Click here to switch to the map view.

The map label for this gene is 116623476

Identifier: 116623476

GI number: 116623476

Start: 5548965

End: 5549900

Strand: Reverse

Name: 116623476

Synonym: Acid_4386

Alternate gene names: NA

Gene position: 5549900-5548965 (Counterclockwise)

Preceding gene: 116623477

Following gene: 116623475

Centisome position: 55.69

GC content: 56.84

Gene sequence:

>936_bases
ATGGACTTCCATCAACTGTGGACCATTCTCAGCACACCGGACAACGTCCCGATTGTGATTCTGCTGCTGGTTGTCCCGTT
CTACACGTGGTATGGGCTGCGGCAATCCTTCGCCAATGACCGGCTGATTGCGCAGCTGGAGGCCAACCCGGAAATGGCCA
AGACGCATCACCGCAAGACGCAGCCGTGGCGTCCGGAGTGGGCGCGCGAAGTCCACGTGTGGCCGTACCTGCTGCGCATC
GAATTTCTGGCGGCGATCATTCTGACGATCATCCTCATGGTCTGGTCGATCACGTTGAACGCGCCGCTCGAAGAGCCGGC
AAATCCGACGCTTACGATGAACCCATCGAAGGCGCCGTGGTATTTCCTGGGGCTGCAGGAGATGCTGGTGTACTTTGACC
CGTGGATTGCGGGGGTAGTGATGCCTTCGCTGATCATCGTCGGCCTGATGGTGATTCCGTATATCGACACCAATCCGCTG
GGCAACGGATATTACACGTATAAGCAGCGCAAGTTTTCGATTCTGACGTTCATTTTCGGATTCATCGTGCTGTGGGTGAC
GATGATCGTGATCGGGACGCTGATTCGCGGTCCGGGCTGGATGTGGTTCTGGCCGGGGACCACGTGGGATCACAACCGGC
TGATCTTTGAGGTGAACCGCGATTTGCCGGACATATTCGGCATTCACACGCGCGTGCCCAAGATGATATTCGGAGCCATT
GCGGTGGGCGCCTTCTGCGCGGGCGCGGCGGTGTTGATGCACAAGCTGATCACGCTTACGCCGTTCAATCGGAAGATCTA
TGCGCGGATGAGCGTCCTTCAGTACGCGACGATGCAAGTCTTCCTGGTGGTGATGCTGTCGCTGCCGGTAAAGATTCTGA
TCCGCCTGCTGTTCCGCATTAAGTACGTGTTTGTCTCACCCTGGTTCAATATATAG

Upstream 100 bases:

>100_bases
GATCGTGCACTTCTGGCGAGTGCGTAAAGACGGCGGAATTTCCGGACCGGCGCCGATGATGCTGGAAAGCGAAATCAAGG
AACCCAAGAAGGTTTAGATT

Downstream 100 bases:

>100_bases
GCGAATTTATGAGCGATCAAGATAAGGACCCGGTAGTCCACTCGTCACTGAGCAAACCGCTATACATATCGTCGGTGCTG
CTGGTGCTCTCGATGGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome B/B6 Domain-Containing Protein; Cytochrome B/B6-Like

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MDFHQLWTILSTPDNVPIVILLLVVPFYTWYGLRQSFANDRLIAQLEANPEMAKTHHRKTQPWRPEWAREVHVWPYLLRI
EFLAAIILTIILMVWSITLNAPLEEPANPTLTMNPSKAPWYFLGLQEMLVYFDPWIAGVVMPSLIIVGLMVIPYIDTNPL
GNGYYTYKQRKFSILTFIFGFIVLWVTMIVIGTLIRGPGWMWFWPGTTWDHNRLIFEVNRDLPDIFGIHTRVPKMIFGAI
AVGAFCAGAAVLMHKLITLTPFNRKIYARMSVLQYATMQVFLVVMLSLPVKILIRLLFRIKYVFVSPWFNI

Sequences:

>Translated_311_residues
MDFHQLWTILSTPDNVPIVILLLVVPFYTWYGLRQSFANDRLIAQLEANPEMAKTHHRKTQPWRPEWAREVHVWPYLLRI
EFLAAIILTIILMVWSITLNAPLEEPANPTLTMNPSKAPWYFLGLQEMLVYFDPWIAGVVMPSLIIVGLMVIPYIDTNPL
GNGYYTYKQRKFSILTFIFGFIVLWVTMIVIGTLIRGPGWMWFWPGTTWDHNRLIFEVNRDLPDIFGIHTRVPKMIFGAI
AVGAFCAGAAVLMHKLITLTPFNRKIYARMSVLQYATMQVFLVVMLSLPVKILIRLLFRIKYVFVSPWFNI
>Mature_311_residues
MDFHQLWTILSTPDNVPIVILLLVVPFYTWYGLRQSFANDRLIAQLEANPEMAKTHHRKTQPWRPEWAREVHVWPYLLRI
EFLAAIILTIILMVWSITLNAPLEEPANPTLTMNPSKAPWYFLGLQEMLVYFDPWIAGVVMPSLIIVGLMVIPYIDTNPL
GNGYYTYKQRKFSILTFIFGFIVLWVTMIVIGTLIRGPGWMWFWPGTTWDHNRLIFEVNRDLPDIFGIHTRVPKMIFGAI
AVGAFCAGAAVLMHKLITLTPFNRKIYARMSVLQYATMQVFLVVMLSLPVKILIRLLFRIKYVFVSPWFNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36160; Mature: 36160

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFHQLWTILSTPDNVPIVILLLVVPFYTWYGLRQSFANDRLIAQLEANPEMAKTHHRKT
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCC
QPWRPEWAREVHVWPYLLRIEFLAAIILTIILMVWSITLNAPLEEPANPTLTMNPSKAPW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCE
YFLGLQEMLVYFDPWIAGVVMPSLIIVGLMVIPYIDTNPLGNGYYTYKQRKFSILTFIFG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHH
FIVLWVTMIVIGTLIRGPGWMWFWPGTTWDHNRLIFEVNRDLPDIFGIHTRVPKMIFGAI
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
AVGAFCAGAAVLMHKLITLTPFNRKIYARMSVLQYATMQVFLVVMLSLPVKILIRLLFRI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KYVFVSPWFNI
HHHHCCCCCCC
>Mature Secondary Structure
MDFHQLWTILSTPDNVPIVILLLVVPFYTWYGLRQSFANDRLIAQLEANPEMAKTHHRKT
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCC
QPWRPEWAREVHVWPYLLRIEFLAAIILTIILMVWSITLNAPLEEPANPTLTMNPSKAPW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCE
YFLGLQEMLVYFDPWIAGVVMPSLIIVGLMVIPYIDTNPLGNGYYTYKQRKFSILTFIFG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHH
FIVLWVTMIVIGTLIRGPGWMWFWPGTTWDHNRLIFEVNRDLPDIFGIHTRVPKMIFGAI
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
AVGAFCAGAAVLMHKLITLTPFNRKIYARMSVLQYATMQVFLVVMLSLPVKILIRLLFRI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KYVFVSPWFNI
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA