Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116623490

Identifier: 116623490

GI number: 116623490

Start: 5568586

End: 5570694

Strand: Direct

Name: 116623490

Synonym: Acid_4400

Alternate gene names: NA

Gene position: 5568586-5570694 (Clockwise)

Preceding gene: 116623489

Following gene: 116623491

Centisome position: 55.88

GC content: 57.85

Gene sequence:

>2109_bases
ATGCAAGCGAAATTGGCTGTTCTGACGGGCATATTCTGCCTGGCATACGTTGCTGAAATCCTGCCGGGACAAGAGAAGGA
AGACCGGACGTTGTTATCACAGCAACAGATGACCGCCATTATTAATGAAGTCTCGGGCGAGCGCGCTTTGCATCACGTGC
TGGAATTGGTCCCGTATCAGTTCGTCCGGCCGCCGGCCGAATATCAAGGCCACTTCCGCGAGTCGGAGGTCATGGCGAAG
CTTGCCAGGGAATATGGCTTCAGCAATGTTGCGATCGAAGATTATCCCACCGGACAGACCTATCAGCCAATCGTTGGCGA
ATTATGGACGACCGCGCCAAAGAGCGTGAAGCTTTACGACATTCACGACATACCGGAATCGCTTGCCTCAACGAATGCAA
ACGGGGATATCAGCGGTGAACTGGTCAACGTGGGACAAGGTGCGGCCCAGGATTTCGAAGGCAAGGACATCAAAGGCAAG
TTCGTATTGTCGCTCGCGCCAAGTGGTCTTACCGGCATTTATGGACGGGCGGTTGCGGCCGGGGCAATCGGTATCGTCGG
GATCAGCGCGATCGGCGCAGGCGACCGTTCAACGGACTACCCGGAGCAAATCGTGTCAACAACCGTGAACGCCCAGCCGA
ACACCGCGGCGTGGGCCGTATCCCCGAGAGTGGCGCGCGAACTCGAAACGATGCTCAATCGCGGACAGAAGGTCTCGATT
CGATCCATCACCAAGAGCCAACAGGTGCCGAACAAGCAGGAAATCGTGCATGCCGAGATTCCGGGCGATGGCAGCACTAC
GCAGGAAGTAGCCATCGGCGGCCACCTGTTCGAGGGGTACATCAAGCAAGGCGCCAACGACGATAATTCCGGTTGCGCTT
TGACCCTTGAGATCGGCCGCGCCTATCTCAAGCTCATCGCAGAGGGAAAGCTGCCGCGTCCCAAACGGACCATCAACTTT
CAATGGGTCCAGGAGATCAGCGGCACCAACGCCTGGTTTAATGCCCACCCGGACAAGCAGAAGGTGATCATTGGCGATCT
GAACTTCGATATGGAGGGACTTCGCCTTACCCAGAGCCGCAGCTATTGGGTGCTCCATCGCACTCCGGATACCTTCCCCT
CATATATCAACGACATTGCCCAGAGCATGATGGAATACGTCGCCGAGATTTCTCGGGAACGTGTCCGATACCGCCGGGAT
GGCTATGGCGCAACGCAGCCGGTCGAATCGCCCAATGGAAGCAGAGATGCTTTTTATATCAAGATCGACAAGCACTATGG
CTCGAGTGACCATGTGACTTACATGCAGCATGGCATTCCCGCGGTCATCTTTAATACCTGGCCGGACATGTGGTATCACT
CCTCGCAAGATACGCCGGACAAGCAGGATCCCACCCAGTACAAACGTGCGGCGGCTGTCGGGACGGGAGTATTGGCCGCT
CTTGCATCGGGTACGGAGGAGATGGCTGCGCGGATTCTGAGCGAAAACCTCGGCCGCGGCCTGGAGAGGATGGGCGAGTC
GCACACCAAAGGGCTAGGCTATATGGCCGACGCAGCGAACGCGACTGCATTAACGGATGGTTACAGAGAAGCGAGAATCG
CCATTCTCCATCAAACGGAAGTCGAGAAGGGCGTCGTGGGATCCGCGAGCATTTTGTGGACGAACGTCGACAGCGGTAAG
CGGAAGACAGCTTCCTTTGCGCCCCTGATCGACCAGCGCGCCGCATTGCTGTTGAACGAGGTGAAGGCGGCGTATCAACT
CCAGGCGCTACAGCGTGGCGTACCACCTTCCGAACCTGTCTTGACAACAGAGGAACGCGAAGCTGCCAATCTGATGGTTG
AATCCTTGGGCGGTGGCGGGCGCGGTGGTGCTGGTGGCGACGGGCGCGGCGGTGGCGGCGCACGCGGTGGCGGTAATGCC
GGTCCCGCGCTTCCACAGGAAATGAATGCTGAATTTGCGATCCTGCTCGGCCGACATATGACCGCTTTGGAGATTCGCGA
CTTCTTATCCGGCGAGTTCACCCCCCTGCCGCTCGCCGATTTGATGGCGGTGCTGCGCGCGAGAGAAACTGCCGGCAGCA
TCAAGCTGGTCCCCAAGACGGGTAAATAG

Upstream 100 bases:

>100_bases
GTAGGATTCGCCGGCACGCACTTCGCCGCGACCGGCGCGCCAGCAAATTGCGGAGGCCGTTCCGAATGGGTTAGGATTGA
CGCTCCGAGAGGTGAGGGGC

Downstream 100 bases:

>100_bases
GAAGCCCCTGTTTCACTAAATTCGCGGCCGAAGAAATGGATTGGCTCTGAATTCCCGTGCTCAACGATAAAACTCGGCGG
CGATTCGCTCGCCGCAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQFVRPPAEYQGHFRESEVMAK
LAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYDIHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGK
FVLSLAPSGLTGIYGRAVAAGAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI
RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGRAYLKLIAEGKLPRPKRTINF
QWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSRSYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRD
GYGATQPVESPNGSRDAFYIKIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA
LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTEVEKGVVGSASILWTNVDSGK
RKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPVLTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNA
GPALPQEMNAEFAILLGRHMTALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK

Sequences:

>Translated_702_residues
MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQFVRPPAEYQGHFRESEVMAK
LAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYDIHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGK
FVLSLAPSGLTGIYGRAVAAGAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI
RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGRAYLKLIAEGKLPRPKRTINF
QWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSRSYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRD
GYGATQPVESPNGSRDAFYIKIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA
LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTEVEKGVVGSASILWTNVDSGK
RKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPVLTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNA
GPALPQEMNAEFAILLGRHMTALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK
>Mature_702_residues
MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQFVRPPAEYQGHFRESEVMAK
LAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYDIHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGK
FVLSLAPSGLTGIYGRAVAAGAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI
RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGRAYLKLIAEGKLPRPKRTINF
QWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSRSYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRD
GYGATQPVESPNGSRDAFYIKIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA
LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTEVEKGVVGSASILWTNVDSGK
RKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPVLTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNA
GPALPQEMNAEFAILLGRHMTALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75952; Mature: 75952

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQ
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHH
FVRPPAEYQGHFRESEVMAKLAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYD
HCCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCEEEEE
IHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGKFVLSLAPSGLTGIYGRAVAA
CHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
GAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI
HHHHHHEEHEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEH
RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGR
HHHHHHHCCCCHHHEEEEECCCCCCCCHHEECCHHHHHHHHHCCCCCCCCCCEEEEHHHH
AYLKLIAEGKLPRPKRTINFQWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSR
HHHHHHHCCCCCCCCCEECHHHHHHCCCCCCEECCCCCCCEEEEEECCCCCCCEEEECCC
SYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRDGYGATQPVESPNGSRDAFYI
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
KIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA
EEECCCCCCCCEEHHHCCCCEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTE
HHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECCCCCCCHHHCCHHHHEEEEEEHHH
VEKGVVGSASILWTNVDSGKRKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPV
HHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
LTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNAGPALPQEMNAEFAILLGRHM
ECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCH
TALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC
>Mature Secondary Structure
MQAKLAVLTGIFCLAYVAEILPGQEKEDRTLLSQQQMTAIINEVSGERALHHVLELVPYQ
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHH
FVRPPAEYQGHFRESEVMAKLAREYGFSNVAIEDYPTGQTYQPIVGELWTTAPKSVKLYD
HCCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCEEEEE
IHDIPESLASTNANGDISGELVNVGQGAAQDFEGKDIKGKFVLSLAPSGLTGIYGRAVAA
CHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
GAIGIVGISAIGAGDRSTDYPEQIVSTTVNAQPNTAAWAVSPRVARELETMLNRGQKVSI
HHHHHHEEHEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEH
RSITKSQQVPNKQEIVHAEIPGDGSTTQEVAIGGHLFEGYIKQGANDDNSGCALTLEIGR
HHHHHHHCCCCHHHEEEEECCCCCCCCHHEECCHHHHHHHHHCCCCCCCCCCEEEEHHHH
AYLKLIAEGKLPRPKRTINFQWVQEISGTNAWFNAHPDKQKVIIGDLNFDMEGLRLTQSR
HHHHHHHCCCCCCCCCEECHHHHHHCCCCCCEECCCCCCCEEEEEECCCCCCCEEEECCC
SYWVLHRTPDTFPSYINDIAQSMMEYVAEISRERVRYRRDGYGATQPVESPNGSRDAFYI
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
KIDKHYGSSDHVTYMQHGIPAVIFNTWPDMWYHSSQDTPDKQDPTQYKRAAAVGTGVLAA
EEECCCCCCCCEEHHHCCCCEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LASGTEEMAARILSENLGRGLERMGESHTKGLGYMADAANATALTDGYREARIAILHQTE
HHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECCCCCCCHHHCCHHHHEEEEEEHHH
VEKGVVGSASILWTNVDSGKRKTASFAPLIDQRAALLLNEVKAAYQLQALQRGVPPSEPV
HHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
LTTEEREAANLMVESLGGGGRGGAGGDGRGGGGARGGGNAGPALPQEMNAEFAILLGRHM
ECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCH
TALEIRDFLSGEFTPLPLADLMAVLRARETAGSIKLVPKTGK
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA