Click here to switch to the map view.

The map label for this gene is amzA [H]

Identifier: 116623301

GI number: 116623301

Start: 5333132

End: 5333692

Strand: Direct

Name: amzA [H]

Synonym: Acid_4208

Alternate gene names: 116623301

Gene position: 5333132-5333692 (Clockwise)

Preceding gene: 116623300

Following gene: 116623302

Centisome position: 53.52

GC content: 64.71

Gene sequence:

>561_bases
GTGAAACCGATTCACCTGATTCCGCTCGCCAATGGGAGCGGTCCGCTGGAACCAGGCCTGGATGTGCTGGAGCACCTGGC
GGCGAACCTCGCACGCACCTTCCGGACGCCGTGCCGCATCCGTCCGGAGACCTTCGATCTGGGCTTCGCGCTCGACCCCG
GCCGGCATCAGTACTACTCGACCGCGATTCTCCAGCGGCTCGAGCGTGCCGCCGATCCCGATGCCCGCGTGCTCGGCGTC
ACTGCGTGCGATCTCTACGTGCCGGTGTTGACCTTCGTCTTCGGAGAGGCGCAGTTGGATGGTAATTGCGCCGTGGTCTC
CACCGCCCGCCTCAACGAAGAGTTTTACGGCCTGCCCACGCGCGCCGAACTCGTCCGCGAGCGTCTCCTCAAAGAGGCCG
CCCACGAATTGGGCCACACCTTCGGCCTCCGCCATTGCAACGACTGGCGCTGCGTGATGAGTTCCAGCCACGCCGTCGAA
CGCCTTGATGTCAAAACCGCCGAGTTCTGTGACGCCTGCCGCAAGCCCGTCCAGAGCAACGGATTTTGGGCCCGAATCTG
A

Upstream 100 bases:

>100_bases
GCATCCTTAGGGAGACGCAGCACAATCTTTCGCGCGCGGCCCGGATCCTGGACATCGATCGCACCACGCTCTACAACAAG
CTGCGCCGCTACGGTCTAAG

Downstream 100 bases:

>100_bases
CAGCTTCCAACCTACACTGGTAGACGGATGGAGCGTATCCGCATCCGCGTGCAGGGCATTGTGCAGGGCGTCGGCTTCCG
GCCCTTCGTCTACAACCTCG

Product: peptidase, zinc-dependent

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKPIHLIPLANGSGPLEPGLDVLEHLAANLARTFRTPCRIRPETFDLGFALDPGRHQYYSTAILQRLERAADPDARVLGV
TACDLYVPVLTFVFGEAQLDGNCAVVSTARLNEEFYGLPTRAELVRERLLKEAAHELGHTFGLRHCNDWRCVMSSSHAVE
RLDVKTAEFCDACRKPVQSNGFWARI

Sequences:

>Translated_186_residues
MKPIHLIPLANGSGPLEPGLDVLEHLAANLARTFRTPCRIRPETFDLGFALDPGRHQYYSTAILQRLERAADPDARVLGV
TACDLYVPVLTFVFGEAQLDGNCAVVSTARLNEEFYGLPTRAELVRERLLKEAAHELGHTFGLRHCNDWRCVMSSSHAVE
RLDVKTAEFCDACRKPVQSNGFWARI
>Mature_186_residues
MKPIHLIPLANGSGPLEPGLDVLEHLAANLARTFRTPCRIRPETFDLGFALDPGRHQYYSTAILQRLERAADPDARVLGV
TACDLYVPVLTFVFGEAQLDGNCAVVSTARLNEEFYGLPTRAELVRERLLKEAAHELGHTFGLRHCNDWRCVMSSSHAVE
RLDVKTAEFCDACRKPVQSNGFWARI

Specific function: Probable zinc metalloprotease [H]

COG id: COG1913

COG function: function code R; Predicted Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M54 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012962
- InterPro:   IPR012091 [H]

Pfam domain/function: PF07998 Peptidase_M54 [H]

EC number: NA

Molecular weight: Translated: 20759; Mature: 20759

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIHLIPLANGSGPLEPGLDVLEHLAANLARTFRTPCRIRPETFDLGFALDPGRHQYYS
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHH
TAILQRLERAADPDARVLGVTACDLYVPVLTFVFGEAQLDGNCAVVSTARLNEEFYGLPT
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCEECCCEEEEEHHHHCHHHCCCCH
RAELVRERLLKEAAHELGHTFGLRHCNDWRCVMSSSHAVERLDVKTAEFCDACRKPVQSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHCHHHCC
GFWARI
CCEECC
>Mature Secondary Structure
MKPIHLIPLANGSGPLEPGLDVLEHLAANLARTFRTPCRIRPETFDLGFALDPGRHQYYS
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHH
TAILQRLERAADPDARVLGVTACDLYVPVLTFVFGEAQLDGNCAVVSTARLNEEFYGLPT
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCEECCCEEEEEHHHHCHHHCCCCH
RAELVRERLLKEAAHELGHTFGLRHCNDWRCVMSSSHAVERLDVKTAEFCDACRKPVQSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHCHHHCC
GFWARI
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]