Click here to switch to the map view.

The map label for this gene is 116623496

Identifier: 116623496

GI number: 116623496

Start: 5576415

End: 5577269

Strand: Reverse

Name: 116623496

Synonym: Acid_4406

Alternate gene names: NA

Gene position: 5577269-5576415 (Counterclockwise)

Preceding gene: 116623498

Following gene: 116623495

Centisome position: 55.96

GC content: 58.71

Gene sequence:

>855_bases
ATGAAAATCGAAACATCGCGCCGCAATTTTTTGGGTGCCGCCGCCGGAGTCGCCGGTCTGAGCGTCATCGGAGCCCCGCC
TGCCTCCGCCGTGATCGAAGCCGAGCCTTGGGGGATCAAACTGGGGATTGCCACGTATTCCCTGCGCAGCTTCGACCGCG
CTACCGCGATCGACATGCTGAAGAAAATGGGCGTCAAGTACGTCAGTATTAAAGACATCCACATGAAGATCGGCGCGCCG
CCCGAAGAGACCAAGGCCGCGGCCGCGGAATTCCGCAATGCCGGTTTCATCGTCACCAGCGGCGGTAACGTGGATATGAC
CAAGGGCACCACGGTTGACGATCTGCGCAAGCAGTTCGACTACGCCAAGGCCGCCGGGCTACCGATGATGGTCTGCGCCC
CTACGCACGAGAACATCAAAGCGGTGGAAACCCTCGTTAAGGAATATGACATCCGCATCGCCATTCACAATCACGGCCCC
GAGGATAAACATTTCCCCACGCCGCAATCCGTACTCGACGTGGTTCGCAAACTGGACAAGCGCTGCGGCCTTTGCATGGA
CGTCGGCCACTCCGCCCGCACCGGCATCGATGTGGTGGAGACCATCGCTCTGGCGGGCGACCGCCTCTTCGATATGCACG
TGAAAGATCTGCGCAATATGAAGGAAAAGGACAGCCAGTGCGATATCGGCGACGGCCTCATGCCTTTCCCACGCATTTAC
AAGCAGCTCAAGAAAATGGGTTATACCGGCTGCGTCAACATGGAGTACGAGATCAACGCCAAAGATCCCATGATGGGCAT
GCAGCGCTCTCTCAGCTATCAGCGAGGCGTCCTGGCCGGCCTAGCCTCAGCGTAA

Upstream 100 bases:

>100_bases
CCAACATCCATTCCAGGCGAAGGGGCGAAATCTCGCGTTAGCCGGAGTACAAACTGCGTGAGGGGGAGTAGAATTGAATA
TTTAACGGGAGAAACGGACC

Downstream 100 bases:

>100_bases
GCCTATGGCGAACATCCCAATCGGCACCCGTGGTGAACAGAAGCGTCTGGTCACCACGGAAAATGCCATCAGTTTCCTGG
GCGTGGAGGGTGCGCGAGTG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain-Containing Protein; Xylose Isomerase-Like Protein; Sugar Phosphate Isomerases/Epimerases

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKIETSRRNFLGAAAGVAGLSVIGAPPASAVIEAEPWGIKLGIATYSLRSFDRATAIDMLKKMGVKYVSIKDIHMKIGAP
PEETKAAAAEFRNAGFIVTSGGNVDMTKGTTVDDLRKQFDYAKAAGLPMMVCAPTHENIKAVETLVKEYDIRIAIHNHGP
EDKHFPTPQSVLDVVRKLDKRCGLCMDVGHSARTGIDVVETIALAGDRLFDMHVKDLRNMKEKDSQCDIGDGLMPFPRIY
KQLKKMGYTGCVNMEYEINAKDPMMGMQRSLSYQRGVLAGLASA

Sequences:

>Translated_284_residues
MKIETSRRNFLGAAAGVAGLSVIGAPPASAVIEAEPWGIKLGIATYSLRSFDRATAIDMLKKMGVKYVSIKDIHMKIGAP
PEETKAAAAEFRNAGFIVTSGGNVDMTKGTTVDDLRKQFDYAKAAGLPMMVCAPTHENIKAVETLVKEYDIRIAIHNHGP
EDKHFPTPQSVLDVVRKLDKRCGLCMDVGHSARTGIDVVETIALAGDRLFDMHVKDLRNMKEKDSQCDIGDGLMPFPRIY
KQLKKMGYTGCVNMEYEINAKDPMMGMQRSLSYQRGVLAGLASA
>Mature_284_residues
MKIETSRRNFLGAAAGVAGLSVIGAPPASAVIEAEPWGIKLGIATYSLRSFDRATAIDMLKKMGVKYVSIKDIHMKIGAP
PEETKAAAAEFRNAGFIVTSGGNVDMTKGTTVDDLRKQFDYAKAAGLPMMVCAPTHENIKAVETLVKEYDIRIAIHNHGP
EDKHFPTPQSVLDVVRKLDKRCGLCMDVGHSARTGIDVVETIALAGDRLFDMHVKDLRNMKEKDSQCDIGDGLMPFPRIY
KQLKKMGYTGCVNMEYEINAKDPMMGMQRSLSYQRGVLAGLASA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30995; Mature: 30995

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIETSRRNFLGAAAGVAGLSVIGAPPASAVIEAEPWGIKLGIATYSLRSFDRATAIDML
CCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHH
KKMGVKYVSIKDIHMKIGAPPEETKAAAAEFRNAGFIVTSGGNVDMTKGTTVDDLRKQFD
HHCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCEEECCCCCHHHHHHHHH
YAKAAGLPMMVCAPTHENIKAVETLVKEYDIRIAIHNHGPEDKHFPTPQSVLDVVRKLDK
HHHHCCCCEEEECCCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
RCGLCMDVGHSARTGIDVVETIALAGDRLFDMHVKDLRNMKEKDSQCDIGDGLMPFPRIY
HCCCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
KQLKKMGYTGCVNMEYEINAKDPMMGMQRSLSYQRGVLAGLASA
HHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIETSRRNFLGAAAGVAGLSVIGAPPASAVIEAEPWGIKLGIATYSLRSFDRATAIDML
CCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHH
KKMGVKYVSIKDIHMKIGAPPEETKAAAAEFRNAGFIVTSGGNVDMTKGTTVDDLRKQFD
HHCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCEEECCCCCHHHHHHHHH
YAKAAGLPMMVCAPTHENIKAVETLVKEYDIRIAIHNHGPEDKHFPTPQSVLDVVRKLDK
HHHHCCCCEEEECCCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
RCGLCMDVGHSARTGIDVVETIALAGDRLFDMHVKDLRNMKEKDSQCDIGDGLMPFPRIY
HCCCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
KQLKKMGYTGCVNMEYEINAKDPMMGMQRSLSYQRGVLAGLASA
HHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA