHCCCEECCCCCCCCHH LRRAR HHCCC >Mature Secondary Structure MKRHCSRWRAGRFSAAAVYPTNMRLAFLTLIGVLCHAEPAEGRWEGTIQIPGTPLAAIID CCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH LAQSAGAWIGSATVPGFTKGAPLADIVVRDSAVSFTLKGALGDPKFSGRVDAGTFDGSFV HHHHCCCEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCEECCCCCCCCEE QAGNSAAFHLRQAGAPQVDLPRQSTAVAAELAGEWQGEFTLAGNKLKALLKLTNSAGGAA ECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCCE AAQFVITGRRETNVPIDLVRQEGEFLTVVSSQYRISFEGRWQKDELNGTFAQGPIESPLS EEEEEEECCCCCCCCCEEEECCCCEEEEEECCEEEEECCCCCHHHCCCEECCCCCCCCHH LRRAR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA